Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226700

Identifier: 21226700

GI number: 21226700

Start: 728261

End: 728848

Strand: Direct

Name: 21226700

Synonym: MM_0598

Alternate gene names: NA

Gene position: 728261-728848 (Clockwise)

Preceding gene: 21226699

Following gene: 21226701

Centisome position: 17.78

GC content: 44.22

Gene sequence:

>588_bases
TTGAGTGTTCATATCGAACTTCCGAGAGAACTTCGCCCACTTATGAAAAAACCCCTCGGTATTTTATACAGAGGAAAGGG
CAGGGATACGATAGAGAAGTTTGCAGGGGAACTTTCAAGCCCCACAAAACTTATATCCGTAGGGGATGTTACTACCTTCC
ACCTGCTCGAAGCCGGAATTATTCCGGACATCTGTATTGTGGATGACCGAACCAAAAGGAAACCGGTATCCAGCGATGTT
TCGGTCCGGAACAGGGACAAAGTATATGAAGAAGTTTCGGTTGACAATCCTGCAGGAATAATCACCGATGAGCTTATAAG
AACTCTCTGCGAAGCGTTTGCTTCGGAAAAGCTTCTCCGCATTTTTGTAAGGGGAGAAGAAGATCTGGCAACCCTTCCGG
TAATCCTTCTGGCTCCACCGGGGTCTGTTGTCCTTTACGGACAGCCCGATGAGGGCGTGGTCTTTGTAGAGGTCACCGAG
AAAAAGAAAGAGGAAATAAGAGCTCTTTTTGAAAAGCTTATCAGTAAAAATCAGAATAATGAATTGGATAAAATACGGAG
AATCCTAGATGGACATAAAGATAATTAA

Upstream 100 bases:

>100_bases
TGGAATGGACTTGTTATTATTCTTGATACCGAACGCTCGGAAATCGCAAAAAGACTCGGGGTTGACATCCCGGATAGATT
TGCTTTGAAGGTGCGCTGAG

Downstream 100 bases:

>100_bases
AGACAAAAAGAATCCACTTTTAAACAGAAGGGAACTGGATTTCATTGTGAAATATGAAGGTTCGACTCCTTCCAGAAATG
ATGTAAGGAACAAGCTTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MSVHIELPRELRPLMKKPLGILYRGKGRDTIEKFAGELSSPTKLISVGDVTTFHLLEAGIIPDICIVDDRTKRKPVSSDV
SVRNRDKVYEEVSVDNPAGIITDELIRTLCEAFASEKLLRIFVRGEEDLATLPVILLAPPGSVVLYGQPDEGVVFVEVTE
KKKEEIRALFEKLISKNQNNELDKIRRILDGHKDN

Sequences:

>Translated_195_residues
MSVHIELPRELRPLMKKPLGILYRGKGRDTIEKFAGELSSPTKLISVGDVTTFHLLEAGIIPDICIVDDRTKRKPVSSDV
SVRNRDKVYEEVSVDNPAGIITDELIRTLCEAFASEKLLRIFVRGEEDLATLPVILLAPPGSVVLYGQPDEGVVFVEVTE
KKKEEIRALFEKLISKNQNNELDKIRRILDGHKDN
>Mature_194_residues
SVHIELPRELRPLMKKPLGILYRGKGRDTIEKFAGELSSPTKLISVGDVTTFHLLEAGIIPDICIVDDRTKRKPVSSDVS
VRNRDKVYEEVSVDNPAGIITDELIRTLCEAFASEKLLRIFVRGEEDLATLPVILLAPPGSVVLYGQPDEGVVFVEVTEK
KKEEIRALFEKLISKNQNNELDKIRRILDGHKDN

Specific function: Unknown

COG id: COG1909

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0218 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007164 [H]

Pfam domain/function: PF04019 DUF359 [H]

EC number: NA

Molecular weight: Translated: 21901; Mature: 21769

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVHIELPRELRPLMKKPLGILYRGKGRDTIEKFAGELSSPTKLISVGDVTTFHLLEAGI
CEEEEECCHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCC
IPDICIVDDRTKRKPVSSDVSVRNRDKVYEEVSVDNPAGIITDELIRTLCEAFASEKLLR
CCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IFVRGEEDLATLPVILLAPPGSVVLYGQPDEGVVFVEVTEKKKEEIRALFEKLISKNQNN
HHHCCCCCCCCCCEEEEECCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCC
ELDKIRRILDGHKDN
HHHHHHHHHCCCCCC
>Mature Secondary Structure 
SVHIELPRELRPLMKKPLGILYRGKGRDTIEKFAGELSSPTKLISVGDVTTFHLLEAGI
EEEEECCHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCC
IPDICIVDDRTKRKPVSSDVSVRNRDKVYEEVSVDNPAGIITDELIRTLCEAFASEKLLR
CCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IFVRGEEDLATLPVILLAPPGSVVLYGQPDEGVVFVEVTEKKKEEIRALFEKLISKNQNN
HHHCCCCCCCCCCEEEEECCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCC
ELDKIRRILDGHKDN
HHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]