Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is ansA [H]
Identifier: 21241022
GI number: 21241022
Start: 295087
End: 296022
Strand: Direct
Name: ansA [H]
Synonym: XAC0248
Alternate gene names: 21241022
Gene position: 295087-296022 (Clockwise)
Preceding gene: 21241021
Following gene: 21241023
Centisome position: 5.7
GC content: 66.99
Gene sequence:
>936_bases ATGCTGGTCATCCATGGTGGCGCGGGCGTGGAGAAATCCAGCCTTTCTAAGGACGAGCAGGCGCAGGCGCGCGAGGCGAT GCAACGCGCACTGCGTGCCGGGCACGCGGTGCTGCAACGTGGCGGCAGTGCAGTGGATGCAGTGGCCGCCACCATCACCG TGCTGGAGGATGCGCCGCAGTTCAACGCTGGCCGCGGTGCGGTGTTTACCCATGACGGCAGGAACGAACTGGACGCGGCC ATCATGGATGGCGCCAGCGGCAAGGCCGGTGCGATTACCGGCGTGCACACGGTCAAGAACCCGATCCTGCTGGCACGCAG CGTGATGGACCGCTCCAAGCACGTGATGCTGGTCGGCGACGGCGCTGAAGCGTTCGCGCGCGAGCAGGGCATCACCCTGG TAGACCCGGCCTATTTCCGCACCGACAAGCGCTGGCAGCAACTGCAGAAAGCGCTCAAGGCCGAGGCCGGCGACCGCCAG GCGCAGGCCGAGCTGGATCTGGAGACCGCCAAGCATTTCGGCACCGTCGGCGCGCTGGCGCTGGACCGCGACGGCCATCT GGCTGCCGGTACCTCCACCGGCGGCATGACCAACAAGCGCTATGGCCGGGTCGGCGATGCACCCATCATCGGGGCCGGCA CCTATGCCAACAGCCAATGCGCGGTGTCCGGCACCGGCTGGGGCGAGTTCTACATCCGCGCCGTGGCTGCCTACGACATC TGTGCGCGCATGAAATACGCCGGGCAATCGCTGCAGCAGGCCGCCGAGACCGTGATCGACCAGCAGATCCCGAAGGCCGG CGGGGACGGCGGCGCCATCGCGCTGGATGCACAGGGCAACCTGGCGTTTCCATTCAATACCGAGGGCATGTACCGCGGCT GGATCGGCGCCGACGGCACCGCGCATGTGGCGATTTTCAAGGACGAGACGTTGTAA
Upstream 100 bases:
>100_bases CACTCCATCGAGGAACTTCATGATCGCTAAGTCCGCACGCGCGTTATGCCTGTCGCTCTTTCTGCTGCTCATCGCCGGCC CGGCGCTTGCAGCCACGCCG
Downstream 100 bases:
>100_bases CGCCGCCATCCCCAACCGCGGCCTTCCACCCAATCCAACGGCACATGCCAGCGGTCGCGAAACCCGCTAGCGTGCCCGGC TGCACTACCCACTCAGGAAT
Product: asparaginase
Products: NA
Alternate protein names: Beta-aspartyl-peptidase; EcAIII; Isoaspartyl dipeptidase [H]
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MLVIHGGAGVEKSSLSKDEQAQAREAMQRALRAGHAVLQRGGSAVDAVAATITVLEDAPQFNAGRGAVFTHDGRNELDAA IMDGASGKAGAITGVHTVKNPILLARSVMDRSKHVMLVGDGAEAFAREQGITLVDPAYFRTDKRWQQLQKALKAEAGDRQ AQAELDLETAKHFGTVGALALDRDGHLAAGTSTGGMTNKRYGRVGDAPIIGAGTYANSQCAVSGTGWGEFYIRAVAAYDI CARMKYAGQSLQQAAETVIDQQIPKAGGDGGAIALDAQGNLAFPFNTEGMYRGWIGADGTAHVAIFKDETL
Sequences:
>Translated_311_residues MLVIHGGAGVEKSSLSKDEQAQAREAMQRALRAGHAVLQRGGSAVDAVAATITVLEDAPQFNAGRGAVFTHDGRNELDAA IMDGASGKAGAITGVHTVKNPILLARSVMDRSKHVMLVGDGAEAFAREQGITLVDPAYFRTDKRWQQLQKALKAEAGDRQ AQAELDLETAKHFGTVGALALDRDGHLAAGTSTGGMTNKRYGRVGDAPIIGAGTYANSQCAVSGTGWGEFYIRAVAAYDI CARMKYAGQSLQQAAETVIDQQIPKAGGDGGAIALDAQGNLAFPFNTEGMYRGWIGADGTAHVAIFKDETL >Mature_311_residues MLVIHGGAGVEKSSLSKDEQAQAREAMQRALRAGHAVLQRGGSAVDAVAATITVLEDAPQFNAGRGAVFTHDGRNELDAA IMDGASGKAGAITGVHTVKNPILLARSVMDRSKHVMLVGDGAEAFAREQGITLVDPAYFRTDKRWQQLQKALKAEAGDRQ AQAELDLETAKHFGTVGALALDRDGHLAAGTSTGGMTNKRYGRVGDAPIIGAGTYANSQCAVSGTGWGEFYIRAVAAYDI CARMKYAGQSLQQAAETVIDQQIPKAGGDGGAIALDAQGNLAFPFNTEGMYRGWIGADGTAHVAIFKDETL
Specific function: May be involved in glutathione, and possibly other peptide, transport, although these results could also be due to polar effects of disruption [H]
COG id: COG1446
COG function: function code E; Asparaginase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ntn-hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI145275202, Length=312, Percent_Identity=37.5, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI145275200, Length=312, Percent_Identity=37.5, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI98991769, Length=359, Percent_Identity=29.8050139275766, Blast_Score=117, Evalue=9e-27, Organism=Escherichia coli, GI1787050, Length=311, Percent_Identity=49.1961414790997, Blast_Score=291, Evalue=3e-80, Organism=Drosophila melanogaster, GI18921183, Length=319, Percent_Identity=36.0501567398119, Blast_Score=156, Evalue=2e-38, Organism=Drosophila melanogaster, GI21357893, Length=268, Percent_Identity=35.0746268656716, Blast_Score=126, Evalue=2e-29, Organism=Drosophila melanogaster, GI221330102, Length=272, Percent_Identity=32.3529411764706, Blast_Score=102, Evalue=4e-22, Organism=Drosophila melanogaster, GI24652135, Length=272, Percent_Identity=32.3529411764706, Blast_Score=101, Evalue=5e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000246 [H]
Pfam domain/function: PF01112 Asparaginase_2 [H]
EC number: =3.4.19.5 [H]
Molecular weight: Translated: 32571; Mature: 32571
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVIHGGAGVEKSSLSKDEQAQAREAMQRALRAGHAVLQRGGSAVDAVAATITVLEDAPQ CEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC FNAGRGAVFTHDGRNELDAAIMDGASGKAGAITGVHTVKNPILLARSVMDRSKHVMLVGD CCCCCCCEEECCCCCHHHHHHHCCCCCCCCCEECHHHHCCHHHHHHHHHCCCCEEEEEEC GAEAFAREQGITLVDPAYFRTDKRWQQLQKALKAEAGDRQAQAELDLETAKHFGTVGALA CHHHHHHHCCCEEECHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEE LDRDGHLAAGTSTGGMTNKRYGRVGDAPIIGAGTYANSQCAVSGTGWGEFYIRAVAAYDI ECCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCHHHHHHHHHHHHHH CARMKYAGQSLQQAAETVIDQQIPKAGGDGGAIALDAQGNLAFPFNTEGMYRGWIGADGT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCCEEEEECCCCC AHVAIFKDETL EEEEEEECCCC >Mature Secondary Structure MLVIHGGAGVEKSSLSKDEQAQAREAMQRALRAGHAVLQRGGSAVDAVAATITVLEDAPQ CEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC FNAGRGAVFTHDGRNELDAAIMDGASGKAGAITGVHTVKNPILLARSVMDRSKHVMLVGD CCCCCCCEEECCCCCHHHHHHHCCCCCCCCCEECHHHHCCHHHHHHHHHCCCCEEEEEEC GAEAFAREQGITLVDPAYFRTDKRWQQLQKALKAEAGDRQAQAELDLETAKHFGTVGALA CHHHHHHHCCCEEECHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEE LDRDGHLAAGTSTGGMTNKRYGRVGDAPIIGAGTYANSQCAVSGTGWGEFYIRAVAAYDI ECCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCHHHHHHHHHHHHHH CARMKYAGQSLQQAAETVIDQQIPKAGGDGGAIALDAQGNLAFPFNTEGMYRGWIGADGT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCCEEEEECCCCC AHVAIFKDETL EEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 3045084; 7984428 [H]