Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226876
Identifier: 21226876
GI number: 21226876
Start: 924359
End: 924766
Strand: Reverse
Name: 21226876
Synonym: MM_0774
Alternate gene names: NA
Gene position: 924766-924359 (Counterclockwise)
Preceding gene: 21226878
Following gene: 21226873
Centisome position: 22.58
GC content: 41.18
Gene sequence:
>408_bases TTGAAAATAAGGGTTGTGAGTTCTAGAGAAGAAATATTTACATTGAATCCCAACGAAAGAATAGTTCACCTGGCATTCAG GCCTTCAAACAAAGATATTTTCTCTTTGGTTGAGAACTGCCCGAAGATTGAGGTAATACAGCTTCCTAAATCTTACAGGC GCACGGTGTCGAAGTCCATAGAGATGTTCCTTGAAATGCAGCGCATTCAGCTCATAGAAGGAGATGTCTGGGGACACAGA AAAGACATAAACGAATATTATCGCATTCCTTCCTCTATAATTGAGGAGATAAGGGAATTGAAGGTTGAAGGCAAATCCAC TGAGGCTATTGAAGAAAAAGTCTCAAGGGAGAGCAAACTTAACCCCGAAATGGTTGCTTACATCCTCAGAAAGGATGTCA GTGCCTGA
Upstream 100 bases:
>100_bases CTAGTTCTTTACAAATAAATCATGTAGTTATAGAAAAATATTTAATGAAGAATTTTTTATCTTCAGATGAAAAAAAATCA ATAGATCGGGAGGACAAACT
Downstream 100 bases:
>100_bases GCCTCAAAAGTTTATTTTAAGGCTCCCATTTCATTTTTCTTTTAATTTTTATTGCTTTGTAATTTTATTATTTTTTCATT TTGTGTTACTTTTTAAGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MKIRVVSSREEIFTLNPNERIVHLAFRPSNKDIFSLVENCPKIEVIQLPKSYRRTVSKSIEMFLEMQRIQLIEGDVWGHR KDINEYYRIPSSIIEEIRELKVEGKSTEAIEEKVSRESKLNPEMVAYILRKDVSA
Sequences:
>Translated_135_residues MKIRVVSSREEIFTLNPNERIVHLAFRPSNKDIFSLVENCPKIEVIQLPKSYRRTVSKSIEMFLEMQRIQLIEGDVWGHR KDINEYYRIPSSIIEEIRELKVEGKSTEAIEEKVSRESKLNPEMVAYILRKDVSA >Mature_135_residues MKIRVVSSREEIFTLNPNERIVHLAFRPSNKDIFSLVENCPKIEVIQLPKSYRRTVSKSIEMFLEMQRIQLIEGDVWGHR KDINEYYRIPSSIIEEIRELKVEGKSTEAIEEKVSRESKLNPEMVAYILRKDVSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15879; Mature: 15879
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIRVVSSREEIFTLNPNERIVHLAFRPSNKDIFSLVENCPKIEVIQLPKSYRRTVSKSI CEEEEECCCCCEEEECCCCEEEEEEECCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHH EMFLEMQRIQLIEGDVWGHRKDINEYYRIPSSIIEEIRELKVEGKSTEAIEEKVSRESKL HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC NPEMVAYILRKDVSA CHHHHHHHHHHHCCC >Mature Secondary Structure MKIRVVSSREEIFTLNPNERIVHLAFRPSNKDIFSLVENCPKIEVIQLPKSYRRTVSKSI CEEEEECCCCCEEEECCCCEEEEEEECCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHH EMFLEMQRIQLIEGDVWGHRKDINEYYRIPSSIIEEIRELKVEGKSTEAIEEKVSRESKL HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC NPEMVAYILRKDVSA CHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA