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The map label for this gene is avrXacE1

Identifier: 21241060

GI number: 21241060

Start: 339534

End: 340739

Strand: Reverse

Name: avrXacE1

Synonym: XAC0286

Alternate gene names: NA

Gene position: 340739-339534 (Counterclockwise)

Preceding gene: 21241061

Following gene: 21241058

Centisome position: 6.58

GC content: 63.93

Gene sequence:

>1206_bases
ATGGGACTATGCGTTTCAAGGCCGGCGACGTCAGGGTCGAGCGTGGCAGCGTCACCTGAGCAACATCCAAACCCTGCCTC
AGAGCAGGTTACCCCCCACACGCCTTCCGTTCCCGAGACGTCGGTGCCGCCTAGCCTGCAGGGCTTGCCGACACGCTGCG
TTCCCCGTGCGAGGCGGGGGCGTTCTGGGAAACCGACCCTGCAGCCGCACGAAGTCCAGCAGGCCGCCTACCAACTCGGA
ATGCGTCTCAGCGGCAGACCCATCGAAGACGTTCGCGACCGTCAACGCCTGGCCGACGCCACGGCGACGGTGCACGAGAC
ACGGCTGGCCTTGCACCATGGACGAGGCAATATCGAGAGCGATTTTCGGCTCAGCGATGGGCGCAGCTCCACCTGTAGTT
ACCTGTCTTACAGTTTCCTGTCTTACTGGCCCGGGAAACATGACATCGATTTGATGGCAGGTTGCGCGCTGGCTGTCAGC
GCAGGCAATTGCGACCAAAACGCAGCGGTCAACACACGCCGGCATGCGGTCCGCATGGAGGGCGGCGGGCAGATAACGAA
CGTCTGTGACGAAGCGTGCGCCCATATGTATGCGCTGTACCAGCCCCCAGGCTCGGCAGAGGCGGATGACTCGGCCGTCG
TTCTCGACTCGTGGTCCGATGGTCCGGCGGTTCTACTCAGGGATTCGCGCTGGGCCGGAACATACCGCCGCACATCCACG
TATCCGATTGAGCGCTTCGACAAGCCGGGTGCGATCGATGCGCTGGCCAGGACCCGCGCATTGCAAGCCGAAATCGAGGA
TCCGCAAACCGAGTTCCATGCACATCTGCGCGGCGTGGAGAGCGTCGTTCGCACCCCGCCCGTACCTGGCAAGATCTATG
CCTCGACGCCGGTCATCGCTCCCGACCTGGTCCAACGTACGCGTCAAAGGCTGCAAGAGTTATCGCCGCGGACGCGTAAG
GCGCTGGCTGCCGATGCGGCGCGGCAAGCCTACGGCCTGGATGACGCACAGCCCATCTCGCCGCGCACGACGACAGCGAT
CCTGAAAGACGCAGCGCGCCTGGATGCCCTGGGTCGCCCGCCTTTGAGCTGGGCGCCAACTTCTCACACACGGCTGAAGC
GTTTTGTCACCAGTGCCCGGACCAATGCAAGGCAGGCTTTCTGGTATCGAAGCGGGTGGCGCCCGCCTGTCACGGTGGCG
AGATGA

Upstream 100 bases:

>100_bases
GCGCCAGTCATTCGTGATCCCACACATGACTTCGGTGAACCAACAACGTTCGCAGCGCTGCTTGCCAAACTTGACGCCAG
GGTCATGATCGGAGAGCGAC

Downstream 100 bases:

>100_bases
ACTCTTCGATCAGGCGAACAGCTGCCTATCGTTCAGCGGCACGCTGTCATCGGCCTGATGGGCTGATGGCGGCCCGCCGA
ACACCTTTGCTGCGCGATAC

Product: avirulence protein

Products: NA

Alternate protein names: Hypothethical Protein; Type III Effector AvrPphE Family; AVRPPHE Avirulence Protein

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MGLCVSRPATSGSSVAASPEQHPNPASEQVTPHTPSVPETSVPPSLQGLPTRCVPRARRGRSGKPTLQPHEVQQAAYQLG
MRLSGRPIEDVRDRQRLADATATVHETRLALHHGRGNIESDFRLSDGRSSTCSYLSYSFLSYWPGKHDIDLMAGCALAVS
AGNCDQNAAVNTRRHAVRMEGGGQITNVCDEACAHMYALYQPPGSAEADDSAVVLDSWSDGPAVLLRDSRWAGTYRRTST
YPIERFDKPGAIDALARTRALQAEIEDPQTEFHAHLRGVESVVRTPPVPGKIYASTPVIAPDLVQRTRQRLQELSPRTRK
ALAADAARQAYGLDDAQPISPRTTTAILKDAARLDALGRPPLSWAPTSHTRLKRFVTSARTNARQAFWYRSGWRPPVTVA
R

Sequences:

>Translated_401_residues
MGLCVSRPATSGSSVAASPEQHPNPASEQVTPHTPSVPETSVPPSLQGLPTRCVPRARRGRSGKPTLQPHEVQQAAYQLG
MRLSGRPIEDVRDRQRLADATATVHETRLALHHGRGNIESDFRLSDGRSSTCSYLSYSFLSYWPGKHDIDLMAGCALAVS
AGNCDQNAAVNTRRHAVRMEGGGQITNVCDEACAHMYALYQPPGSAEADDSAVVLDSWSDGPAVLLRDSRWAGTYRRTST
YPIERFDKPGAIDALARTRALQAEIEDPQTEFHAHLRGVESVVRTPPVPGKIYASTPVIAPDLVQRTRQRLQELSPRTRK
ALAADAARQAYGLDDAQPISPRTTTAILKDAARLDALGRPPLSWAPTSHTRLKRFVTSARTNARQAFWYRSGWRPPVTVA
R
>Mature_400_residues
GLCVSRPATSGSSVAASPEQHPNPASEQVTPHTPSVPETSVPPSLQGLPTRCVPRARRGRSGKPTLQPHEVQQAAYQLGM
RLSGRPIEDVRDRQRLADATATVHETRLALHHGRGNIESDFRLSDGRSSTCSYLSYSFLSYWPGKHDIDLMAGCALAVSA
GNCDQNAAVNTRRHAVRMEGGGQITNVCDEACAHMYALYQPPGSAEADDSAVVLDSWSDGPAVLLRDSRWAGTYRRTSTY
PIERFDKPGAIDALARTRALQAEIEDPQTEFHAHLRGVESVVRTPPVPGKIYASTPVIAPDLVQRTRQRLQELSPRTRKA
LAADAARQAYGLDDAQPISPRTTTAILKDAARLDALGRPPLSWAPTSHTRLKRFVTSARTNARQAFWYRSGWRPPVTVAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43803; Mature: 43671

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLCVSRPATSGSSVAASPEQHPNPASEQVTPHTPSVPETSVPPSLQGLPTRCVPRARRG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHCC
RSGKPTLQPHEVQQAAYQLGMRLSGRPIEDVRDRQRLADATATVHETRLALHHGRGNIES
CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DFRLSDGRSSTCSYLSYSFLSYWPGKHDIDLMAGCALAVSAGNCDQNAAVNTRRHAVRME
CCEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCCCCCCCCCHHHEEEEC
GGGQITNVCDEACAHMYALYQPPGSAEADDSAVVLDSWSDGPAVLLRDSRWAGTYRRTST
CCCCHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCC
YPIERFDKPGAIDALARTRALQAEIEDPQTEFHAHLRGVESVVRTPPVPGKIYASTPVIA
CCHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC
PDLVQRTRQRLQELSPRTRKALAADAARQAYGLDDAQPISPRTTTAILKDAARLDALGRP
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
PLSWAPTSHTRLKRFVTSARTNARQAFWYRSGWRPPVTVAR
CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
GLCVSRPATSGSSVAASPEQHPNPASEQVTPHTPSVPETSVPPSLQGLPTRCVPRARRG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHCC
RSGKPTLQPHEVQQAAYQLGMRLSGRPIEDVRDRQRLADATATVHETRLALHHGRGNIES
CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DFRLSDGRSSTCSYLSYSFLSYWPGKHDIDLMAGCALAVSAGNCDQNAAVNTRRHAVRME
CCEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCCCCCCCCCHHHEEEEC
GGGQITNVCDEACAHMYALYQPPGSAEADDSAVVLDSWSDGPAVLLRDSRWAGTYRRTST
CCCCHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCC
YPIERFDKPGAIDALARTRALQAEIEDPQTEFHAHLRGVESVVRTPPVPGKIYASTPVIA
CCHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC
PDLVQRTRQRLQELSPRTRKALAADAARQAYGLDDAQPISPRTTTAILKDAARLDALGRP
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
PLSWAPTSHTRLKRFVTSARTNARQAFWYRSGWRPPVTVAR
CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA