Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is phoU [H]
Identifier: 21226678
GI number: 21226678
Start: 703310
End: 703969
Strand: Reverse
Name: phoU [H]
Synonym: MM_0576
Alternate gene names: 21226678
Gene position: 703969-703310 (Counterclockwise)
Preceding gene: 21226679
Following gene: 21226677
Centisome position: 17.19
GC content: 41.06
Gene sequence:
>660_bases ATGATTAAAATGATTAGAGTACAATACTTTCAGCAGTTAGACCTCCTCAAAAGGTCCATACTTTCTTTAGGAGAAATGTC TGAACTGATCTTTAAAGACTCAATGGAAGCAGTTATGGACCTCAATGTTGTGCTTGCCAATAAGACTCTTGCCCTTGAGC CCGGAGTGGACAAACTTGAGGAAGGGATTGAGTCTTCTATTTTTGATCTTCTTGCGCTTCAGCAGCCTATGGCAAGTGAC CTCCGCCTTGTCGTGTCCGCAATTAAGATTGAAGCAGATCTTAAAAGAATCTTGGAACTCTCGATCAATATTGCCAGAAT ACCCGGAAAAATTGAAGGCGGCCATATAAAGCCTCTTATAGACACAAAAAAAATGGCAGATATTACAGCATATATGCTTG AGAATTCCATTAAGGCTTTTAAAAATCATGACCCCAGACTCGCAAGGGAAACAGCAGCCCGGGATGATGAGGTAGACAAA CTCTTTTATGCAGTCTGGGTTGAGCTGATAGAAATGATGGCAAAAGATACAAGCATTATTTCCAGAGCCACATATTTGCT TTTCCTGATTCGCTATATTGAAAGGATTGCTGACCATTGCTGTAATATTTGTGAGAGCGTGGTTTACCTCACGACGGCTG AGCATGTCAAACTTAACTGA
Upstream 100 bases:
>100_bases TTCGTTCGGCCCCGACCTGGAATGAAACCTCAGATCGGCTCGAATCTTTTCAAAATCCCAGGGAAAAAAGCACTGAAGAT TACATTACTGGCAGGTTCGG
Downstream 100 bases:
>100_bases ACCGATTTTTTGGTTGCCCGATGTCTACTAATTCAATTATTTTTGGGATGAGTCAAAAAACTTTGTTAGTGCCTCAGCAA GGATTTCAGAAGTATTTCTC
Product: phosphate transporter PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MIKMIRVQYFQQLDLLKRSILSLGEMSELIFKDSMEAVMDLNVVLANKTLALEPGVDKLEEGIESSIFDLLALQQPMASD LRLVVSAIKIEADLKRILELSINIARIPGKIEGGHIKPLIDTKKMADITAYMLENSIKAFKNHDPRLARETAARDDEVDK LFYAVWVELIEMMAKDTSIISRATYLLFLIRYIERIADHCCNICESVVYLTTAEHVKLN
Sequences:
>Translated_219_residues MIKMIRVQYFQQLDLLKRSILSLGEMSELIFKDSMEAVMDLNVVLANKTLALEPGVDKLEEGIESSIFDLLALQQPMASD LRLVVSAIKIEADLKRILELSINIARIPGKIEGGHIKPLIDTKKMADITAYMLENSIKAFKNHDPRLARETAARDDEVDK LFYAVWVELIEMMAKDTSIISRATYLLFLIRYIERIADHCCNICESVVYLTTAEHVKLN >Mature_219_residues MIKMIRVQYFQQLDLLKRSILSLGEMSELIFKDSMEAVMDLNVVLANKTLALEPGVDKLEEGIESSIFDLLALQQPMASD LRLVVSAIKIEADLKRILELSINIARIPGKIEGGHIKPLIDTKKMADITAYMLENSIKAFKNHDPRLARETAARDDEVDK LFYAVWVELIEMMAKDTSIISRATYLLFLIRYIERIADHCCNICESVVYLTTAEHVKLN
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=216, Percent_Identity=28.7037037037037, Blast_Score=92, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 24901; Mature: 24901
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKMIRVQYFQQLDLLKRSILSLGEMSELIFKDSMEAVMDLNVVLANKTLALEPGVDKLE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEECCCHHHHH EGIESSIFDLLALQQPMASDLRLVVSAIKIEADLKRILELSINIARIPGKIEGGHIKPLI HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH DTKKMADITAYMLENSIKAFKNHDPRLARETAARDDEVDKLFYAVWVELIEMMAKDTSII HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SRATYLLFLIRYIERIADHCCNICESVVYLTTAEHVKLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC >Mature Secondary Structure MIKMIRVQYFQQLDLLKRSILSLGEMSELIFKDSMEAVMDLNVVLANKTLALEPGVDKLE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEECCCHHHHH EGIESSIFDLLALQQPMASDLRLVVSAIKIEADLKRILELSINIARIPGKIEGGHIKPLI HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH DTKKMADITAYMLENSIKAFKNHDPRLARETAARDDEVDKLFYAVWVELIEMMAKDTSII HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SRATYLLFLIRYIERIADHCCNICESVVYLTTAEHVKLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]