Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226579

Identifier: 21226579

GI number: 21226579

Start: 602033

End: 602521

Strand: Reverse

Name: 21226579

Synonym: MM_0477

Alternate gene names: NA

Gene position: 602521-602033 (Counterclockwise)

Preceding gene: 21226581

Following gene: 21226578

Centisome position: 14.71

GC content: 43.56

Gene sequence:

>489_bases
ATGGTAAAGAAATTTTCAGCCTTAAAGGGCTCAGATGAAAAGGGTCTCGCTCCTGTTATCGGGACGGCAGTTACAATAGT
CATCGTGTTTATTCTTGCAGGACTGGTTTCTTCAGTCTTTTTTGAGGAGTACGGCAATCCATCCAATAAGATATCACCAA
CAGCAAAACTGCAGATCTATTTTACCGGGGACGAGAGTTCCCTTGAGTTCAAACATGAAGGCGGAGATCAGCTTTTTTTC
GACAGTCCTTCTATATCGGTTATTATGGACATTAACGGCAGCTCGTATCCGCTAAATGACTCCGAACTGGGAGCTCTCGA
AACCGGAGAAAAAGGAGTTCTTGCGTTGAATAAAAGCGAATTGCTGCCTTCAATGGAGCTGAAGCCGGGAGAATGGGTTT
CGGTAAAGGTAGTTGATTATGATAGTGGCGGCATTATCGCAGAAAATGATCTTGAAGTTAAAAGACAGATGCTTATAGAG
CCGGAATGA

Upstream 100 bases:

>100_bases
TATCTGACCGGAATATTCTGGAATATCCTTATATATCTGGAAATTTAAACTTTACTGTCTTAATATTAATTATATGACTT
TTCTCTTCCCGGGGGATATG

Downstream 100 bases:

>100_bases
GCCCGGATCAAAACAGATCTTATGAGCCATTATCTGCGTGCCAGCAACCCCCAGATCCTTCTCTCTTGTTTTTTTCGATA
ACAAGCTTAATTATCTTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MVKKFSALKGSDEKGLAPVIGTAVTIVIVFILAGLVSSVFFEEYGNPSNKISPTAKLQIYFTGDESSLEFKHEGGDQLFF
DSPSISVIMDINGSSYPLNDSELGALETGEKGVLALNKSELLPSMELKPGEWVSVKVVDYDSGGIIAENDLEVKRQMLIE
PE

Sequences:

>Translated_162_residues
MVKKFSALKGSDEKGLAPVIGTAVTIVIVFILAGLVSSVFFEEYGNPSNKISPTAKLQIYFTGDESSLEFKHEGGDQLFF
DSPSISVIMDINGSSYPLNDSELGALETGEKGVLALNKSELLPSMELKPGEWVSVKVVDYDSGGIIAENDLEVKRQMLIE
PE
>Mature_162_residues
MVKKFSALKGSDEKGLAPVIGTAVTIVIVFILAGLVSSVFFEEYGNPSNKISPTAKLQIYFTGDESSLEFKHEGGDQLFF
DSPSISVIMDINGSSYPLNDSELGALETGEKGVLALNKSELLPSMELKPGEWVSVKVVDYDSGGIIAENDLEVKRQMLIE
PE

Specific function: Unknown

COG id: COG3430

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17505; Mature: 17505

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKKFSALKGSDEKGLAPVIGTAVTIVIVFILAGLVSSVFFEEYGNPSNKISPTAKLQIY
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE
FTGDESSLEFKHEGGDQLFFDSPSISVIMDINGSSYPLNDSELGALETGEKGVLALNKSE
EECCCCCEEEEECCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCEECCCCCEEEECHHH
LLPSMELKPGEWVSVKVVDYDSGGIIAENDLEVKRQMLIEPE
CCCCCCCCCCCEEEEEEEEECCCCEEECCCHHHHHHHCCCCC
>Mature Secondary Structure
MVKKFSALKGSDEKGLAPVIGTAVTIVIVFILAGLVSSVFFEEYGNPSNKISPTAKLQIY
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE
FTGDESSLEFKHEGGDQLFFDSPSISVIMDINGSSYPLNDSELGALETGEKGVLALNKSE
EECCCCCEEEEECCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCEECCCCCEEEECHHH
LLPSMELKPGEWVSVKVVDYDSGGIIAENDLEVKRQMLIEPE
CCCCCCCCCCCEEEEEEEEECCCCEEECCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA