| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226603
Identifier: 21226603
GI number: 21226603
Start: 623181
End: 623654
Strand: Direct
Name: 21226603
Synonym: MM_0501
Alternate gene names: NA
Gene position: 623181-623654 (Clockwise)
Preceding gene: 21226602
Following gene: 21226604
Centisome position: 15.21
GC content: 43.46
Gene sequence:
>474_bases ATGCAAAAAATCACCCCATTTTTATGGTTCGACAGCCAGGCTGAGGAAGCGGTTAACTTCTATATTTCCATTTTTAAGAA TTCAAAAATATTAAGCACTGTGCGCTATGGAGAAGCAGGGCCCGGGCCGAAAGGAGCTGTGATGTCCATGACATTCCAGC TTGAAGGACAGGAATTCATTGCGTTAAACGGCGGCCCAGAATTTACTTTCTCACCAGCCATATCGTTTTTTGTCAACTGC GAGACTCAGGAAGAAATAGATGAGTTGTGGGAGAAACTCTCTCTGGACGGAGAAAAACAGGGTCCTGCATGGGTTAAAGA TAGATACGGCATTTCGTGGCAAATAGTTCCCACTGTTCTGGGAGAACTGTTGAGTGACCCTGATACTGAAAAATCCAGAA GAGTTATGGAAGCAATGCTTCAGATGGATAAAATTGACATAGAAAAGCTAAAGCAGGCACATAAGGGACAATGA
Upstream 100 bases:
>100_bases ATTCTTATGAACGTCTTGATGAGTTGCTGGAAAAAATGAAAAAATAAAACTTCCATTGAAAGAAAAAACTGTTTAAAATA ATAAGTCCGGAGAAAAATAC
Downstream 100 bases:
>100_bases ACCGGACGTTTGTGGATATTGTCCAGCAGCTTTCTTAAAGGACATTTCTGCAAAACAGCAAACCGTTTGTTATTTTCTCT GTAAGGTAAAACATATGTAA
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: 3-Demethylubiquinone-9 3-Methyltransferase Family Protein; 3-Demethylubiquinone-9 3-Methyltransferase Domain Protein; 3-Demethylubiquinone-9 3-O-Methyltransferase; Methyltransferase; PhnB Protein; Signal Peptide; 3-Demethylubiquinone-9 3-Methyltransferase Family; 3-Demethylubiquinone-93- Methyltransferase Protein
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MQKITPFLWFDSQAEEAVNFYISIFKNSKILSTVRYGEAGPGPKGAVMSMTFQLEGQEFIALNGGPEFTFSPAISFFVNC ETQEEIDELWEKLSLDGEKQGPAWVKDRYGISWQIVPTVLGELLSDPDTEKSRRVMEAMLQMDKIDIEKLKQAHKGQ
Sequences:
>Translated_157_residues MQKITPFLWFDSQAEEAVNFYISIFKNSKILSTVRYGEAGPGPKGAVMSMTFQLEGQEFIALNGGPEFTFSPAISFFVNC ETQEEIDELWEKLSLDGEKQGPAWVKDRYGISWQIVPTVLGELLSDPDTEKSRRVMEAMLQMDKIDIEKLKQAHKGQ >Mature_157_residues MQKITPFLWFDSQAEEAVNFYISIFKNSKILSTVRYGEAGPGPKGAVMSMTFQLEGQEFIALNGGPEFTFSPAISFFVNC ETQEEIDELWEKLSLDGEKQGPAWVKDRYGISWQIVPTVLGELLSDPDTEKSRRVMEAMLQMDKIDIEKLKQAHKGQ
Specific function: Unknown
COG id: COG3865
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17801; Mature: 17801
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKITPFLWFDSQAEEAVNFYISIFKNSKILSTVRYGEAGPGPKGAVMSMTFQLEGQEFI CCCCCCEEEECCHHHHHHHHHHHHHCCCHHHHHEECCCCCCCCCCCEEEEEEEECCCEEE ALNGGPEFTFSPAISFFVNCETQEEIDELWEKLSLDGEKQGPAWVKDRYGISWQIVPTVL EECCCCCEEECCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHCCCCEEEEHHHHH GELLSDPDTEKSRRVMEAMLQMDKIDIEKLKQAHKGQ HHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCC >Mature Secondary Structure MQKITPFLWFDSQAEEAVNFYISIFKNSKILSTVRYGEAGPGPKGAVMSMTFQLEGQEFI CCCCCCEEEECCHHHHHHHHHHHHHCCCHHHHHEECCCCCCCCCCCEEEEEEEECCCEEE ALNGGPEFTFSPAISFFVNCETQEEIDELWEKLSLDGEKQGPAWVKDRYGISWQIVPTVL EECCCCCEEECCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHCCCCEEEEHHHHH GELLSDPDTEKSRRVMEAMLQMDKIDIEKLKQAHKGQ HHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA