Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is pbeF
Identifier: 21241445
GI number: 21241445
Start: 799431
End: 800834
Strand: Direct
Name: pbeF
Synonym: XAC0674
Alternate gene names: NA
Gene position: 799431-800834 (Clockwise)
Preceding gene: 21241444
Following gene: 21241446
Centisome position: 15.45
GC content: 64.03
Gene sequence:
>1404_bases ATGCATTACCTCGATAACCTGCTGCTCAACACCGATAGCTACAAGGCCAGCCACTGGCTGCAATATCCGCCCGGCACCGA TGCGTCGTTTTTCTATGTCGAATCGCGCGGTGGGCTCTACGAGCAGACCGTGTTCTTCGGTCTGCAGTCGCTCCTGAAGG ACGCGATCAACCGGCCGGTGACGCACGCCGACATCGACGATGCGAAAGACTTGCTGGTTGCGCATGGCGAGCCGTTCAAC GAGGCAGGCTGGCGCGATATCGTCGACCGGCTTGGCGGTCAGTTGCCGATCCGCATCCGCGCGGTGCCCGAGGGCGCCGT GGTGCCAACGCACAACGTGCTGATGACCATCGAGTCCACCGACGCCAAGGCGTTCTGGGCGCCGTCGTATCTGGAAACCT TGTTGCTGCGCGTGTGGTACCCGGTGACGGTGGCCACGGTGAGCTGGCAGGTGAAGCAGATCGTGCGCGACTACCTGGAG CGCACCAGCGACGATCCGGAAGGACAGCTGCCTTTCAAACTGCACGATTTTGGCGCGCGTGGCGTGTCCAGTCTTGGCTC GGCCGCATTGGGCGGTGCCGCGCATCTGGTGAATTTTCTCGGTACCGACACCTTGTCGGCGTTGCTGCTGGCGCGTGCGC ATTACCACACGCCGGTGGCCGGGTATTCGATTCCCGCTGCCGAGCACAGCACCATCACCAGCTGGGGCCGCGAGCGCGAG GTGGATGCGTATCGCAACATGCTGCGGCAGTTCGCGCGCCCGGGTTCGATCGTGGCGGTGGTGTCGGACAGCTACGACAT CTACCGTGCCATTCGCGAACATTGGGGCACTACCTTGCGCGAGGAAGTGATCGCCTCCGGCGCGACGGTGGTGATTCGTC CGGATTCGGGCGACCCGGTGGACGTGGTCGAGCAGTGCCTGCTGTTGCTGGACGAAGCGTTCGGCCATCAGCTCAATGGC AAGGGCTACAAGGTGCTCAACCATGTGCGGGTGATCCAGGGCGATGGCATCAACCCCACCTCGCTGCGCGCGATCCTGGA ACGCATCACCGCCGCCGGCTATGCCGCCGATAACGTTGCCTTCGGCATGGGCGGTGCGTTGCTGCAGAAGGTGGACCGCG ACACGCAGAAGTTTGCGTTGAAGTGCTCGGCGGTGCGCGTGGACGGGCAGTGGGTCGACGTCTACAAGGACCCGATCACC GACCAGGGCAAGCAGAGCAAGCGCGGTCGCCTGACCTTGCTGCGCAATCGCCACGATGGCAGCTACCGCAGCGCGTTGCT CGATGAGGTCGACACCTACCCGGACAGCGAAGACGCGCTGGTCACGGTGTGGGAAAACGGCGTGTCGCAACAGGAGTGGA CGCTGGAGCAGGTGCGCGCGCGTGCCGACGCTGCTCGTCGCTGA
Upstream 100 bases:
>100_bases CCGCGATACCACCAGGGGCGCACATGCCGTGACCGCTTGAACCGTGACCTCCCGCCGGCGGACAGACCGCCGGTTCATTC GACGCGAAGGAGCTTCCGTC
Downstream 100 bases:
>100_bases CGCGCGGCGCGCAGGACTCGCCATGCACGCTTCCATCGACGACATCTCCTTGTTGCCTGCTTCAGCGCTGTTGGCGCGTC TGCGCGCCGCAGCACCCCAC
Product: nicotinate phosphoribosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 467; Mature: 467
Protein sequence:
>467_residues MHYLDNLLLNTDSYKASHWLQYPPGTDASFFYVESRGGLYEQTVFFGLQSLLKDAINRPVTHADIDDAKDLLVAHGEPFN EAGWRDIVDRLGGQLPIRIRAVPEGAVVPTHNVLMTIESTDAKAFWAPSYLETLLLRVWYPVTVATVSWQVKQIVRDYLE RTSDDPEGQLPFKLHDFGARGVSSLGSAALGGAAHLVNFLGTDTLSALLLARAHYHTPVAGYSIPAAEHSTITSWGRERE VDAYRNMLRQFARPGSIVAVVSDSYDIYRAIREHWGTTLREEVIASGATVVIRPDSGDPVDVVEQCLLLLDEAFGHQLNG KGYKVLNHVRVIQGDGINPTSLRAILERITAAGYAADNVAFGMGGALLQKVDRDTQKFALKCSAVRVDGQWVDVYKDPIT DQGKQSKRGRLTLLRNRHDGSYRSALLDEVDTYPDSEDALVTVWENGVSQQEWTLEQVRARADAARR
Sequences:
>Translated_467_residues MHYLDNLLLNTDSYKASHWLQYPPGTDASFFYVESRGGLYEQTVFFGLQSLLKDAINRPVTHADIDDAKDLLVAHGEPFN EAGWRDIVDRLGGQLPIRIRAVPEGAVVPTHNVLMTIESTDAKAFWAPSYLETLLLRVWYPVTVATVSWQVKQIVRDYLE RTSDDPEGQLPFKLHDFGARGVSSLGSAALGGAAHLVNFLGTDTLSALLLARAHYHTPVAGYSIPAAEHSTITSWGRERE VDAYRNMLRQFARPGSIVAVVSDSYDIYRAIREHWGTTLREEVIASGATVVIRPDSGDPVDVVEQCLLLLDEAFGHQLNG KGYKVLNHVRVIQGDGINPTSLRAILERITAAGYAADNVAFGMGGALLQKVDRDTQKFALKCSAVRVDGQWVDVYKDPIT DQGKQSKRGRLTLLRNRHDGSYRSALLDEVDTYPDSEDALVTVWENGVSQQEWTLEQVRARADAARR >Mature_467_residues MHYLDNLLLNTDSYKASHWLQYPPGTDASFFYVESRGGLYEQTVFFGLQSLLKDAINRPVTHADIDDAKDLLVAHGEPFN EAGWRDIVDRLGGQLPIRIRAVPEGAVVPTHNVLMTIESTDAKAFWAPSYLETLLLRVWYPVTVATVSWQVKQIVRDYLE RTSDDPEGQLPFKLHDFGARGVSSLGSAALGGAAHLVNFLGTDTLSALLLARAHYHTPVAGYSIPAAEHSTITSWGRERE VDAYRNMLRQFARPGSIVAVVSDSYDIYRAIREHWGTTLREEVIASGATVVIRPDSGDPVDVVEQCLLLLDEAFGHQLNG KGYKVLNHVRVIQGDGINPTSLRAILERITAAGYAADNVAFGMGGALLQKVDRDTQKFALKCSAVRVDGQWVDVYKDPIT DQGKQSKRGRLTLLRNRHDGSYRSALLDEVDTYPDSEDALVTVWENGVSQQEWTLEQVRARADAARR
Specific function: Unknown
COG id: COG1488
COG function: function code H; Nicotinic acid phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAPRTase family [H]
Homologues:
Organism=Homo sapiens, GI5031977, Length=475, Percent_Identity=44.2105263157895, Blast_Score=380, Evalue=1e-105,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015977 - InterPro: IPR016471 - InterPro: IPR002638 [H]
Pfam domain/function: PF04095 NAPRTase [H]
EC number: NA
Molecular weight: Translated: 51828; Mature: 51828
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHYLDNLLLNTDSYKASHWLQYPPGTDASFFYVESRGGLYEQTVFFGLQSLLKDAINRPV CCCHHHHHCCCCCCCCCCEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC THADIDDAKDLLVAHGEPFNEAGWRDIVDRLGGQLPIRIRAVPEGAVVPTHNVLMTIEST CCCCCCHHHHHHEECCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCEECCCCEEEEEECC DAKAFWAPSYLETLLLRVWYPVTVATVSWQVKQIVRDYLERTSDDPEGQLPFKLHDFGAR CCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCH GVSSLGSAALGGAAHLVNFLGTDTLSALLLARAHYHTPVAGYSIPAAEHSTITSWGRERE HHHHHCHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCC VDAYRNMLRQFARPGSIVAVVSDSYDIYRAIREHWGTTLREEVIASGATVVIRPDSGDPV HHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCCCCCH DVVEQCLLLLDEAFGHQLNGKGYKVLNHVRVIQGDGINPTSLRAILERITAAGYAADNVA HHHHHHHHHHHHHHCCCCCCCCHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCH FGMGGALLQKVDRDTQKFALKCSAVRVDGQWVDVYKDPITDQGKQSKRGRLTLLRNRHDG HCCCHHHHHHHCCHHHHHHEEEEEEEECCEEEEEECCCCCCCCCCCCCCCEEEEECCCCC SYRSALLDEVDTYPDSEDALVTVWENGVSQQEWTLEQVRARADAARR HHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHYLDNLLLNTDSYKASHWLQYPPGTDASFFYVESRGGLYEQTVFFGLQSLLKDAINRPV CCCHHHHHCCCCCCCCCCEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC THADIDDAKDLLVAHGEPFNEAGWRDIVDRLGGQLPIRIRAVPEGAVVPTHNVLMTIEST CCCCCCHHHHHHEECCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCEECCCCEEEEEECC DAKAFWAPSYLETLLLRVWYPVTVATVSWQVKQIVRDYLERTSDDPEGQLPFKLHDFGAR CCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCH GVSSLGSAALGGAAHLVNFLGTDTLSALLLARAHYHTPVAGYSIPAAEHSTITSWGRERE HHHHHCHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCC VDAYRNMLRQFARPGSIVAVVSDSYDIYRAIREHWGTTLREEVIASGATVVIRPDSGDPV HHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCCCCCH DVVEQCLLLLDEAFGHQLNGKGYKVLNHVRVIQGDGINPTSLRAILERITAAGYAADNVA HHHHHHHHHHHHHHCCCCCCCCHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCH FGMGGALLQKVDRDTQKFALKCSAVRVDGQWVDVYKDPITDQGKQSKRGRLTLLRNRHDG HCCCHHHHHHHCCHHHHHHEEEEEEEECCEEEEEECCCCCCCCCCCCCCCEEEEECCCCC SYRSALLDEVDTYPDSEDALVTVWENGVSQQEWTLEQVRARADAARR HHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8948633 [H]