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The map label for this gene is nodV [H]

Identifier: 21226620

GI number: 21226620

Start: 644144

End: 646849

Strand: Reverse

Name: nodV [H]

Synonym: MM_0518

Alternate gene names: 21226620

Gene position: 646849-644144 (Counterclockwise)

Preceding gene: 21226621

Following gene: 21226619

Centisome position: 15.79

GC content: 39.36

Gene sequence:

>2706_bases
ATGAAAACAGACCTGGAGCAATTTCCGGCAAAGAATCCGAATCCTGTGCTGAGTGTGGCAAATAATTGTACTGTTCTTTA
CTCAAACAAAGCAGGTGAGCCCTTATTACACGAATGGGGTGTGGTGGTAGGGGAAAAATTGCCGTCCTATTTAAGAGACC
TCGTGAAGAGTGTAATTACTTTAAATAGACCTGAAAAAATGGAATTAAAAATAGAGAAAAAAGTATACCTGGTCGCGTTT
CATCCTTCATCTGAAGAAAAATGCGTAAACATTTATGGGTTCGACATAACTGACCAGAAAGAGCTTGAAGAAAGGCTCCG
TATCAAGGAAAAGCAGAACGACATTCTCTACAGAATAGGAAAAGTCGCTCTTGAATTCGAAAGCCTGCAAATCTTTCTGG
ATGAGAGCGTAAAGCTGATTGCAAATATACTTGAAGTAGAATATTGTAAAATTTTGGAACTTATGCCCGACGGAAACTTC
CTGTTAAGGGCTGGGTCTGGATGGAAACATGGGCTTGTAGGGAAAGCTATTATTGGGGGAGAAAAGGAGTCACAGGCGGG
ATATACCTTATTTTCAGGTATGCCTGTGGTTGTGGAAGATTTTGCAGGAGAAAGCCGCTTTAAGAAACCTGAAATACTGA
GAATGCACGAGGTTAATAGCGGAGTAAGTGTTACAATCGGCAGTATCGGGAAAATATTCGGAGTACTTGGTGTCCATTCC
AGGAAAAAAAGGAAGTTTACTTCAGATGATACCTATTTTCTCAGTTCGGTAGCTTTTTTAATTGCACAGGTAATCGAACG
CAAAAAAGCAGAAGAAGCCCTGAAAGAGGCACACGACAGTTTAGAAGAAACAGTTACAGAACGTACATCAGAGCTTGAGA
AATCTTATATTTCGTTAAAGGAAAGTGAAAGTAGGCTTGCTGAAGCTCAAAGAATGGCTCATATTGGAAGCTGGGACTGG
AATCTTATAACTGGTGAAGTATGCTGGTCTGACGAGCTATATCACATTTTTGGACGTTCCCCTCAAGAATCGGGCGCAAC
TTATGACGAGTTCCTGAGTTATGTGCATCCAGATGACAGGGACCGTGTAGATAATGCCCTAAAAAAGGGTTTAAATGGAG
AATCTGTTGCAGGTAACTACAGGATAATTTTAGGTGACGGAGAAGAGCGCATAGTCCGTACAGAGGCTGAAGTTGTTTTT
GATGAGAAAAATAACCCTGTTCAGGTGAAAGGAACGGTTCAGGATATCACTGAGATAAAAAAAGTAGAAGAACAGCTCAA
GATCCTGGCAAATATTGTGGAATCATCAAACGATGCTATTGGAACTATATCCCTGGATGGCAACATTACAGGCTGGAATC
AAGAAGCTGAGAATGTTTATGGTTATTCGGTGGGAGAGGTTCTGGGAAAGCCTGTATCTATCGTTACTCCACCTCATTTA
GATAAAGAAACCATAAAACTAATTGAAGAGATAATGCATGGGAAAAAGGTCCAGCATTATGAGACCTTAAGGTTAAGGAA
GGACGGTACGACAATATACGTCTCGATAACTCTTTCTCCTGTTTTTGATTCCTATGGAAAGCTGATTGCTATCTCTTTCA
TTTCCAGAGATATAACAGAAAGAAAAAAAATAGAAGAAAAACTTCGTGAAAGCGAAGAGAAGTACCGCAACATCGTGGAG
ACTGCAAATGAAGGCATAAGCATAGTTGATGCTGAAGAAAGAATTACTTTCGTCAATAAGAAGATTGAAGATATGTTTGG
TTACAGTTCGGAAGAACTCATTGGCGGATCGATGTGGGATCTTCTCAGTGATGAAAGTAAGACTATTATCAAACAGATGT
TAGAAAAAGGTTGGAAAAATGTCAATGAGAGCTTTGAAATTAAATTTATACATAAAGACGGCTATCCAGTTTGGACATAT
ACAAACTCCAAATCTCTTTTTGATAAGGATGGTAAGTTTTTTGGAACTATGAACCTTCATACTGACATTACAAAACGAAA
AGAAGCCGAAGAAGCCCTCAGGAATTTCGAAATTGCCCGTAAAAAGGAAATCCATCACAGGATAAAGAATAATCTTCAGG
TAATCTGCTCCCTTCTGGACCTTCAGGCTGAAAAGTTCAGAAGCAGAGAATCTGCTGAGGATACGGAAGTCCTTAACGCT
TTCATAGAAAGTCAGAACAGAGTAATGTCAATCGCTCTTATCCATGAAGAGCTGCACGAAGGCAGGGGAACGGATACATT
AAACTTCTCGCCTTACCTCGAAAAACTTGTTGAAAATCTTTTCCAGACTTATATACTTGAAAATGTCAATACGAGCCTGG
ACATCAAGCTGGAAGAAAACATTTTCTTCGATATGGATACTGCTATCCCATTGGGAATTATCGTTAACGAACTTGTTTCC
AACTCCCTGAAGTACGCATTTTCAGGTAGAGATTATGGGGAAATTCAAATCAAACTTTACAGGGAAGACTCTGCAGAACA
CGAAAACAAAGAGCAGAGAGTCATAAAAGAAAGTTATGGTGGCACTAATGTTATTTTAATAGTTTCGGACAATGGAATTG
GTATTCCTGAGGACTTTAATCTGGAAGATTCCAGCTCTCTTGGCTTACAGTTAGTAAAAATCCTGGTTGACCAGTTAGAA
GGCCAGATTGAGTTAAATAGAGATTCCGGAACTGAATTTACTATAAGATTTACAGTACAAATATAA

Upstream 100 bases:

>100_bases
ATTTTTATAGATTAACTTTTATATTCTCGCGTGTGAGTGGTCGCAACAATAAGATAAAGTCAGGTATACTGCCGTCAAAG
ATAGGAGTCTGATGGGAATT

Downstream 100 bases:

>100_bases
ATTATATATATAAAGTAAAATCGAATTCTTGTACGATAATTGCGGCTCCCGACTAATTCAGGACAAACTGTAACTCAATG
GTCTATCGAAAATTAGCTAG

Product: sensory transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 901; Mature: 901

Protein sequence:

>901_residues
MKTDLEQFPAKNPNPVLSVANNCTVLYSNKAGEPLLHEWGVVVGEKLPSYLRDLVKSVITLNRPEKMELKIEKKVYLVAF
HPSSEEKCVNIYGFDITDQKELEERLRIKEKQNDILYRIGKVALEFESLQIFLDESVKLIANILEVEYCKILELMPDGNF
LLRAGSGWKHGLVGKAIIGGEKESQAGYTLFSGMPVVVEDFAGESRFKKPEILRMHEVNSGVSVTIGSIGKIFGVLGVHS
RKKRKFTSDDTYFLSSVAFLIAQVIERKKAEEALKEAHDSLEETVTERTSELEKSYISLKESESRLAEAQRMAHIGSWDW
NLITGEVCWSDELYHIFGRSPQESGATYDEFLSYVHPDDRDRVDNALKKGLNGESVAGNYRIILGDGEERIVRTEAEVVF
DEKNNPVQVKGTVQDITEIKKVEEQLKILANIVESSNDAIGTISLDGNITGWNQEAENVYGYSVGEVLGKPVSIVTPPHL
DKETIKLIEEIMHGKKVQHYETLRLRKDGTTIYVSITLSPVFDSYGKLIAISFISRDITERKKIEEKLRESEEKYRNIVE
TANEGISIVDAEERITFVNKKIEDMFGYSSEELIGGSMWDLLSDESKTIIKQMLEKGWKNVNESFEIKFIHKDGYPVWTY
TNSKSLFDKDGKFFGTMNLHTDITKRKEAEEALRNFEIARKKEIHHRIKNNLQVICSLLDLQAEKFRSRESAEDTEVLNA
FIESQNRVMSIALIHEELHEGRGTDTLNFSPYLEKLVENLFQTYILENVNTSLDIKLEENIFFDMDTAIPLGIIVNELVS
NSLKYAFSGRDYGEIQIKLYREDSAEHENKEQRVIKESYGGTNVILIVSDNGIGIPEDFNLEDSSSLGLQLVKILVDQLE
GQIELNRDSGTEFTIRFTVQI

Sequences:

>Translated_901_residues
MKTDLEQFPAKNPNPVLSVANNCTVLYSNKAGEPLLHEWGVVVGEKLPSYLRDLVKSVITLNRPEKMELKIEKKVYLVAF
HPSSEEKCVNIYGFDITDQKELEERLRIKEKQNDILYRIGKVALEFESLQIFLDESVKLIANILEVEYCKILELMPDGNF
LLRAGSGWKHGLVGKAIIGGEKESQAGYTLFSGMPVVVEDFAGESRFKKPEILRMHEVNSGVSVTIGSIGKIFGVLGVHS
RKKRKFTSDDTYFLSSVAFLIAQVIERKKAEEALKEAHDSLEETVTERTSELEKSYISLKESESRLAEAQRMAHIGSWDW
NLITGEVCWSDELYHIFGRSPQESGATYDEFLSYVHPDDRDRVDNALKKGLNGESVAGNYRIILGDGEERIVRTEAEVVF
DEKNNPVQVKGTVQDITEIKKVEEQLKILANIVESSNDAIGTISLDGNITGWNQEAENVYGYSVGEVLGKPVSIVTPPHL
DKETIKLIEEIMHGKKVQHYETLRLRKDGTTIYVSITLSPVFDSYGKLIAISFISRDITERKKIEEKLRESEEKYRNIVE
TANEGISIVDAEERITFVNKKIEDMFGYSSEELIGGSMWDLLSDESKTIIKQMLEKGWKNVNESFEIKFIHKDGYPVWTY
TNSKSLFDKDGKFFGTMNLHTDITKRKEAEEALRNFEIARKKEIHHRIKNNLQVICSLLDLQAEKFRSRESAEDTEVLNA
FIESQNRVMSIALIHEELHEGRGTDTLNFSPYLEKLVENLFQTYILENVNTSLDIKLEENIFFDMDTAIPLGIIVNELVS
NSLKYAFSGRDYGEIQIKLYREDSAEHENKEQRVIKESYGGTNVILIVSDNGIGIPEDFNLEDSSSLGLQLVKILVDQLE
GQIELNRDSGTEFTIRFTVQI
>Mature_901_residues
MKTDLEQFPAKNPNPVLSVANNCTVLYSNKAGEPLLHEWGVVVGEKLPSYLRDLVKSVITLNRPEKMELKIEKKVYLVAF
HPSSEEKCVNIYGFDITDQKELEERLRIKEKQNDILYRIGKVALEFESLQIFLDESVKLIANILEVEYCKILELMPDGNF
LLRAGSGWKHGLVGKAIIGGEKESQAGYTLFSGMPVVVEDFAGESRFKKPEILRMHEVNSGVSVTIGSIGKIFGVLGVHS
RKKRKFTSDDTYFLSSVAFLIAQVIERKKAEEALKEAHDSLEETVTERTSELEKSYISLKESESRLAEAQRMAHIGSWDW
NLITGEVCWSDELYHIFGRSPQESGATYDEFLSYVHPDDRDRVDNALKKGLNGESVAGNYRIILGDGEERIVRTEAEVVF
DEKNNPVQVKGTVQDITEIKKVEEQLKILANIVESSNDAIGTISLDGNITGWNQEAENVYGYSVGEVLGKPVSIVTPPHL
DKETIKLIEEIMHGKKVQHYETLRLRKDGTTIYVSITLSPVFDSYGKLIAISFISRDITERKKIEEKLRESEEKYRNIVE
TANEGISIVDAEERITFVNKKIEDMFGYSSEELIGGSMWDLLSDESKTIIKQMLEKGWKNVNESFEIKFIHKDGYPVWTY
TNSKSLFDKDGKFFGTMNLHTDITKRKEAEEALRNFEIARKKEIHHRIKNNLQVICSLLDLQAEKFRSRESAEDTEVLNA
FIESQNRVMSIALIHEELHEGRGTDTLNFSPYLEKLVENLFQTYILENVNTSLDIKLEENIFFDMDTAIPLGIIVNELVS
NSLKYAFSGRDYGEIQIKLYREDSAEHENKEQRVIKESYGGTNVILIVSDNGIGIPEDFNLEDSSSLGLQLVKILVDQLE
GQIELNRDSGTEFTIRFTVQI

Specific function: Member of the two-component regulatory system nodV/nodW probably involved in the regulation of the transcription of genes involved in the nodulation process. NodV may function as a membrane-associated protein kinase that phosphorylates nodW in response to

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 PAS (PER-ARNT-SIM) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 102435; Mature: 102435

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTDLEQFPAKNPNPVLSVANNCTVLYSNKAGEPLLHEWGVVVGEKLPSYLRDLVKSVIT
CCCCCHHCCCCCCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LNRPEKMELKIEKKVYLVAFHPSSEEKCVNIYGFDITDQKELEERLRIKEKQNDILYRIG
CCCCCCEEEEEEEEEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHH
KVALEFESLQIFLDESVKLIANILEVEYCKILELMPDGNFLLRAGSGWKHGLVGKAIIGG
HHHEEHHHHHEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEECC
EKESQAGYTLFSGMPVVVEDFAGESRFKKPEILRMHEVNSGVSVTIGSIGKIFGVLGVHS
CCCCCCCEEEECCCCHHHHHCCCCCCCCCCCCEEEEECCCCCEEEECHHHHHHHHHCCCC
RKKRKFTSDDTYFLSSVAFLIAQVIERKKAEEALKEAHDSLEETVTERTSELEKSYISLK
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESESRLAEAQRMAHIGSWDWNLITGEVCWSDELYHIFGRSPQESGATYDEFLSYVHPDDR
HHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHCCCCCCCCCCCHHHHHHHCCCCCH
DRVDNALKKGLNGESVAGNYRIILGDGEERIVRTEAEVVFDEKNNPVQVKGTVQDITEIK
HHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEECCCCCEEEEECHHHHHHHH
KVEEQLKILANIVESSNDAIGTISLDGNITGWNQEAENVYGYSVGEVLGKPVSIVTPPHL
HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEHHHHHCCCEEEECCCCC
DKETIKLIEEIMHGKKVQHYETLRLRKDGTTIYVSITLSPVFDSYGKLIAISFISRDITE
CHHHHHHHHHHHCCCCCCHHHHEEEEECCCEEEEEEEEEHHHHCCCCEEEEHHHHHHHHH
RKKIEEKLRESEEKYRNIVETANEGISIVDAEERITFVNKKIEDMFGYSSEELIGGSMWD
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHCCCHHHH
LLSDESKTIIKQMLEKGWKNVNESFEIKFIHKDGYPVWTYTNSKSLFDKDGKFFGTMNLH
HHCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCEEEEEECC
TDITKRKEAEEALRNFEIARKKEIHHRIKNNLQVICSLLDLQAEKFRSRESAEDTEVLNA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
FIESQNRVMSIALIHEELHEGRGTDTLNFSPYLEKLVENLFQTYILENVNTSLDIKLEEN
HHHCCCCEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
IFFDMDTAIPLGIIVNELVSNSLKYAFSGRDYGEIQIKLYREDSAEHENKEQRVIKESYG
EEEECCCCCHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEECCCCCCCCHHHHHHHHCCC
GTNVILIVSDNGIGIPEDFNLEDSSSLGLQLVKILVDQLEGQIELNRDSGTEFTIRFTVQ
CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEE
I
C
>Mature Secondary Structure
MKTDLEQFPAKNPNPVLSVANNCTVLYSNKAGEPLLHEWGVVVGEKLPSYLRDLVKSVIT
CCCCCHHCCCCCCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LNRPEKMELKIEKKVYLVAFHPSSEEKCVNIYGFDITDQKELEERLRIKEKQNDILYRIG
CCCCCCEEEEEEEEEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHH
KVALEFESLQIFLDESVKLIANILEVEYCKILELMPDGNFLLRAGSGWKHGLVGKAIIGG
HHHEEHHHHHEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEECC
EKESQAGYTLFSGMPVVVEDFAGESRFKKPEILRMHEVNSGVSVTIGSIGKIFGVLGVHS
CCCCCCCEEEECCCCHHHHHCCCCCCCCCCCCEEEEECCCCCEEEECHHHHHHHHHCCCC
RKKRKFTSDDTYFLSSVAFLIAQVIERKKAEEALKEAHDSLEETVTERTSELEKSYISLK
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESESRLAEAQRMAHIGSWDWNLITGEVCWSDELYHIFGRSPQESGATYDEFLSYVHPDDR
HHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHCCCCCCCCCCCHHHHHHHCCCCCH
DRVDNALKKGLNGESVAGNYRIILGDGEERIVRTEAEVVFDEKNNPVQVKGTVQDITEIK
HHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEECCCCCEEEEECHHHHHHHH
KVEEQLKILANIVESSNDAIGTISLDGNITGWNQEAENVYGYSVGEVLGKPVSIVTPPHL
HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEHHHHHCCCEEEECCCCC
DKETIKLIEEIMHGKKVQHYETLRLRKDGTTIYVSITLSPVFDSYGKLIAISFISRDITE
CHHHHHHHHHHHCCCCCCHHHHEEEEECCCEEEEEEEEEHHHHCCCCEEEEHHHHHHHHH
RKKIEEKLRESEEKYRNIVETANEGISIVDAEERITFVNKKIEDMFGYSSEELIGGSMWD
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHCCCHHHH
LLSDESKTIIKQMLEKGWKNVNESFEIKFIHKDGYPVWTYTNSKSLFDKDGKFFGTMNLH
HHCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCEEEEEECC
TDITKRKEAEEALRNFEIARKKEIHHRIKNNLQVICSLLDLQAEKFRSRESAEDTEVLNA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
FIESQNRVMSIALIHEELHEGRGTDTLNFSPYLEKLVENLFQTYILENVNTSLDIKLEEN
HHHCCCCEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
IFFDMDTAIPLGIIVNELVSNSLKYAFSGRDYGEIQIKLYREDSAEHENKEQRVIKESYG
EEEECCCCCHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEECCCCCCCCHHHHHHHHCCC
GTNVILIVSDNGIGIPEDFNLEDSSSLGLQLVKILVDQLEGQIELNRDSGTEFTIRFTVQ
CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEE
I
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2320582; 11157954; 12597275 [H]