Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226814

Identifier: 21226814

GI number: 21226814

Start: 858345

End: 859103

Strand: Direct

Name: 21226814

Synonym: MM_0712

Alternate gene names: NA

Gene position: 858345-859103 (Clockwise)

Preceding gene: 21226813

Following gene: 21226815

Centisome position: 20.95

GC content: 35.05

Gene sequence:

>759_bases
ATGTTTCGTCTTCGTTTAATTAGCGGATTCAATTTTGCTCCGATAATTGCAGACGCAATAGTTGATCTGAGTAAAGATTT
CTTTCAAAGCGATAATTCTGAGGTTTGCTGTGGCCAAATTCTTTATCTTGCTATATCTGATGAAGAAGGTCCTGGAAAAC
CGATTCTTGATTCAAAGCATGTAGAGGTTATCCTGACATTAGACCTTCCTGAGGATATGGATGTCTATGAAAAATTTGGT
TTATCAGCATACAGACAACATATATTGCTAAGGATTACTCAAGAAGCCAGAGACCAGAATGCTCTTTTAACGATAAAAGA
TCTTGTAAAACTCCTCAAAAGCAGTTACAGCACTATAATAAGAGACCTAAAGTACTTCAGAGAAAAAGGGCTTTATGTAC
CCCTAAGAGGTATCGTAAAAGACATTGGTCCTTCATCACATAAATCAAAAATTGTAGAGTTATATCTGAAAGGATACACA
ACTACTGAGATTCAGAGATCAACTAGACATTCGTTACAAAGCATAGAACGTTACATCAAAGACTTTTCTCGTGTCTCTAT
TCTCACACAGAAAGGTGAGTCAATAGACAATATCAGATTAATTGTTGGAATCTCAGAACGTTTGGTAAAAGAGTACCAAG
AACTTTTCATAAAATACAAGGATGGGGACAATAAACAAAGAGTAGAAGAGCTAATAGATAATATAACTGTTTATGATTCA
CCAATGAGTTTCAAAAAAAATTCGGGGATGAGAATGTGA

Upstream 100 bases:

>100_bases
AAACTCCTATTGGTTCATATGACACCACGACCTAAGTTTACAATTGGCGGTTCATATGAACGATATATATATTCTAAAGA
GTGGGATGACAAAGGAACAA

Downstream 100 bases:

>100_bases
AAGAGGACTGGTATAGAAAAATGTATGGCCCTTCGGCATCAAAAACCTATGAAACAAGTTTGTTCAACCTCATAACATCA
GAGTTTGGATACATTGGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MFRLRLISGFNFAPIIADAIVDLSKDFFQSDNSEVCCGQILYLAISDEEGPGKPILDSKHVEVILTLDLPEDMDVYEKFG
LSAYRQHILLRITQEARDQNALLTIKDLVKLLKSSYSTIIRDLKYFREKGLYVPLRGIVKDIGPSSHKSKIVELYLKGYT
TTEIQRSTRHSLQSIERYIKDFSRVSILTQKGESIDNIRLIVGISERLVKEYQELFIKYKDGDNKQRVEELIDNITVYDS
PMSFKKNSGMRM

Sequences:

>Translated_252_residues
MFRLRLISGFNFAPIIADAIVDLSKDFFQSDNSEVCCGQILYLAISDEEGPGKPILDSKHVEVILTLDLPEDMDVYEKFG
LSAYRQHILLRITQEARDQNALLTIKDLVKLLKSSYSTIIRDLKYFREKGLYVPLRGIVKDIGPSSHKSKIVELYLKGYT
TTEIQRSTRHSLQSIERYIKDFSRVSILTQKGESIDNIRLIVGISERLVKEYQELFIKYKDGDNKQRVEELIDNITVYDS
PMSFKKNSGMRM
>Mature_252_residues
MFRLRLISGFNFAPIIADAIVDLSKDFFQSDNSEVCCGQILYLAISDEEGPGKPILDSKHVEVILTLDLPEDMDVYEKFG
LSAYRQHILLRITQEARDQNALLTIKDLVKLLKSSYSTIIRDLKYFREKGLYVPLRGIVKDIGPSSHKSKIVELYLKGYT
TTEIQRSTRHSLQSIERYIKDFSRVSILTQKGESIDNIRLIVGISERLVKEYQELFIKYKDGDNKQRVEELIDNITVYDS
PMSFKKNSGMRM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29056; Mature: 29056

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRLRLISGFNFAPIIADAIVDLSKDFFQSDNSEVCCGQILYLAISDEEGPGKPILDSKH
CEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCCCC
VEVILTLDLPEDMDVYEKFGLSAYRQHILLRITQEARDQNALLTIKDLVKLLKSSYSTII
EEEEEEECCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH
RDLKYFREKGLYVPLRGIVKDIGPSSHKSKIVELYLKGYTTTEIQRSTRHSLQSIERYIK
HHHHHHHHCCCEEEHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
DFSRVSILTQKGESIDNIRLIVGISERLVKEYQELFIKYKDGDNKQRVEELIDNITVYDS
HHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCEEECC
PMSFKKNSGMRM
CCCCCCCCCCCC
>Mature Secondary Structure
MFRLRLISGFNFAPIIADAIVDLSKDFFQSDNSEVCCGQILYLAISDEEGPGKPILDSKH
CEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCCCC
VEVILTLDLPEDMDVYEKFGLSAYRQHILLRITQEARDQNALLTIKDLVKLLKSSYSTII
EEEEEEECCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH
RDLKYFREKGLYVPLRGIVKDIGPSSHKSKIVELYLKGYTTTEIQRSTRHSLQSIERYIK
HHHHHHHHCCCEEEHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
DFSRVSILTQKGESIDNIRLIVGISERLVKEYQELFIKYKDGDNKQRVEELIDNITVYDS
HHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCEEECC
PMSFKKNSGMRM
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA