Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is wcaE [C]
Identifier: 21226755
GI number: 21226755
Start: 783756
End: 784502
Strand: Reverse
Name: wcaE [C]
Synonym: MM_0653
Alternate gene names: 21226755
Gene position: 784502-783756 (Counterclockwise)
Preceding gene: 21226756
Following gene: 21226754
Centisome position: 19.15
GC content: 29.72
Gene sequence:
>747_bases ATGGGTCCAAAAGTTTCAGTAATAACAGTTTGCTATAATGCTGAAGAATTTATTGAAAATGCAATATATAGCGTTTTGAA TCAATCATATGAGAACATTGAATATATTATAATCGATGGCGCCTCGAAAGATAATACTGTGTCAATAATAAATAAATACA GATCCGTGATGGCATGTTTCATAAGTGAGCCAGATAAAGGCATGTATGAAGCAATGAATAAAGGAATAAAAGCTGCTACT GGTGACATATTATACTTTTTGAACTCAGATGATGTATTTTATGACGAGTATGTTGTAGAAAATGTTGTTAAAGTGTTTCA GAAGAATAACAATGTCGAACTCATCTATGGTCCTATAATTATTAGAGACCCTACTACAAATGAGTCATTTATAAAGCCTC ATGATTATATTACAAAATCATATTTCATCTATAACTCAATCTGTCAACAAGGAATATTTTACAAAGCTAGTGTATTTAAT AAATGCGGCCAATTTAACGATACATATAAAATCGTAGGCGATTACGAGTGGGAATTGAGAGCATTTTATAAATATAACAT TAAAAGGAAATACTATGAAGGTATAATTGCAATATTCAGGGATGGGGGAATGTGCAATTGTGATAAGTTTTCAGATCTTC ATGCCAAAGAAAGAACAAAAGTCATAAAGGAATATTTCAATATATTTGTAATATATAAATATAAATTTCTGCTGTTTTGT AGATCTGCCATAAAAAGATTAGAGTAA
Upstream 100 bases:
>100_bases TAAAAGGATTTCAACAGGAAAAAAAATTCAGTTGGGATAAAACTGCAAGTGAAACGTTTAATGTTTATAAATCTATCATA TCCTAATTAAAGGTAAAACT
Downstream 100 bases:
>100_bases ATCTTTTGTTTGAAATAACTGTGGAGAACTTTGGTAAACATTTGACTTCAACATTAAGTTCGAGACGCAAGAAACAAACA GAGTTTGGAAAGATTTCAAG
Product: cell wall biogenesis glycosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MGPKVSVITVCYNAEEFIENAIYSVLNQSYENIEYIIIDGASKDNTVSIINKYRSVMACFISEPDKGMYEAMNKGIKAAT GDILYFLNSDDVFYDEYVVENVVKVFQKNNNVELIYGPIIIRDPTTNESFIKPHDYITKSYFIYNSICQQGIFYKASVFN KCGQFNDTYKIVGDYEWELRAFYKYNIKRKYYEGIIAIFRDGGMCNCDKFSDLHAKERTKVIKEYFNIFVIYKYKFLLFC RSAIKRLE
Sequences:
>Translated_248_residues MGPKVSVITVCYNAEEFIENAIYSVLNQSYENIEYIIIDGASKDNTVSIINKYRSVMACFISEPDKGMYEAMNKGIKAAT GDILYFLNSDDVFYDEYVVENVVKVFQKNNNVELIYGPIIIRDPTTNESFIKPHDYITKSYFIYNSICQQGIFYKASVFN KCGQFNDTYKIVGDYEWELRAFYKYNIKRKYYEGIIAIFRDGGMCNCDKFSDLHAKERTKVIKEYFNIFVIYKYKFLLFC RSAIKRLE >Mature_247_residues GPKVSVITVCYNAEEFIENAIYSVLNQSYENIEYIIIDGASKDNTVSIINKYRSVMACFISEPDKGMYEAMNKGIKAATG DILYFLNSDDVFYDEYVVENVVKVFQKNNNVELIYGPIIIRDPTTNESFIKPHDYITKSYFIYNSICQQGIFYKASVFNK CGQFNDTYKIVGDYEWELRAFYKYNIKRKYYEGIIAIFRDGGMCNCDKFSDLHAKERTKVIKEYFNIFVIYKYKFLLFCR SAIKRLE
Specific function: Involved in glycosylation steps downstream of mono-O- methyl-glycosyl-p-hydroxybenzoic acid derivative (p-HBAD I) and 2- O-methyl-rhamnosyl-phenolphthiocerol dimycocerosate (mycoside B) during the p-hydroxybenzoic acid derivatives (p-HBAD) and glycosylate
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788368, Length=212, Percent_Identity=29.7169811320755, Blast_Score=80, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 29074; Mature: 28942
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPKVSVITVCYNAEEFIENAIYSVLNQSYENIEYIIIDGASKDNTVSIINKYRSVMACF CCCCEEEEEEEECHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH ISEPDKGMYEAMNKGIKAATGDILYFLNSDDVFYDEYVVENVVKVFQKNNNVELIYGPII HCCCCCHHHHHHHCCCCCCCCCEEEEECCCCEEHHHHHHHHHHHHHHCCCCEEEEECCEE IRDPTTNESFIKPHDYITKSYFIYNSICQQGIFYKASVFNKCGQFNDTYKIVGDYEWELR EECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEHHHHHHHCCCCCCCEEEEECCCEEEE AFYKYNIKRKYYEGIIAIFRDGGMCNCDKFSDLHAKERTKVIKEYFNIFVIYKYKFLLFC EEEEECCHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHEEHHHHHHHHHHH RSAIKRLE HHHHHHCC >Mature Secondary Structure GPKVSVITVCYNAEEFIENAIYSVLNQSYENIEYIIIDGASKDNTVSIINKYRSVMACF CCCEEEEEEEECHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH ISEPDKGMYEAMNKGIKAATGDILYFLNSDDVFYDEYVVENVVKVFQKNNNVELIYGPII HCCCCCHHHHHHHCCCCCCCCCEEEEECCCCEEHHHHHHHHHHHHHHCCCCEEEEECCEE IRDPTTNESFIKPHDYITKSYFIYNSICQQGIFYKASVFNKCGQFNDTYKIVGDYEWELR EECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEHHHHHHHCCCCCCCEEEEECCCEEEE AFYKYNIKRKYYEGIIAIFRDGGMCNCDKFSDLHAKERTKVIKEYFNIFVIYKYKFLLFC EEEEECCHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHEEHHHHHHHHHHH RSAIKRLE HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]