Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is yegU [C]
Identifier: 21226896
GI number: 21226896
Start: 947883
End: 948872
Strand: Reverse
Name: yegU [C]
Synonym: MM_0794
Alternate gene names: 21226896
Gene position: 948872-947883 (Counterclockwise)
Preceding gene: 21226897
Following gene: 21226895
Centisome position: 23.16
GC content: 46.87
Gene sequence:
>990_bases ATGAATTCAGGAAATATGCAAGATACTCTGGATCTCGAAAAAAAGCTCCGCGGCTACCTTTTCGGCACAGCCTGTGCTGA TGCTCTCGGCCGCCCCGTAGAACACCTGACCCTTAAGCAGATTAAAGAGAAGTATGGAGAAAAAGGAATCCTTGAGCTTC CTCCAAACTCTTCCTGGACAGATGATACTCAGTTAATGCTTGTGCTTGCCAGAGGACTTCTTCATGGAGCAGAATTTGAA CTTCCTGAGCTTATGAAACATATAGCGGGAGAGCTTGTCCTTTGGCTGAAAGAGCCTGACCTCGGGGCAGGAGCAACAAC AAAAGGTGCAGCTTTAAGTCTTAAGGACGGAATTCACTGGAGCGAATCCGGACTAAATTCAAAAACCTGCGGAAGCCTCA TGCGGGTTGGTATTCTTGGCTTCATCTTCAGTAATGATCCTGATAAATTGATTGAAGCTGCTTCCCTTTCCGGCAGAATA ACTCATAACCATCCGACAGCAGATGCTGCATCGGTTGCAGGTGCATATGCTGTGAAACTGGCTCTTGACGGGATAGCTCC CGAAGACATGTTTTTACCTCTTCTCAGGGTAACGGAAGGAATTTCGGATGAATTTACCGAAGCCCTCAAACATTCTTATG AACTTGCTCACAGTAACCTGAGCGACGAAGAAGCTCTTCAAAAACTCGGGCAGGGCTGGTATGCGGATGAGACTTTTGCA CTTGCTTATTTCTGCATCCTGCGGTATCCTGATAACTATAAAAAAGCAGTCCAGACCGGAGTGAACATAACAGGAGATTC GGATTCAGTGGGCAGTGTTGCAGGCGGGATTCTCGGGGCAAGGCTTGGGATTGAAGCAGTACCGGTTTCCTGGGTTGAAT CTCTGAAGGAAAAAGAGATAATTGAGGAAATGGTAGAGCCCCTGATTGAGAAGTATCTTGAAGTTTCCGAAAACAAACAT CAGGTCTCTGAAGACGGGTTTGGAGCCTGA
Upstream 100 bases:
>100_bases GAGACTTAAGAAGCAAATTTTGGGTTTTGGGATAAGCTCTATAAGTAAACTTAATCATACATAGATAGTTGCATTTCTCT TTTGAGACGGAATTGAAATA
Downstream 100 bases:
>100_bases AATTGAGGTTACCAAATGGATTTTTCCGAAAAAGGTGTTTACTGTCTGGTGTTTGAAAACCGGGGCTGTGTGGTAGAGGT CGGGAAAAAAGGAACTTTTT
Product: ADP-ribosylglycohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MNSGNMQDTLDLEKKLRGYLFGTACADALGRPVEHLTLKQIKEKYGEKGILELPPNSSWTDDTQLMLVLARGLLHGAEFE LPELMKHIAGELVLWLKEPDLGAGATTKGAALSLKDGIHWSESGLNSKTCGSLMRVGILGFIFSNDPDKLIEAASLSGRI THNHPTADAASVAGAYAVKLALDGIAPEDMFLPLLRVTEGISDEFTEALKHSYELAHSNLSDEEALQKLGQGWYADETFA LAYFCILRYPDNYKKAVQTGVNITGDSDSVGSVAGGILGARLGIEAVPVSWVESLKEKEIIEEMVEPLIEKYLEVSENKH QVSEDGFGA
Sequences:
>Translated_329_residues MNSGNMQDTLDLEKKLRGYLFGTACADALGRPVEHLTLKQIKEKYGEKGILELPPNSSWTDDTQLMLVLARGLLHGAEFE LPELMKHIAGELVLWLKEPDLGAGATTKGAALSLKDGIHWSESGLNSKTCGSLMRVGILGFIFSNDPDKLIEAASLSGRI THNHPTADAASVAGAYAVKLALDGIAPEDMFLPLLRVTEGISDEFTEALKHSYELAHSNLSDEEALQKLGQGWYADETFA LAYFCILRYPDNYKKAVQTGVNITGDSDSVGSVAGGILGARLGIEAVPVSWVESLKEKEIIEEMVEPLIEKYLEVSENKH QVSEDGFGA >Mature_329_residues MNSGNMQDTLDLEKKLRGYLFGTACADALGRPVEHLTLKQIKEKYGEKGILELPPNSSWTDDTQLMLVLARGLLHGAEFE LPELMKHIAGELVLWLKEPDLGAGATTKGAALSLKDGIHWSESGLNSKTCGSLMRVGILGFIFSNDPDKLIEAASLSGRI THNHPTADAASVAGAYAVKLALDGIAPEDMFLPLLRVTEGISDEFTEALKHSYELAHSNLSDEEALQKLGQGWYADETFA LAYFCILRYPDNYKKAVQTGVNITGDSDSVGSVAGGILGARLGIEAVPVSWVESLKEKEIIEEMVEPLIEKYLEVSENKH QVSEDGFGA
Specific function: Unknown
COG id: COG1397
COG function: function code O; ADP-ribosylglycohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ADP-ribosylglycohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI8923417, Length=292, Percent_Identity=26.3698630136986, Blast_Score=78, Evalue=1e-14, Organism=Escherichia coli, GI1788416, Length=301, Percent_Identity=25.5813953488372, Blast_Score=72, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005502 [H]
Pfam domain/function: PF03747 ADP_ribosyl_GH [H]
EC number: 3.2.-.-
Molecular weight: Translated: 35675; Mature: 35675
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSGNMQDTLDLEKKLRGYLFGTACADALGRPVEHLTLKQIKEKYGEKGILELPPNSSWT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEECCCCCCCC DDTQLMLVLARGLLHGAEFELPELMKHIAGELVLWLKEPDLGAGATTKGAALSLKDGIHW CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEEEECCCCCCCCCCCCCEEECCCCCCC SESGLNSKTCGSLMRVGILGFIFSNDPDKLIEAASLSGRITHNHPTADAASVAGAYAVKL CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHH ALDGIAPEDMFLPLLRVTEGISDEFTEALKHSYELAHSNLSDEEALQKLGQGWYADETFA HHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHH LAYFCILRYPDNYKKAVQTGVNITGDSDSVGSVAGGILGARLGIEAVPVSWVESLKEKEI HHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHH IEEMVEPLIEKYLEVSENKHQVSEDGFGA HHHHHHHHHHHHHHHCCCHHHCCCCCCCC >Mature Secondary Structure MNSGNMQDTLDLEKKLRGYLFGTACADALGRPVEHLTLKQIKEKYGEKGILELPPNSSWT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEECCCCCCCC DDTQLMLVLARGLLHGAEFELPELMKHIAGELVLWLKEPDLGAGATTKGAALSLKDGIHW CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEEEECCCCCCCCCCCCCEEECCCCCCC SESGLNSKTCGSLMRVGILGFIFSNDPDKLIEAASLSGRITHNHPTADAASVAGAYAVKL CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHH ALDGIAPEDMFLPLLRVTEGISDEFTEALKHSYELAHSNLSDEEALQKLGQGWYADETFA HHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHH LAYFCILRYPDNYKKAVQTGVNITGDSDSVGSVAGGILGARLGIEAVPVSWVESLKEKEI HHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHH IEEMVEPLIEKYLEVSENKHQVSEDGFGA HHHHHHHHHHHHHHHCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]