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The map label for this gene is rps27ae

Identifier: 21226702

GI number: 21226702

Start: 729156

End: 729305

Strand: Direct

Name: rps27ae

Synonym: MM_0600

Alternate gene names: 21226702

Gene position: 729156-729305 (Clockwise)

Preceding gene: 21226701

Following gene: 21226703

Centisome position: 17.8

GC content: 50.67

Gene sequence:

>150_bases
ATGGCAGTAAAAGATTATTACAAAGTCCAGGGCGACTCCGTAACCAGACTCAAACAGTTCTGTCCCAGATGCGGACCCGG
TGTATTCCTTGCCGACCACAAAAACCGCCTCGCCTGCGGGAAGTGCGGCTACACCGAATTCAAGAAATAA

Upstream 100 bases:

>100_bases
CATGAAACAGGTAGAACAGGAATATGTCCTTAAAAGGAACGCTGTCCCTGGTTCGGAAACTGAGGGAGAAGAGGCTTAAG
CCTTACCGAGGTGTATAAAC

Downstream 100 bases:

>100_bases
CCCGCAAGGGAAATCATAACTCATTTTTCAACCCGGAGCGCAGGAATTTTCCTGCAGCTCCTTTTACTCAGGTCTTTTTA
CAGAAGAAAATACCTCATAT

Product: 30S ribosomal protein S27ae

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 49; Mature: 48

Protein sequence:

>49_residues
MAVKDYYKVQGDSVTRLKQFCPRCGPGVFLADHKNRLACGKCGYTEFKK

Sequences:

>Translated_49_residues
MAVKDYYKVQGDSVTRLKQFCPRCGPGVFLADHKNRLACGKCGYTEFKK
>Mature_48_residues
AVKDYYKVQGDSVTRLKQFCPRCGPGVFLADHKNRLACGKCGYTEFKK

Specific function: Unknown

COG id: COG1998

COG function: function code J; Ribosomal protein S27AE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S27Ae family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS27A_METAC (Q8TJT1)

Other databases:

- EMBL:   AE010299
- RefSeq:   NP_618571.1
- ProteinModelPortal:   Q8TJT1
- SMR:   Q8TJT1
- GeneID:   1475589
- GenomeReviews:   AE010299_GR
- KEGG:   mac:MA3696
- HOGENOM:   HBG512791
- ProtClustDB:   PRK00432
- BioCyc:   MACE188937:MA3696-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00777
- InterPro:   IPR002906
- InterPro:   IPR022845

Pfam domain/function: PF01599 Ribosomal_S27

EC number: NA

Molecular weight: Translated: 5559; Mature: 5427

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
8.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVKDYYKVQGDSVTRLKQFCPRCGPGVFLADHKNRLACGKCGYTEFKK
CCCCCCEEECCCCHHHHHHHCCCCCCCEEEECCCCCEECCCCCCCCCCC
>Mature Secondary Structure 
AVKDYYKVQGDSVTRLKQFCPRCGPGVFLADHKNRLACGKCGYTEFKK
CCCCCEEECCCCHHHHHHHCCCCCCCEEEECCCCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11932238