Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is phoB [H]
Identifier: 21226674
GI number: 21226674
Start: 697918
End: 699669
Strand: Reverse
Name: phoB [H]
Synonym: MM_0572
Alternate gene names: 21226674
Gene position: 699669-697918 (Counterclockwise)
Preceding gene: 21226677
Following gene: 21226673
Centisome position: 17.08
GC content: 44.18
Gene sequence:
>1752_bases ATGGATACTAAAGAAACAAATGTTCTACTAACCCTCCTCGTAGGGCTTCTGCTACTGGGAAATGCTGGTTCTGCAGCAGC TGTGGAAGATGATTCAAATAGCAAAGATTTTTCAGGTAATTATACCTGTCTCACTGATTCCTTAAAATGTAAATCTTGTC CAGAATCGGAAGCTAAAATTAAAAACGTGATAATCTTGGTTCCAGATGGGTGTTTTCAGAGTGTCCAGACTCTTGCCAGA TGGTACAGTGGAAGTCCTCTAATGCTTGATGAAATGGTCGCAGGAACGGTCTCTACTTACAGTACAGACTCAGTTATTAC TGATTCTTCATCAGCTGCAAGTGCTTTTGCTACCGGATACAAGACAACCAACGGCTTTGTAAGTGTCGGACCGAGCAATG CTTCAGTTTTAAGTATACTGGAAAACCCTTCTGAAGATATGCAATACAGACCGCTTGCAACAGTGCTTGAAGGGTCAAAG CTTGAAGGCAAGGCTACAGGGCTTGTAGCAACTTCCCGGGTCACCCATGCTACACCTGCAGCTTTTGCTTCTCACGTGGA TAACAGGGATAACGAAAACGAGATCATGGAACAGATGGTCTATGAAAATGTTGATGTGGTTTTCGGAGGAGGTTCCCGCC ATCTAGTGCCTGAAGAAGAAGGTGGAAAAAGGACAGATAGAGAAAACCTGACAGAAGTGCTTCTTGATAGGGGTTACCAG TATGTTGACAGCAGAGATGAAATGTTGAATCTGTCATCCGGAAAAGCATGGGGCCTTTTTGCCAGCAGTCACATGGCACC GGATATTGATCGTACCGAACTTGTACCTGAAGAACCCTCTCTTTCAGAAATGACCGGAAAAGCCCTAGAACTGCTTTCAC AGGACAAAGATGGCTTTTTCCTTCTGGTGGAAGGTAGCCAGGTAGACTGGGCAAATCACGCTAATGACCCTGTTTATGCT GTTACGGACTTCCTGGCTTTTGATGAAGCTGTTAAGGTTGCAGTTGAATTTGCAGAACAAGATGGACATACCCTTGTCCT CGCTTTCCCTGACCACAATACAGGCGGGATGACCATTGGTAGTGATTCTGATTCTAATTATACTTCTACAACCATAGAAG ATGTCATTGATCCTCTCAAAAGCATGAAGCTCAGCTCTGCAGGTATTGCGGAAAAAATAGGAACAGATGTTTCCTCCGAA AATATTAAGACTCAGCTAAAAACCTGGTGGGGAATTGATGCTACTGATGATGAAGTAACTGAAATTCTTGAAATCTATAA CAATGGAGAGGGCCTTTCCCTCGATTATGCAATCAGCGAAGTAATCGATCAAAATCATACTGTTATCGGGTGGACTACTC ATGGACATTGTGGTGAAGATGTCCCTCTCTGGGCTTATGGTCCTGACCACCCCGCAGGTCACCTGGATAACACAGAAATT GCAGGATATATCGCTGAAAAAGCCGGTTTCAACCTGGAGGAAACAAATAGGTACCTGTTTGTTGAAGTGAGTGAGGTATT CTCCAGAGACAACGGAGACGGGAAACTGGATGAAAATGAATATCTGCTGGACCTGACAAGCTCCTTAAACCCTGTGCTGA GGATAGGAGATGCCGAACTACCGGTAAGCACAAATATTCTCATCAAACAAGGCGTAACTTATGAGCTCGAAGGAATAGTC GTTTATGCTCCGGCGACAGGTAAAGTTTACATCCCTTCCGAAGTGCTTTCACTGGTCAATGGGAAAAAGTAA
Upstream 100 bases:
>100_bases ATACAGCTGGCTACCTCTTCAAATTTGAGATAAAAAATTTGAGTATAGTCCGAAATAGAGCCTGCTCTTAAAAGCATGTT CTCAATTTGAGGTAGTTTTA
Downstream 100 bases:
>100_bases ATAGAGCCGAAGTGAGAAGAGCCTGCCTGAAATTTGAATTAATTAAAGGGGATTATTTCCCTTTTCCTGTTTTTTGGTCG TGACTTATCAGGAGGCTTGT
Product: alkaline phosphatase
Products: NA
Alternate protein names: Alkaline phosphatase III; APase III [H]
Number of amino acids: Translated: 583; Mature: 583
Protein sequence:
>583_residues MDTKETNVLLTLLVGLLLLGNAGSAAAVEDDSNSKDFSGNYTCLTDSLKCKSCPESEAKIKNVIILVPDGCFQSVQTLAR WYSGSPLMLDEMVAGTVSTYSTDSVITDSSSAASAFATGYKTTNGFVSVGPSNASVLSILENPSEDMQYRPLATVLEGSK LEGKATGLVATSRVTHATPAAFASHVDNRDNENEIMEQMVYENVDVVFGGGSRHLVPEEEGGKRTDRENLTEVLLDRGYQ YVDSRDEMLNLSSGKAWGLFASSHMAPDIDRTELVPEEPSLSEMTGKALELLSQDKDGFFLLVEGSQVDWANHANDPVYA VTDFLAFDEAVKVAVEFAEQDGHTLVLAFPDHNTGGMTIGSDSDSNYTSTTIEDVIDPLKSMKLSSAGIAEKIGTDVSSE NIKTQLKTWWGIDATDDEVTEILEIYNNGEGLSLDYAISEVIDQNHTVIGWTTHGHCGEDVPLWAYGPDHPAGHLDNTEI AGYIAEKAGFNLEETNRYLFVEVSEVFSRDNGDGKLDENEYLLDLTSSLNPVLRIGDAELPVSTNILIKQGVTYELEGIV VYAPATGKVYIPSEVLSLVNGKK
Sequences:
>Translated_583_residues MDTKETNVLLTLLVGLLLLGNAGSAAAVEDDSNSKDFSGNYTCLTDSLKCKSCPESEAKIKNVIILVPDGCFQSVQTLAR WYSGSPLMLDEMVAGTVSTYSTDSVITDSSSAASAFATGYKTTNGFVSVGPSNASVLSILENPSEDMQYRPLATVLEGSK LEGKATGLVATSRVTHATPAAFASHVDNRDNENEIMEQMVYENVDVVFGGGSRHLVPEEEGGKRTDRENLTEVLLDRGYQ YVDSRDEMLNLSSGKAWGLFASSHMAPDIDRTELVPEEPSLSEMTGKALELLSQDKDGFFLLVEGSQVDWANHANDPVYA VTDFLAFDEAVKVAVEFAEQDGHTLVLAFPDHNTGGMTIGSDSDSNYTSTTIEDVIDPLKSMKLSSAGIAEKIGTDVSSE NIKTQLKTWWGIDATDDEVTEILEIYNNGEGLSLDYAISEVIDQNHTVIGWTTHGHCGEDVPLWAYGPDHPAGHLDNTEI AGYIAEKAGFNLEETNRYLFVEVSEVFSRDNGDGKLDENEYLLDLTSSLNPVLRIGDAELPVSTNILIKQGVTYELEGIV VYAPATGKVYIPSEVLSLVNGKK >Mature_583_residues MDTKETNVLLTLLVGLLLLGNAGSAAAVEDDSNSKDFSGNYTCLTDSLKCKSCPESEAKIKNVIILVPDGCFQSVQTLAR WYSGSPLMLDEMVAGTVSTYSTDSVITDSSSAASAFATGYKTTNGFVSVGPSNASVLSILENPSEDMQYRPLATVLEGSK LEGKATGLVATSRVTHATPAAFASHVDNRDNENEIMEQMVYENVDVVFGGGSRHLVPEEEGGKRTDRENLTEVLLDRGYQ YVDSRDEMLNLSSGKAWGLFASSHMAPDIDRTELVPEEPSLSEMTGKALELLSQDKDGFFLLVEGSQVDWANHANDPVYA VTDFLAFDEAVKVAVEFAEQDGHTLVLAFPDHNTGGMTIGSDSDSNYTSTTIEDVIDPLKSMKLSSAGIAEKIGTDVSSE NIKTQLKTWWGIDATDDEVTEILEIYNNGEGLSLDYAISEVIDQNHTVIGWTTHGHCGEDVPLWAYGPDHPAGHLDNTEI AGYIAEKAGFNLEETNRYLFVEVSEVFSRDNGDGKLDENEYLLDLTSSLNPVLRIGDAELPVSTNILIKQGVTYELEGIV VYAPATGKVYIPSEVLSLVNGKK
Specific function: Unknown
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI94721246, Length=347, Percent_Identity=30.835734870317, Blast_Score=127, Evalue=3e-29, Organism=Homo sapiens, GI157266296, Length=347, Percent_Identity=30.835734870317, Blast_Score=125, Evalue=9e-29, Organism=Homo sapiens, GI157266292, Length=348, Percent_Identity=29.5977011494253, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI116734717, Length=338, Percent_Identity=29.2899408284024, Blast_Score=109, Evalue=8e-24, Organism=Homo sapiens, GI294660772, Length=290, Percent_Identity=29.3103448275862, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI294660770, Length=290, Percent_Identity=29.3103448275862, Blast_Score=101, Evalue=2e-21, Organism=Escherichia coli, GI48994877, Length=404, Percent_Identity=28.7128712871287, Blast_Score=137, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6320689, Length=493, Percent_Identity=33.2657200811359, Blast_Score=196, Evalue=1e-50, Organism=Drosophila melanogaster, GI21355151, Length=331, Percent_Identity=30.8157099697885, Blast_Score=129, Evalue=6e-30, Organism=Drosophila melanogaster, GI19921912, Length=340, Percent_Identity=31.1764705882353, Blast_Score=125, Evalue=1e-28, Organism=Drosophila melanogaster, GI85725200, Length=342, Percent_Identity=27.7777777777778, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI85815833, Length=342, Percent_Identity=27.7777777777778, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI21355981, Length=331, Percent_Identity=29.0030211480363, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI21358067, Length=458, Percent_Identity=26.8558951965066, Blast_Score=116, Evalue=4e-26, Organism=Drosophila melanogaster, GI24651554, Length=350, Percent_Identity=28.8571428571429, Blast_Score=115, Evalue=6e-26, Organism=Drosophila melanogaster, GI18859923, Length=318, Percent_Identity=29.874213836478, Blast_Score=112, Evalue=8e-25, Organism=Drosophila melanogaster, GI21355149, Length=342, Percent_Identity=29.8245614035088, Blast_Score=110, Evalue=3e-24, Organism=Drosophila melanogaster, GI24585213, Length=355, Percent_Identity=29.5774647887324, Blast_Score=110, Evalue=3e-24, Organism=Drosophila melanogaster, GI24657835, Length=340, Percent_Identity=29.1176470588235, Blast_Score=105, Evalue=8e-23, Organism=Drosophila melanogaster, GI24651556, Length=301, Percent_Identity=29.5681063122924, Blast_Score=105, Evalue=8e-23, Organism=Drosophila melanogaster, GI24657827, Length=342, Percent_Identity=28.0701754385965, Blast_Score=103, Evalue=3e-22, Organism=Drosophila melanogaster, GI24657842, Length=340, Percent_Identity=28.5294117647059, Blast_Score=99, Evalue=5e-21,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 63057; Mature: 63057
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTKETNVLLTLLVGLLLLGNAGSAAAVEDDSNSKDFSGNYTCLTDSLKCKSCPESEAKI CCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC KNVIILVPDGCFQSVQTLARWYSGSPLMLDEMVAGTVSTYSTDSVITDSSSAASAFATGY CEEEEEECCHHHHHHHHHHHHHCCCCEEHHHHHHCCCCCCCCCCEEECCCCHHHHHHCCC KTTNGFVSVGPSNASVLSILENPSEDMQYRPLATVLEGSKLEGKATGLVATSRVTHATPA CCCCCEEEECCCCCEEHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEECCCCCCCHH AFASHVDNRDNENEIMEQMVYENVDVVFGGGSRHLVPEEEGGKRTDRENLTEVLLDRGYQ HHHHHCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCH YVDSRDEMLNLSSGKAWGLFASSHMAPDIDRTELVPEEPSLSEMTGKALELLSQDKDGFF HHCCHHHEEECCCCCEEEEEECCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCEE LLVEGSQVDWANHANDPVYAVTDFLAFDEAVKVAVEFAEQDGHTLVLAFPDHNTGGMTIG EEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEC SDSDSNYTSTTIEDVIDPLKSMKLSSAGIAEKIGTDVSSENIKTQLKTWWGIDATDDEVT CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHEECCCCCHHHHH EILEIYNNGEGLSLDYAISEVIDQNHTVIGWTTHGHCGEDVPLWAYGPDHPAGHLDNTEI HHHHHHCCCCCCEEHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCHH AGYIAEKAGFNLEETNRYLFVEVSEVFSRDNGDGKLDENEYLLDLTSSLNPVLRIGDAEL HHEEHHHCCCCHHHCCCEEEEEEHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCC PVSTNILIKQGVTYELEGIVVYAPATGKVYIPSEVLSLVNGKK CCCCCEEEECCCEEEECEEEEEECCCCCEEECHHHHHHHCCCC >Mature Secondary Structure MDTKETNVLLTLLVGLLLLGNAGSAAAVEDDSNSKDFSGNYTCLTDSLKCKSCPESEAKI CCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC KNVIILVPDGCFQSVQTLARWYSGSPLMLDEMVAGTVSTYSTDSVITDSSSAASAFATGY CEEEEEECCHHHHHHHHHHHHHCCCCEEHHHHHHCCCCCCCCCCEEECCCCHHHHHHCCC KTTNGFVSVGPSNASVLSILENPSEDMQYRPLATVLEGSKLEGKATGLVATSRVTHATPA CCCCCEEEECCCCCEEHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEECCCCCCCHH AFASHVDNRDNENEIMEQMVYENVDVVFGGGSRHLVPEEEGGKRTDRENLTEVLLDRGYQ HHHHHCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCH YVDSRDEMLNLSSGKAWGLFASSHMAPDIDRTELVPEEPSLSEMTGKALELLSQDKDGFF HHCCHHHEEECCCCCEEEEEECCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCEE LLVEGSQVDWANHANDPVYAVTDFLAFDEAVKVAVEFAEQDGHTLVLAFPDHNTGGMTIG EEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEC SDSDSNYTSTTIEDVIDPLKSMKLSSAGIAEKIGTDVSSENIKTQLKTWWGIDATDDEVT CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHEECCCCCHHHHH EILEIYNNGEGLSLDYAISEVIDQNHTVIGWTTHGHCGEDVPLWAYGPDHPAGHLDNTEI HHHHHHCCCCCCEEHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCHH AGYIAEKAGFNLEETNRYLFVEVSEVFSRDNGDGKLDENEYLLDLTSSLNPVLRIGDAEL HHEEHHHCCCCHHHCCCEEEEEEHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCC PVSTNILIKQGVTYELEGIVVYAPATGKVYIPSEVLSLVNGKK CCCCCEEEECCCEEEECEEEEEECCCCCEEECHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1898729; 9202461; 9384377; 2113910; 2105301 [H]