Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226603

Identifier: 21226603

GI number: 21226603

Start: 623181

End: 623654

Strand: Direct

Name: 21226603

Synonym: MM_0501

Alternate gene names: NA

Gene position: 623181-623654 (Clockwise)

Preceding gene: 21226602

Following gene: 21226604

Centisome position: 15.21

GC content: 43.46

Gene sequence:

>474_bases
ATGCAAAAAATCACCCCATTTTTATGGTTCGACAGCCAGGCTGAGGAAGCGGTTAACTTCTATATTTCCATTTTTAAGAA
TTCAAAAATATTAAGCACTGTGCGCTATGGAGAAGCAGGGCCCGGGCCGAAAGGAGCTGTGATGTCCATGACATTCCAGC
TTGAAGGACAGGAATTCATTGCGTTAAACGGCGGCCCAGAATTTACTTTCTCACCAGCCATATCGTTTTTTGTCAACTGC
GAGACTCAGGAAGAAATAGATGAGTTGTGGGAGAAACTCTCTCTGGACGGAGAAAAACAGGGTCCTGCATGGGTTAAAGA
TAGATACGGCATTTCGTGGCAAATAGTTCCCACTGTTCTGGGAGAACTGTTGAGTGACCCTGATACTGAAAAATCCAGAA
GAGTTATGGAAGCAATGCTTCAGATGGATAAAATTGACATAGAAAAGCTAAAGCAGGCACATAAGGGACAATGA

Upstream 100 bases:

>100_bases
ATTCTTATGAACGTCTTGATGAGTTGCTGGAAAAAATGAAAAAATAAAACTTCCATTGAAAGAAAAAACTGTTTAAAATA
ATAAGTCCGGAGAAAAATAC

Downstream 100 bases:

>100_bases
ACCGGACGTTTGTGGATATTGTCCAGCAGCTTTCTTAAAGGACATTTCTGCAAAACAGCAAACCGTTTGTTATTTTCTCT
GTAAGGTAAAACATATGTAA

Product: 3-demethylubiquinone-9 3-methyltransferase

Products: NA

Alternate protein names: 3-Demethylubiquinone-9 3-Methyltransferase Family Protein; 3-Demethylubiquinone-9 3-Methyltransferase Domain Protein; 3-Demethylubiquinone-9 3-O-Methyltransferase; Methyltransferase; PhnB Protein; Signal Peptide; 3-Demethylubiquinone-9 3-Methyltransferase Family; 3-Demethylubiquinone-93- Methyltransferase Protein

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MQKITPFLWFDSQAEEAVNFYISIFKNSKILSTVRYGEAGPGPKGAVMSMTFQLEGQEFIALNGGPEFTFSPAISFFVNC
ETQEEIDELWEKLSLDGEKQGPAWVKDRYGISWQIVPTVLGELLSDPDTEKSRRVMEAMLQMDKIDIEKLKQAHKGQ

Sequences:

>Translated_157_residues
MQKITPFLWFDSQAEEAVNFYISIFKNSKILSTVRYGEAGPGPKGAVMSMTFQLEGQEFIALNGGPEFTFSPAISFFVNC
ETQEEIDELWEKLSLDGEKQGPAWVKDRYGISWQIVPTVLGELLSDPDTEKSRRVMEAMLQMDKIDIEKLKQAHKGQ
>Mature_157_residues
MQKITPFLWFDSQAEEAVNFYISIFKNSKILSTVRYGEAGPGPKGAVMSMTFQLEGQEFIALNGGPEFTFSPAISFFVNC
ETQEEIDELWEKLSLDGEKQGPAWVKDRYGISWQIVPTVLGELLSDPDTEKSRRVMEAMLQMDKIDIEKLKQAHKGQ

Specific function: Unknown

COG id: COG3865

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17801; Mature: 17801

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKITPFLWFDSQAEEAVNFYISIFKNSKILSTVRYGEAGPGPKGAVMSMTFQLEGQEFI
CCCCCCEEEECCHHHHHHHHHHHHHCCCHHHHHEECCCCCCCCCCCEEEEEEEECCCEEE
ALNGGPEFTFSPAISFFVNCETQEEIDELWEKLSLDGEKQGPAWVKDRYGISWQIVPTVL
EECCCCCEEECCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHCCCCEEEEHHHHH
GELLSDPDTEKSRRVMEAMLQMDKIDIEKLKQAHKGQ
HHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCC
>Mature Secondary Structure
MQKITPFLWFDSQAEEAVNFYISIFKNSKILSTVRYGEAGPGPKGAVMSMTFQLEGQEFI
CCCCCCEEEECCHHHHHHHHHHHHHCCCHHHHHEECCCCCCCCCCCEEEEEEEECCCEEE
ALNGGPEFTFSPAISFFVNCETQEEIDELWEKLSLDGEKQGPAWVKDRYGISWQIVPTVL
EECCCCCEEECCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHCCCCEEEEHHHHH
GELLSDPDTEKSRRVMEAMLQMDKIDIEKLKQAHKGQ
HHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA