Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226810

Identifier: 21226810

GI number: 21226810

Start: 853539

End: 854588

Strand: Direct

Name: 21226810

Synonym: MM_0708

Alternate gene names: NA

Gene position: 853539-854588 (Clockwise)

Preceding gene: 21226809

Following gene: 21226813

Centisome position: 20.84

GC content: 49.05

Gene sequence:

>1050_bases
ATGGCCTGGATAGAACCGGAAGTAACAGAAAAACCTAAAAAACCGATGTTTTTGTGCGTACTTTCCAGCACGAAGACAGC
ACATATTCCAAAACTCTCGGCAGCAGGAAAAACAGCTGAACTTACAGACTACACGCCTGCGGGGGATGCGGAACTTATGG
AAACAGGAAACATTATCAGTGTACCGGTGCTTCCCATGACTCCTCCTTATGACACGCCTACCCCTGCAATTATGACCCGT
TCGGCGCTGAAGCTTACGGACGCTCCCTACCATTTTATAAATTCGGGCTTAATAGTGACTCCGGATGTCCCGTGCATCGA
CCTGAAAGCAAATCCCGGAGAAGACATAAGAGAGCCTGTTGCAGTAATGGATGTGCAGGGTATATACGAAAGGGCGAAGC
TCCTTGCAAAGCGGCTCAGAAACCAGGCAGACCACGTGGTGATCGGGGAAAGCATTCCCGGAGGCACAACAACGGCAATG
GGAGTTTTAATGGCGCTCGGGTATAATGGGAATGTCAGCAGTAGCGCAGATGAAAACCCTCTTGAGCTTAAAAAACAGGT
TGTCGAAGAGGGGATGAAAGCTTCAGGCCTTACATTTGGCTGCCTTAAAGACGACCCCATGAAAGCTATTGCCTGCATGG
GAGACCCCATGATGCCTGCAGTTGCAGGGCTTGTTGCGGGTTTTCAGGACACTGATACCAGCGTTGTCCTTGCCGGCGGA
ACTCAAATGGCAGCTGTTTATGCTCTCATTAAACACATGGGCTTAAATACGGAAAAAATTGCAATTGCAACTACCCGCTA
TGTTGTGGAAGACAAATCCGCAAATTTCATTCAGCTGACCACAACTCTTGGCGTACCTGTAGTTTATGTTGCAGACCCCG
GATTTGGCAAGTCCAGCATGAAAGGGCTTCACAGGTATGAGACCGGAACTATAAAAGAAGGTGCTGGTGCCGGCGGAGCC
ATGTATCTTGCAGGGCTTTTCGGTATTACTCAGGACCAGTTCAGGACAGAAGTGGAAAATGTCTGCAAACTGCTTAAAGC
TGGGCACTGA

Upstream 100 bases:

>100_bases
GATGTTTAGTATTGAATCTGAAGGTCTGTACAGAATCCCGGAAAAAATATATTGAAATTTTCTAAAAACTTATCTTCAAA
ATTTCATAGAGGAGATATGA

Downstream 100 bases:

>100_bases
AGAAAAACTGCTTAAAAAATAAATTTTACAAAATTTATATTTTTTTATATAGAAGTCAGCTGAATTTTTCTTACATAATA
CACAGGAAATCACTACACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MAWIEPEVTEKPKKPMFLCVLSSTKTAHIPKLSAAGKTAELTDYTPAGDAELMETGNIISVPVLPMTPPYDTPTPAIMTR
SALKLTDAPYHFINSGLIVTPDVPCIDLKANPGEDIREPVAVMDVQGIYERAKLLAKRLRNQADHVVIGESIPGGTTTAM
GVLMALGYNGNVSSSADENPLELKKQVVEEGMKASGLTFGCLKDDPMKAIACMGDPMMPAVAGLVAGFQDTDTSVVLAGG
TQMAAVYALIKHMGLNTEKIAIATTRYVVEDKSANFIQLTTTLGVPVVYVADPGFGKSSMKGLHRYETGTIKEGAGAGGA
MYLAGLFGITQDQFRTEVENVCKLLKAGH

Sequences:

>Translated_349_residues
MAWIEPEVTEKPKKPMFLCVLSSTKTAHIPKLSAAGKTAELTDYTPAGDAELMETGNIISVPVLPMTPPYDTPTPAIMTR
SALKLTDAPYHFINSGLIVTPDVPCIDLKANPGEDIREPVAVMDVQGIYERAKLLAKRLRNQADHVVIGESIPGGTTTAM
GVLMALGYNGNVSSSADENPLELKKQVVEEGMKASGLTFGCLKDDPMKAIACMGDPMMPAVAGLVAGFQDTDTSVVLAGG
TQMAAVYALIKHMGLNTEKIAIATTRYVVEDKSANFIQLTTTLGVPVVYVADPGFGKSSMKGLHRYETGTIKEGAGAGGA
MYLAGLFGITQDQFRTEVENVCKLLKAGH
>Mature_348_residues
AWIEPEVTEKPKKPMFLCVLSSTKTAHIPKLSAAGKTAELTDYTPAGDAELMETGNIISVPVLPMTPPYDTPTPAIMTRS
ALKLTDAPYHFINSGLIVTPDVPCIDLKANPGEDIREPVAVMDVQGIYERAKLLAKRLRNQADHVVIGESIPGGTTTAMG
VLMALGYNGNVSSSADENPLELKKQVVEEGMKASGLTFGCLKDDPMKAIACMGDPMMPAVAGLVAGFQDTDTSVVLAGGT
QMAAVYALIKHMGLNTEKIAIATTRYVVEDKSANFIQLTTTLGVPVVYVADPGFGKSSMKGLHRYETGTIKEGAGAGGAM
YLAGLFGITQDQFRTEVENVCKLLKAGH

Specific function: Unknown

COG id: COG2038

COG function: function code H; NaMN:DMB phosphoribosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0284 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y708_METMA (Q8PYZ0)

Other databases:

- EMBL:   AE008384
- RefSeq:   NP_632732.1
- ProteinModelPortal:   Q8PYZ0
- GeneID:   1479050
- GenomeReviews:   AE008384_GR
- KEGG:   mma:MM_0708
- NMPDR:   fig|192952.1.peg.708
- HOGENOM:   HBG497525
- OMA:   QMLAVYA
- ProtClustDB:   PRK04447
- BioCyc:   MMAZ192952:MM0708-MONOMER
- HAMAP:   MF_01086
- InterPro:   IPR003200
- InterPro:   IPR002805
- TIGRFAMs:   TIGR00303

Pfam domain/function: PF02277 DBI_PRT; SSF52733 NN:DBI_PRT

EC number: NA

Molecular weight: Translated: 37006; Mature: 36875

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWIEPEVTEKPKKPMFLCVLSSTKTAHIPKLSAAGKTAELTDYTPAGDAELMETGNIIS
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEE
VPVLPMTPPYDTPTPAIMTRSALKLTDAPYHFINSGLIVTPDVPCIDLKANPGEDIREPV
EEEECCCCCCCCCCHHHHHHHHHEECCCCHHHHCCCEEECCCCCEEEECCCCCHHHHCCH
AVMDVQGIYERAKLLAKRLRNQADHVVIGESIPGGTTTAMGVLMALGYNGNVSSSADENP
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCH
LELKKQVVEEGMKASGLTFGCLKDDPMKAIACMGDPMMPAVAGLVAGFQDTDTSVVLAGG
HHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECC
TQMAAVYALIKHMGLNTEKIAIATTRYVVEDKSANFIQLTTTLGVPVVYVADPGFGKSSM
HHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCEEEEEEECCCCEEEEECCCCCHHHH
KGLHRYETGTIKEGAGAGGAMYLAGLFGITQDQFRTEVENVCKLLKAGH
HHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AWIEPEVTEKPKKPMFLCVLSSTKTAHIPKLSAAGKTAELTDYTPAGDAELMETGNIIS
CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEE
VPVLPMTPPYDTPTPAIMTRSALKLTDAPYHFINSGLIVTPDVPCIDLKANPGEDIREPV
EEEECCCCCCCCCCHHHHHHHHHEECCCCHHHHCCCEEECCCCCEEEECCCCCHHHHCCH
AVMDVQGIYERAKLLAKRLRNQADHVVIGESIPGGTTTAMGVLMALGYNGNVSSSADENP
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCH
LELKKQVVEEGMKASGLTFGCLKDDPMKAIACMGDPMMPAVAGLVAGFQDTDTSVVLAGG
HHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECC
TQMAAVYALIKHMGLNTEKIAIATTRYVVEDKSANFIQLTTTLGVPVVYVADPGFGKSSM
HHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCEEEEEEECCCCEEEEECCCCCHHHH
KGLHRYETGTIKEGAGAGGAMYLAGLFGITQDQFRTEVENVCKLLKAGH
HHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12125824