Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21241447
Identifier: 21241447
GI number: 21241447
Start: 801950
End: 803014
Strand: Direct
Name: 21241447
Synonym: XAC0676
Alternate gene names: NA
Gene position: 801950-803014 (Clockwise)
Preceding gene: 21241446
Following gene: 21241448
Centisome position: 15.49
GC content: 68.36
Gene sequence:
>1065_bases ATGGATGAGTTCGATCAGCGCAGTTGGTGGACGCCGGTCCCGGACGATGCCGCCTGGGCGCTGCCCGACGATCTGCGCGC GGCCGACCCGCTCGGCGGGCGCGATTGTGGCTGGGTCAATCAGATACGCCCGTTTGTGCGCCATTTCAGCCGGCCGGGCG AGCAGGTGTTCGACCCGTTCTGTGGCTTTGGCAGCAGCTTGCTGGCGGCCGCGCTGGAAGGCCGCAACGCGCATGGCATG GAAATCGATCCGGCACGCGCGCAGTTGGCACGTGCGCGTCTGCAGCGGCATGCGGTGGAGGCGCCGGTGGTGGTCGGCAG CCTGGCCGTTAACGCGCCGGCAGGGCCGATCGACCTGTGTCTGACCAACGTGCCGTATTTCGGCTGCCACTGGCGTGGCG ACGTGCTGCCTGGGCAGCTTTACGCAAGCAGCGATTACGCCAGCTATCTGACCGGCATGCGTGCGGTCTTCCATGCGCTG CGCAAGCAGATGCGGCCCGACGGCGTGGGCGTGGCGATGGTGCAGAACGTGGTGGTCGGCGGCCGCGTGATCCCGCAGGC CTGGGATCTGGGCCGCATCCTGGCCAGCCTGTTCACCCTGCGCGAGGAGCGGGTGCTGTGCTATCGGCGTCCGGCCGCCG CGCTGGCGCATGCCGAGACACAGAGCAATCGCAGCCACGAATACGCGCTGATCTTTCAGCATTGTCGTGCCCGGCTGGAT CTGCAGCAGGCCGCGCAATTGCTGCAGGCGGTGCAGGCACAGGGCCTGCCGGTGGTGGTGCATGGCAGCTACGCGCGCTG GCTGGCGTCGCCGACCCTGGTGCCCGACGGTCCGGCCGATCTGGACCTGATGCTGCATGGCGAACAAGCGCTGTGGGACC GCCTTACCCTCTGGCTGCAGCAACAGGGCTTCGCGTTGAGCCTGTGGGGCGAACCGTGCCGTGCGCCGGTGGCACTGGCG GTGGTGCGTGCGCACCGTTACCTGCGCGCCGAGCGCATCGGTGCCGATGGCCGCCGCCTGCAGATAGACCTGCAATTGCC AGTGGATGAACCGCCGTTGCCCTGA
Upstream 100 bases:
>100_bases CGTCACGCGACCGGCGATCTGTACAAGCTGGTGTTCTTCGCCAACGGTCGTCTCTGTGCGGGCTGGGACCCGGATGCCGA TGTTTTGTGGGAACCCATCG
Downstream 100 bases:
>100_bases CCCGGCAACGCGACGCCGCGCGCACATGGGTTGCCGCTATGCTCTGTGCCGGTTTTGGATGCCGGAATCTCTCTATGTCT TGTTCTTCCCTGATCGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MDEFDQRSWWTPVPDDAAWALPDDLRAADPLGGRDCGWVNQIRPFVRHFSRPGEQVFDPFCGFGSSLLAAALEGRNAHGM EIDPARAQLARARLQRHAVEAPVVVGSLAVNAPAGPIDLCLTNVPYFGCHWRGDVLPGQLYASSDYASYLTGMRAVFHAL RKQMRPDGVGVAMVQNVVVGGRVIPQAWDLGRILASLFTLREERVLCYRRPAAALAHAETQSNRSHEYALIFQHCRARLD LQQAAQLLQAVQAQGLPVVVHGSYARWLASPTLVPDGPADLDLMLHGEQALWDRLTLWLQQQGFALSLWGEPCRAPVALA VVRAHRYLRAERIGADGRRLQIDLQLPVDEPPLP
Sequences:
>Translated_354_residues MDEFDQRSWWTPVPDDAAWALPDDLRAADPLGGRDCGWVNQIRPFVRHFSRPGEQVFDPFCGFGSSLLAAALEGRNAHGM EIDPARAQLARARLQRHAVEAPVVVGSLAVNAPAGPIDLCLTNVPYFGCHWRGDVLPGQLYASSDYASYLTGMRAVFHAL RKQMRPDGVGVAMVQNVVVGGRVIPQAWDLGRILASLFTLREERVLCYRRPAAALAHAETQSNRSHEYALIFQHCRARLD LQQAAQLLQAVQAQGLPVVVHGSYARWLASPTLVPDGPADLDLMLHGEQALWDRLTLWLQQQGFALSLWGEPCRAPVALA VVRAHRYLRAERIGADGRRLQIDLQLPVDEPPLP >Mature_354_residues MDEFDQRSWWTPVPDDAAWALPDDLRAADPLGGRDCGWVNQIRPFVRHFSRPGEQVFDPFCGFGSSLLAAALEGRNAHGM EIDPARAQLARARLQRHAVEAPVVVGSLAVNAPAGPIDLCLTNVPYFGCHWRGDVLPGQLYASSDYASYLTGMRAVFHAL RKQMRPDGVGVAMVQNVVVGGRVIPQAWDLGRILASLFTLREERVLCYRRPAAALAHAETQSNRSHEYALIFQHCRARLD LQQAAQLLQAVQAQGLPVVVHGSYARWLASPTLVPDGPADLDLMLHGEQALWDRLTLWLQQQGFALSLWGEPCRAPVALA VVRAHRYLRAERIGADGRRLQIDLQLPVDEPPLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39154; Mature: 39154
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEFDQRSWWTPVPDDAAWALPDDLRAADPLGGRDCGWVNQIRPFVRHFSRPGEQVFDPF CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH CGFGSSLLAAALEGRNAHGMEIDPARAQLARARLQRHAVEAPVVVGSLAVNAPAGPIDLC HCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHH LTNVPYFGCHWRGDVLPGQLYASSDYASYLTGMRAVFHALRKQMRPDGVGVAMVQNVVVG HHCCCCCCEEECCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC GRVIPQAWDLGRILASLFTLREERVLCYRRPAAALAHAETQSNRSHEYALIFQHCRARLD CEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCC LQQAAQLLQAVQAQGLPVVVHGSYARWLASPTLVPDGPADLDLMLHGEQALWDRLTLWLQ HHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHH QQGFALSLWGEPCRAPVALAVVRAHRYLRAERIGADGRRLQIDLQLPVDEPPLP CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure MDEFDQRSWWTPVPDDAAWALPDDLRAADPLGGRDCGWVNQIRPFVRHFSRPGEQVFDPF CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH CGFGSSLLAAALEGRNAHGMEIDPARAQLARARLQRHAVEAPVVVGSLAVNAPAGPIDLC HCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHH LTNVPYFGCHWRGDVLPGQLYASSDYASYLTGMRAVFHALRKQMRPDGVGVAMVQNVVVG HHCCCCCCEEECCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC GRVIPQAWDLGRILASLFTLREERVLCYRRPAAALAHAETQSNRSHEYALIFQHCRARLD CEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCC LQQAAQLLQAVQAQGLPVVVHGSYARWLASPTLVPDGPADLDLMLHGEQALWDRLTLWLQ HHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHH QQGFALSLWGEPCRAPVALAVVRAHRYLRAERIGADGRRLQIDLQLPVDEPPLP CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA