Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226898

Identifier: 21226898

GI number: 21226898

Start: 950198

End: 950614

Strand: Reverse

Name: 21226898

Synonym: MM_0796

Alternate gene names: NA

Gene position: 950614-950198 (Counterclockwise)

Preceding gene: 21226900

Following gene: 21226897

Centisome position: 23.21

GC content: 36.69

Gene sequence:

>417_bases
ATGAATGCTGTTCAATTGATTGAAGCTAATACTTATAACGTGAGTGATCCTAAAAAAGAAAACGTTATAATGTATACTCG
TAAAGGTCCTAATGGTGTGCCAGCAGTTCTTACGATCGAGTTTCCGGACTGTAAAAAGATCTTTAAAGGCGAAGAAATTA
CTGAAAGCGAGGTGCAAGAACTAGATATGGTAACTGTAGATCTGTCTAAACATCAGCCTGGGGCTTCACTTGTTTGTTTA
TCCCTTCTAATACCGACAGTTTATCTGGAGAATCCGCAAAAAGCTGAGCCAGTAACAACGTTCTGTATTAAAACAACTAG
GAAACCTGGTTCAATAGGTCCTGAATATCATATTGGACAAGATGATTCGTATGAAATAACTGAATTGAATGGTGAAGCAA
CATTACTGTTAAAATAA

Upstream 100 bases:

>100_bases
TGCTTAGTCTGATAAATAGTGCCAACATAACCAAAAAAGAATACTGGAATTGAATAAAACAGAATTATAAGAAAAATATT
TTAGAGGAACCCAAATGACT

Downstream 100 bases:

>100_bases
CTTAGCTAAATGGTAAAGCAAAATCTAAGCGGAATTCATTGATCATCGGTTTAGGGAGAATCGTTCTCAACTGCATCAAT
TTCCACATTTAGGTTTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MNAVQLIEANTYNVSDPKKENVIMYTRKGPNGVPAVLTIEFPDCKKIFKGEEITESEVQELDMVTVDLSKHQPGASLVCL
SLLIPTVYLENPQKAEPVTTFCIKTTRKPGSIGPEYHIGQDDSYEITELNGEATLLLK

Sequences:

>Translated_138_residues
MNAVQLIEANTYNVSDPKKENVIMYTRKGPNGVPAVLTIEFPDCKKIFKGEEITESEVQELDMVTVDLSKHQPGASLVCL
SLLIPTVYLENPQKAEPVTTFCIKTTRKPGSIGPEYHIGQDDSYEITELNGEATLLLK
>Mature_138_residues
MNAVQLIEANTYNVSDPKKENVIMYTRKGPNGVPAVLTIEFPDCKKIFKGEEITESEVQELDMVTVDLSKHQPGASLVCL
SLLIPTVYLENPQKAEPVTTFCIKTTRKPGSIGPEYHIGQDDSYEITELNGEATLLLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15283; Mature: 15283

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVQLIEANTYNVSDPKKENVIMYTRKGPNGVPAVLTIEFPDCKKIFKGEEITESEVQE
CCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCHHHHHCCCCCCHHHHHH
LDMVTVDLSKHQPGASLVCLSLLIPTVYLENPQKAEPVTTFCIKTTRKPGSIGPEYHIGQ
EEEEEEECCCCCCCHHHHHHHHHHHHEEECCCCCCCCEEEEEEEECCCCCCCCCCEECCC
DDSYEITELNGEATLLLK
CCCEEEEEECCCEEEEEC
>Mature Secondary Structure
MNAVQLIEANTYNVSDPKKENVIMYTRKGPNGVPAVLTIEFPDCKKIFKGEEITESEVQE
CCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCHHHHHCCCCCCHHHHHH
LDMVTVDLSKHQPGASLVCLSLLIPTVYLENPQKAEPVTTFCIKTTRKPGSIGPEYHIGQ
EEEEEEECCCCCCCHHHHHHHHHHHHEEECCCCCCCCEEEEEEEECCCCCCCCCCEECCC
DDSYEITELNGEATLLLK
CCCEEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA