Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21241146
Identifier: 21241146
GI number: 21241146
Start: 442350
End: 443192
Strand: Direct
Name: 21241146
Synonym: XAC0372
Alternate gene names: NA
Gene position: 442350-443192 (Clockwise)
Preceding gene: 21241145
Following gene: 21241148
Centisome position: 8.55
GC content: 70.34
Gene sequence:
>843_bases GTGTTGTCGCAGGTGCGCACCGACGATGGGCGGACGCTGGCGGTGTGGTCGCGGGTGCCCGTGCAGCCGCGTGGCACGAT CGTGCTGGTGCACGGCCGCACCTGGAGCGCATTGCCCAACTTCGATTTGCAGGTGCCTGGCGAGCCGCGTGATGCGCGCT CTGTCCTTGCGGCGCTCGCGCAAGCCGGGTTTGCCGCGTACGCGGTGGATCTGCGCGGCTACGGCGGCAGCCCACGCGAC CGCACGGGCTGGAATACGCCCGCCCGTGCAGTGGCCGATGTCCGCAACGTGCTGGCCTGGGTCGCGCAGACCCATCCCGG CCTGCCGCCGCCCGCACTGCTAGGCTATTCCAACGGCGCGCGGGTGGCATTGCTGCTCGCGCAGCAGCAACCGCAAGAGA TTTCCGCACTGGTGTTGTTCGGCTTCCCGGACGATGTGGATACACCACCCGCGTCAGCGGTTCCGGCGGATCGGCCCTTG CGCACACCCACCACGGCCGCAGCGGCCGGCGAGGATTTCATCACCGCCAACGCGGCACCGCCGGTCGTACGTGCGGCTTA CGTCGCCCAGGCGCTGGCAGCGGACCCGGTGCGTACCGACTGGCGCGCGATGGAGCAGTTCGCCTTCCACCCCGAGCAGG TCGCGACGTTGCCGGTGCTGCTGTTGCGCGGCGTCGACGACCCGATCGCCACCCAGGCAGACAACGCCCATCTCTACGCA CGTCTGCGCAGCGAAGATCGCAGCTGGGTGACCCTGCCGCACGCCGACCACGTGGCCCAGGTCGAAGACAGCCACGCGGC CTGGGTGGACGCGGTGGTGAGCTTTCTGCGCCGGCCGCGCTAG
Upstream 100 bases:
>100_bases CGTCCGGAGACACCGCATGCCGCGTCGATTTGCCTGCCTGCTGTTACTGTTATTGGCTGCTGCGGCGCTGCACGCACAAC CGCAGCCTGGCCCCGGCACC
Downstream 100 bases:
>100_bases TCCAGCGCCTGCACGCATCCCACGCCACGGACGATGGATCACGCGGCTTTCGTCGCCGTTCTGAGCCGGCATGCGCGCAA CAACGGGTGGCAATCACTCC
Product: hydrolase
Products: NA
Alternate protein names: Secreted Protein
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MLSQVRTDDGRTLAVWSRVPVQPRGTIVLVHGRTWSALPNFDLQVPGEPRDARSVLAALAQAGFAAYAVDLRGYGGSPRD RTGWNTPARAVADVRNVLAWVAQTHPGLPPPALLGYSNGARVALLLAQQQPQEISALVLFGFPDDVDTPPASAVPADRPL RTPTTAAAAGEDFITANAAPPVVRAAYVAQALAADPVRTDWRAMEQFAFHPEQVATLPVLLLRGVDDPIATQADNAHLYA RLRSEDRSWVTLPHADHVAQVEDSHAAWVDAVVSFLRRPR
Sequences:
>Translated_280_residues MLSQVRTDDGRTLAVWSRVPVQPRGTIVLVHGRTWSALPNFDLQVPGEPRDARSVLAALAQAGFAAYAVDLRGYGGSPRD RTGWNTPARAVADVRNVLAWVAQTHPGLPPPALLGYSNGARVALLLAQQQPQEISALVLFGFPDDVDTPPASAVPADRPL RTPTTAAAAGEDFITANAAPPVVRAAYVAQALAADPVRTDWRAMEQFAFHPEQVATLPVLLLRGVDDPIATQADNAHLYA RLRSEDRSWVTLPHADHVAQVEDSHAAWVDAVVSFLRRPR >Mature_280_residues MLSQVRTDDGRTLAVWSRVPVQPRGTIVLVHGRTWSALPNFDLQVPGEPRDARSVLAALAQAGFAAYAVDLRGYGGSPRD RTGWNTPARAVADVRNVLAWVAQTHPGLPPPALLGYSNGARVALLLAQQQPQEISALVLFGFPDDVDTPPASAVPADRPL RTPTTAAAAGEDFITANAAPPVVRAAYVAQALAADPVRTDWRAMEQFAFHPEQVATLPVLLLRGVDDPIATQADNAHLYA RLRSEDRSWVTLPHADHVAQVEDSHAAWVDAVVSFLRRPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30178; Mature: 30178
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSQVRTDDGRTLAVWSRVPVQPRGTIVLVHGRTWSALPNFDLQVPGEPRDARSVLAALA CCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCEECCCCCHHHHHHHHHHH QAGFAAYAVDLRGYGGSPRDRTGWNTPARAVADVRNVLAWVAQTHPGLPPPALLGYSNGA HCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHEECCCCC RVALLLAQQQPQEISALVLFGFPDDVDTPPASAVPADRPLRTPTTAAAAGEDFITANAAP EEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEECCCCC PVVRAAYVAQALAADPVRTDWRAMEQFAFHPEQVATLPVLLLRGVDDPIATQADNAHLYA HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE RLRSEDRSWVTLPHADHVAQVEDSHAAWVDAVVSFLRRPR EEECCCCCEEECCCCCCHHHHCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MLSQVRTDDGRTLAVWSRVPVQPRGTIVLVHGRTWSALPNFDLQVPGEPRDARSVLAALA CCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCEECCCCCHHHHHHHHHHH QAGFAAYAVDLRGYGGSPRDRTGWNTPARAVADVRNVLAWVAQTHPGLPPPALLGYSNGA HCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHEECCCCC RVALLLAQQQPQEISALVLFGFPDDVDTPPASAVPADRPLRTPTTAAAAGEDFITANAAP EEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEECCCCC PVVRAAYVAQALAADPVRTDWRAMEQFAFHPEQVATLPVLLLRGVDDPIATQADNAHLYA HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE RLRSEDRSWVTLPHADHVAQVEDSHAAWVDAVVSFLRRPR EEECCCCCEEECCCCCCHHHHCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA