Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226850
Identifier: 21226850
GI number: 21226850
Start: 896885
End: 897586
Strand: Reverse
Name: 21226850
Synonym: MM_0748
Alternate gene names: NA
Gene position: 897586-896885 (Counterclockwise)
Preceding gene: 21226851
Following gene: 21226847
Centisome position: 21.91
GC content: 45.01
Gene sequence:
>702_bases ATGACGCCTGAAATACCTCCCAAAAACTTTACTCCCCACCTTCCTGAGGATTATGATGCCAGAATCTCCGGTGTTCTTCC TTATTATTCGTCTTTTCACCAGGAGACTATCAACCTTGTCAAATCACTGCCCTCAAGCCCGAAAATCTGGATGGATACCG GGTGTGGGACAGGTTCCCTGATAAATAAAGCGATTGAGGAATTTCTCGATACAAAATTCCTTTTACTCGACCCTTCTGAA AGCATGCTGGAGCAGGCTAAGGGGAAATTATCATTCTACCCGGATGGGAAGGTGGAGTTCCTGAAGGCTTCCTCCACCCA GGAATTTTCTCAGGAACTGGAAGAAAAGCCGGACGTTATCACTGCCATACAATGCCACCATTATCTCAGCCTGGAAGACC GTTCCCGAGCCACCAGAGTGTGTTATAATCTTCTGAAAGAGGGTGGAATTTACATTACATTCGAGAACATCAGGCCCCTT ACAGAAGAAGGAGTCGCCGTGGGAAAAAGGTACTGGGGCAAATTTCAATCCCTGCATGGACGGAAAGAAAAGGAAATACA AACACATCTTGAGCGTTTTGATACCGAATATTTCCCAATAACTGTCGAGGAACACCTGAAGCTGTTGAGAGATACAGGGT TCAGGACTGTGGAACTATTCTGGTACTCTTATATGCAGGCTGGATTTTATTGCATTAAATAA
Upstream 100 bases:
>100_bases TTTTAAGGAAAAAATATATTACTTCGGGGTCTGAAAAGTAAAAGAAATAGCTTTTGTTCGGATCATGGGTTTAAGACAAA CTTACAAGGAATTCATCGAT
Downstream 100 bases:
>100_bases CTATGAAGATTAAAACCTTGAAACTTTGAAAAAAGAAACAGGAAAACGGGATAAAAGAACGAATTGAGAAAAAGAAAAGG GAAAAAGAAGCGACTTAATA
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase Type; Methyltransferase Domain-Containing Protein
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MTPEIPPKNFTPHLPEDYDARISGVLPYYSSFHQETINLVKSLPSSPKIWMDTGCGTGSLINKAIEEFLDTKFLLLDPSE SMLEQAKGKLSFYPDGKVEFLKASSTQEFSQELEEKPDVITAIQCHHYLSLEDRSRATRVCYNLLKEGGIYITFENIRPL TEEGVAVGKRYWGKFQSLHGRKEKEIQTHLERFDTEYFPITVEEHLKLLRDTGFRTVELFWYSYMQAGFYCIK
Sequences:
>Translated_233_residues MTPEIPPKNFTPHLPEDYDARISGVLPYYSSFHQETINLVKSLPSSPKIWMDTGCGTGSLINKAIEEFLDTKFLLLDPSE SMLEQAKGKLSFYPDGKVEFLKASSTQEFSQELEEKPDVITAIQCHHYLSLEDRSRATRVCYNLLKEGGIYITFENIRPL TEEGVAVGKRYWGKFQSLHGRKEKEIQTHLERFDTEYFPITVEEHLKLLRDTGFRTVELFWYSYMQAGFYCIK >Mature_232_residues TPEIPPKNFTPHLPEDYDARISGVLPYYSSFHQETINLVKSLPSSPKIWMDTGCGTGSLINKAIEEFLDTKFLLLDPSES MLEQAKGKLSFYPDGKVEFLKASSTQEFSQELEEKPDVITAIQCHHYLSLEDRSRATRVCYNLLKEGGIYITFENIRPLT EEGVAVGKRYWGKFQSLHGRKEKEIQTHLERFDTEYFPITVEEHLKLLRDTGFRTVELFWYSYMQAGFYCIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26999; Mature: 26868
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPEIPPKNFTPHLPEDYDARISGVLPYYSSFHQETINLVKSLPSSPKIWMDTGCGTGSL CCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHH INKAIEEFLDTKFLLLDPSESMLEQAKGKLSFYPDGKVEFLKASSTQEFSQELEEKPDVI HHHHHHHHHCCEEEEECCCHHHHHHHCCCEEECCCCCEEEEECCCHHHHHHHHHHCCCEE TAIQCHHYLSLEDRSRATRVCYNLLKEGGIYITFENIRPLTEEGVAVGKRYWGKFQSLHG EHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC RKEKEIQTHLERFDTEYFPITVEEHLKLLRDTGFRTVELFWYSYMQAGFYCIK CHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHCCCEECC >Mature Secondary Structure TPEIPPKNFTPHLPEDYDARISGVLPYYSSFHQETINLVKSLPSSPKIWMDTGCGTGSL CCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHH INKAIEEFLDTKFLLLDPSESMLEQAKGKLSFYPDGKVEFLKASSTQEFSQELEEKPDVI HHHHHHHHHCCEEEEECCCHHHHHHHCCCEEECCCCCEEEEECCCHHHHHHHHHHCCCEE TAIQCHHYLSLEDRSRATRVCYNLLKEGGIYITFENIRPLTEEGVAVGKRYWGKFQSLHG EHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC RKEKEIQTHLERFDTEYFPITVEEHLKLLRDTGFRTVELFWYSYMQAGFYCIK CHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA