Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226876

Identifier: 21226876

GI number: 21226876

Start: 924359

End: 924766

Strand: Reverse

Name: 21226876

Synonym: MM_0774

Alternate gene names: NA

Gene position: 924766-924359 (Counterclockwise)

Preceding gene: 21226878

Following gene: 21226873

Centisome position: 22.58

GC content: 41.18

Gene sequence:

>408_bases
TTGAAAATAAGGGTTGTGAGTTCTAGAGAAGAAATATTTACATTGAATCCCAACGAAAGAATAGTTCACCTGGCATTCAG
GCCTTCAAACAAAGATATTTTCTCTTTGGTTGAGAACTGCCCGAAGATTGAGGTAATACAGCTTCCTAAATCTTACAGGC
GCACGGTGTCGAAGTCCATAGAGATGTTCCTTGAAATGCAGCGCATTCAGCTCATAGAAGGAGATGTCTGGGGACACAGA
AAAGACATAAACGAATATTATCGCATTCCTTCCTCTATAATTGAGGAGATAAGGGAATTGAAGGTTGAAGGCAAATCCAC
TGAGGCTATTGAAGAAAAAGTCTCAAGGGAGAGCAAACTTAACCCCGAAATGGTTGCTTACATCCTCAGAAAGGATGTCA
GTGCCTGA

Upstream 100 bases:

>100_bases
CTAGTTCTTTACAAATAAATCATGTAGTTATAGAAAAATATTTAATGAAGAATTTTTTATCTTCAGATGAAAAAAAATCA
ATAGATCGGGAGGACAAACT

Downstream 100 bases:

>100_bases
GCCTCAAAAGTTTATTTTAAGGCTCCCATTTCATTTTTCTTTTAATTTTTATTGCTTTGTAATTTTATTATTTTTTCATT
TTGTGTTACTTTTTAAGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MKIRVVSSREEIFTLNPNERIVHLAFRPSNKDIFSLVENCPKIEVIQLPKSYRRTVSKSIEMFLEMQRIQLIEGDVWGHR
KDINEYYRIPSSIIEEIRELKVEGKSTEAIEEKVSRESKLNPEMVAYILRKDVSA

Sequences:

>Translated_135_residues
MKIRVVSSREEIFTLNPNERIVHLAFRPSNKDIFSLVENCPKIEVIQLPKSYRRTVSKSIEMFLEMQRIQLIEGDVWGHR
KDINEYYRIPSSIIEEIRELKVEGKSTEAIEEKVSRESKLNPEMVAYILRKDVSA
>Mature_135_residues
MKIRVVSSREEIFTLNPNERIVHLAFRPSNKDIFSLVENCPKIEVIQLPKSYRRTVSKSIEMFLEMQRIQLIEGDVWGHR
KDINEYYRIPSSIIEEIRELKVEGKSTEAIEEKVSRESKLNPEMVAYILRKDVSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15879; Mature: 15879

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRVVSSREEIFTLNPNERIVHLAFRPSNKDIFSLVENCPKIEVIQLPKSYRRTVSKSI
CEEEEECCCCCEEEECCCCEEEEEEECCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHH
EMFLEMQRIQLIEGDVWGHRKDINEYYRIPSSIIEEIRELKVEGKSTEAIEEKVSRESKL
HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
NPEMVAYILRKDVSA
CHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIRVVSSREEIFTLNPNERIVHLAFRPSNKDIFSLVENCPKIEVIQLPKSYRRTVSKSI
CEEEEECCCCCEEEECCCCEEEEEEECCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHH
EMFLEMQRIQLIEGDVWGHRKDINEYYRIPSSIIEEIRELKVEGKSTEAIEEKVSRESKL
HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
NPEMVAYILRKDVSA
CHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA