Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is yiiD [C]
Identifier: 21240992
GI number: 21240992
Start: 266514
End: 267158
Strand: Direct
Name: yiiD [C]
Synonym: XAC0218
Alternate gene names: 21240992
Gene position: 266514-267158 (Clockwise)
Preceding gene: 21240991
Following gene: 21240993
Centisome position: 5.15
GC content: 65.74
Gene sequence:
>645_bases TTGCACCAAGGTGTCGATACGTTTGTTGCACGCAACCAGAGCGATGCCGGCCTGCACATCGCACGTGGCGATGACTGCAT TCACCATGCGGTGCCGCATGTCATGCAGGTGCACAAGACGCTCGCAGAACATTGCGGCATGATGCCGCCCTTCGCCGTCT TCCAGTCTTTGCCGATGACTCCTTCGTGCACGCTCGCATCCGCCCTGCAGTCGCTGCAGCAGCAGTTCATCGCCATGCCG CTGGTCCTGTCGATGGGCATCGCTGTCGACGGCTTGCACGATGGTGCGTTGCGCCTGCGGGCGCCGCTGCAGGCCAACGT CAACGACAAGGCCAATGCATTCGGCGGCAGCCTGGCCTCGCTGATGACGCTGGCCAGCTGGGGGTGGCTGACCCTGCAGC TGCAATTGGCCGGGCACCACGCCGATGTCTACGTCGCCGACAGCCAGCTGCGCTATGTCGCGCCGGTGTACGAAGACCTG GTCGCCAATGCCGAGCCGTCCGAGCTGGGGAGCTGGGAGGCCTTTCTGGCGACGTTCCGGCAGCGCGGCAAGGCGCGCAT CGGCATGCGCGCGCAGATCGCGCTGGGCTCCGGTGCCGCCGCGGCCACGTTGAGCGGGCGCTTCGTGGCGTTTCCAAAAC GGTAG
Upstream 100 bases:
>100_bases CGCGGTCGTTGGCTGGCGGTTTTATGCATGGCGCGCTATCTGCAACGCCACCGGCAGGCACGTGGCGGACATCGCTTGCT GACCGAGCGGGCGATCCGGG
Downstream 100 bases:
>100_bases GATGCCGGCTGGATCCGGGGGAATACGCATGCGTGCAGTCATTACAACGATCGTGCTGCTTGGGCTGGCACTGCTGAGCG GGGTGGCCAATGCCGGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Thioesterase Domain-Containing Protein; Thioesterase Domain Protein; Histone Acetyltransferase HPA2-Like Acetyltransferase
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MHQGVDTFVARNQSDAGLHIARGDDCIHHAVPHVMQVHKTLAEHCGMMPPFAVFQSLPMTPSCTLASALQSLQQQFIAMP LVLSMGIAVDGLHDGALRLRAPLQANVNDKANAFGGSLASLMTLASWGWLTLQLQLAGHHADVYVADSQLRYVAPVYEDL VANAEPSELGSWEAFLATFRQRGKARIGMRAQIALGSGAAAATLSGRFVAFPKR
Sequences:
>Translated_214_residues MHQGVDTFVARNQSDAGLHIARGDDCIHHAVPHVMQVHKTLAEHCGMMPPFAVFQSLPMTPSCTLASALQSLQQQFIAMP LVLSMGIAVDGLHDGALRLRAPLQANVNDKANAFGGSLASLMTLASWGWLTLQLQLAGHHADVYVADSQLRYVAPVYEDL VANAEPSELGSWEAFLATFRQRGKARIGMRAQIALGSGAAAATLSGRFVAFPKR >Mature_214_residues MHQGVDTFVARNQSDAGLHIARGDDCIHHAVPHVMQVHKTLAEHCGMMPPFAVFQSLPMTPSCTLASALQSLQQQFIAMP LVLSMGIAVDGLHDGALRLRAPLQANVNDKANAFGGSLASLMTLASWGWLTLQLQLAGHHADVYVADSQLRYVAPVYEDL VANAEPSELGSWEAFLATFRQRGKARIGMRAQIALGSGAAAATLSGRFVAFPKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22954; Mature: 22954
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHQGVDTFVARNQSDAGLHIARGDDCIHHAVPHVMQVHKTLAEHCGMMPPFAVFQSLPMT CCCCHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCC PSCTLASALQSLQQQFIAMPLVLSMGIAVDGLHDGALRLRAPLQANVNDKANAFGGSLAS CCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHH LMTLASWGWLTLQLQLAGHHADVYVADSQLRYVAPVYEDLVANAEPSELGSWEAFLATFR HHHHHCCCEEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHCCCCCHHCCHHHHHHHHHH QRGKARIGMRAQIALGSGAAAATLSGRFVAFPKR HCCCCCCCCEEEEEECCCCCEEEECCCEEECCCC >Mature Secondary Structure MHQGVDTFVARNQSDAGLHIARGDDCIHHAVPHVMQVHKTLAEHCGMMPPFAVFQSLPMT CCCCHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCC PSCTLASALQSLQQQFIAMPLVLSMGIAVDGLHDGALRLRAPLQANVNDKANAFGGSLAS CCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHH LMTLASWGWLTLQLQLAGHHADVYVADSQLRYVAPVYEDLVANAEPSELGSWEAFLATFR HHHHHCCCEEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHCCCCCHHCCHHHHHHHHHH QRGKARIGMRAQIALGSGAAAATLSGRFVAFPKR HCCCCCCCCEEEEEECCCCCEEEECCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA