Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226635
Identifier: 21226635
GI number: 21226635
Start: 663360
End: 663713
Strand: Reverse
Name: 21226635
Synonym: MM_0533
Alternate gene names: NA
Gene position: 663713-663360 (Counterclockwise)
Preceding gene: 21226636
Following gene: 21226634
Centisome position: 16.2
GC content: 35.03
Gene sequence:
>354_bases TTGACCACAGAAATAATTAACAGTCCTGTTAAAAAATTCAGACGTTATATTGAAATGAATAAGGATCATCAGGCTTATTC AGACTTTAAAGAAGGAATAAATAAAGGTCTGGACATAGCCAGATATACCTTCGAAGAAAACGTAGATAAGTTCTCTTTAT CCTTTTCGGATGAGGCTGGGGTTGTAAAGGCAAAAAACTTACAGGATGAATTTAGCCAGCTTCTGGATGAGATTGTCCTT ACAAAAAAGCCAAATTGCTCTGAAGAGTGTTTAGATGGGATATATATGGGATTTGAAAGGTCTAAAAAAATATTTGAGGA TTTCCTGCAGGAGGCTTTACCAGTTGAGAATTAA
Upstream 100 bases:
>100_bases CCTGAACCCAAAATTCAGGTTCTTTAGCCTGGAGGTGGTTGAAAAACACCTGGAGCCCATTCTCCTGGCGAAGGTCACTT AAAAAAGGAAGTGAAGGATT
Downstream 100 bases:
>100_bases AGAAAATCCTCTTAATTTATTATAATTAATCGAGCTTTAAATCTCCATTCTTAAAGATTCTATTCTTAAACATCCGGTTT TTAACCCTCATTTCTCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MTTEIINSPVKKFRRYIEMNKDHQAYSDFKEGINKGLDIARYTFEENVDKFSLSFSDEAGVVKAKNLQDEFSQLLDEIVL TKKPNCSEECLDGIYMGFERSKKIFEDFLQEALPVEN
Sequences:
>Translated_117_residues MTTEIINSPVKKFRRYIEMNKDHQAYSDFKEGINKGLDIARYTFEENVDKFSLSFSDEAGVVKAKNLQDEFSQLLDEIVL TKKPNCSEECLDGIYMGFERSKKIFEDFLQEALPVEN >Mature_116_residues TTEIINSPVKKFRRYIEMNKDHQAYSDFKEGINKGLDIARYTFEENVDKFSLSFSDEAGVVKAKNLQDEFSQLLDEIVLT KKPNCSEECLDGIYMGFERSKKIFEDFLQEALPVEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13601; Mature: 13470
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEIINSPVKKFRRYIEMNKDHQAYSDFKEGINKGLDIARYTFEENVDKFSLSFSDEAG CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHCHHHHCCCCCCCCC VVKAKNLQDEFSQLLDEIVLTKKPNCSEECLDGIYMGFERSKKIFEDFLQEALPVEN CHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TTEIINSPVKKFRRYIEMNKDHQAYSDFKEGINKGLDIARYTFEENVDKFSLSFSDEAG CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHCHHHHCCCCCCCCC VVKAKNLQDEFSQLLDEIVLTKKPNCSEECLDGIYMGFERSKKIFEDFLQEALPVEN CHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA