Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21241052
Identifier: 21241052
GI number: 21241052
Start: 332399
End: 333280
Strand: Reverse
Name: 21241052
Synonym: XAC0278
Alternate gene names: NA
Gene position: 333280-332399 (Counterclockwise)
Preceding gene: 21241058
Following gene: 21241051
Centisome position: 6.44
GC content: 63.95
Gene sequence:
>882_bases TTGCCCATGCATTTTCTGCTGTTTGCCGTTGTCTGCAGTGTCCTGGTGTCGGTGCTGTTGAAGCTTGCGCCACGCCACCG GATCGACGTGTTTCAGGCCATTACCTGGAACTACGCCACTGCCGCACTCCTGGCCTGGCTGATCCTGCATCCTGCGCTGG ACACGCTGCGCTCCACGACCGCTCCCTGGGTGGCGTTGCTGCTGCTGGCCGTGGCGCTGCCCTCCATCTTCCTGGTGCTG GCGCGGTCGGTCGCGGTGGCCGGCATCGTACGTACCGATGTTGCGCAACGTTTGTCGTTGGTGCTTTCGTTGGCTGCAGC CTTCACCGTTTTCGGCGAACCGGTCAATGGCTGGAAACTGGCAGGGCTGGCGCTGGGCATGGTGGCCATCGCGTGCATCG TGCGACGCCCCCGTCAGCACGTGGCGACCGATCCGCTGCCGAGCACAACCGGCCTGCCCTGGCTGGTTGGCGTCTGGATG GGCTTTGCGCTCATCGACCTGTTGCTCAAGCACATCGCGCAGGCCGGTACACCATCGCTGACCTCGTTGACCTTGTGTTT TGCACTGGCCTTTTTGCTGATGCTTGGCGTGCAGAGCGTGCGTTGGGCGCGTGGTGCACGCCCGAGCACCCGCAGCATGC TTGCCGGCGTGCTGTTGGGTGCGCTCAATTTCGGCAACATCCTCTGTTACGTACGTGCCCACCAGGTGCTGCCGCACAGC CCGGCGACCGTTTTTGCCAGCATGAATCTGGGCGTCGTCGTGTTGGGTGCACTGGTCGGCAAGTTGGGATTTGCCGAACG CCTGGGCCTGCGCGGCTGGTTGGGGCTGGCACTGGCCGCACCGGCCATCGCGGCAATCGCCTGGGGAATACGTCTGGGTT GA
Upstream 100 bases:
>100_bases TCAACGCAGCCGATTCGGTGGGGAATGAGGGATTGGACATGCCTGCATAATAGCCGCCCCGCCGGCCGCGTTCATCGCCC TGCCTGCACACTTCGTTGCG
Downstream 100 bases:
>100_bases GGATCACGCGTTCGGCCTACGCGACGCCGGTTCGCCATCGTCCTTCCGCGCCGGTTGGCGGTCGCTAGCATGATCGTGCA TTCCCGCGGGAGTTTGTGAT
Product: integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MPMHFLLFAVVCSVLVSVLLKLAPRHRIDVFQAITWNYATAALLAWLILHPALDTLRSTTAPWVALLLLAVALPSIFLVL ARSVAVAGIVRTDVAQRLSLVLSLAAAFTVFGEPVNGWKLAGLALGMVAIACIVRRPRQHVATDPLPSTTGLPWLVGVWM GFALIDLLLKHIAQAGTPSLTSLTLCFALAFLLMLGVQSVRWARGARPSTRSMLAGVLLGALNFGNILCYVRAHQVLPHS PATVFASMNLGVVVLGALVGKLGFAERLGLRGWLGLALAAPAIAAIAWGIRLG
Sequences:
>Translated_293_residues MPMHFLLFAVVCSVLVSVLLKLAPRHRIDVFQAITWNYATAALLAWLILHPALDTLRSTTAPWVALLLLAVALPSIFLVL ARSVAVAGIVRTDVAQRLSLVLSLAAAFTVFGEPVNGWKLAGLALGMVAIACIVRRPRQHVATDPLPSTTGLPWLVGVWM GFALIDLLLKHIAQAGTPSLTSLTLCFALAFLLMLGVQSVRWARGARPSTRSMLAGVLLGALNFGNILCYVRAHQVLPHS PATVFASMNLGVVVLGALVGKLGFAERLGLRGWLGLALAAPAIAAIAWGIRLG >Mature_292_residues PMHFLLFAVVCSVLVSVLLKLAPRHRIDVFQAITWNYATAALLAWLILHPALDTLRSTTAPWVALLLLAVALPSIFLVLA RSVAVAGIVRTDVAQRLSLVLSLAAAFTVFGEPVNGWKLAGLALGMVAIACIVRRPRQHVATDPLPSTTGLPWLVGVWMG FALIDLLLKHIAQAGTPSLTSLTLCFALAFLLMLGVQSVRWARGARPSTRSMLAGVLLGALNFGNILCYVRAHQVLPHSP ATVFASMNLGVVVLGALVGKLGFAERLGLRGWLGLALAAPAIAAIAWGIRLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DUF6 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31090; Mature: 30959
Theoretical pI: Translated: 11.89; Mature: 11.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMHFLLFAVVCSVLVSVLLKLAPRHRIDVFQAITWNYATAALLAWLILHPALDTLRSTT CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC APWVALLLLAVALPSIFLVLARSVAVAGIVRTDVAQRLSLVLSLAAAFTVFGEPVNGWKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH AGLALGMVAIACIVRRPRQHVATDPLPSTTGLPWLVGVWMGFALIDLLLKHIAQAGTPSL HHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH TSLTLCFALAFLLMLGVQSVRWARGARPSTRSMLAGVLLGALNFGNILCYVRAHQVLPHS HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PATVFASMNLGVVVLGALVGKLGFAERLGLRGWLGLALAAPAIAAIAWGIRLG CHHHHEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PMHFLLFAVVCSVLVSVLLKLAPRHRIDVFQAITWNYATAALLAWLILHPALDTLRSTT CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC APWVALLLLAVALPSIFLVLARSVAVAGIVRTDVAQRLSLVLSLAAAFTVFGEPVNGWKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH AGLALGMVAIACIVRRPRQHVATDPLPSTTGLPWLVGVWMGFALIDLLLKHIAQAGTPSL HHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH TSLTLCFALAFLLMLGVQSVRWARGARPSTRSMLAGVLLGALNFGNILCYVRAHQVLPHS HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PATVFASMNLGVVVLGALVGKLGFAERLGLRGWLGLALAAPAIAAIAWGIRLG CHHHHEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]