| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226577
Identifier: 21226577
GI number: 21226577
Start: 600355
End: 600864
Strand: Reverse
Name: 21226577
Synonym: MM_0475
Alternate gene names: NA
Gene position: 600864-600355 (Counterclockwise)
Preceding gene: 21226578
Following gene: 21226576
Centisome position: 14.67
GC content: 44.51
Gene sequence:
>510_bases GTGACGGATAAAAATAAAGAATGGAATTTATTTTGGGGTAGTCCGATGAAAGTAAAAGATGTCATGAATCCTGATGTTGT ATTCTGCAAGCCTGAAAATACAGTTCGGGAAGCTGCAAAGATCCTTAAGGAAAACAACATCAGTGGAGCTCCTGTCCTTG AGGACGGAAAGCTTGTAGGGATAGTAAGTGAGGCTGACCTTCTTGAGCTGCTGGTGATCCCGGAAAAAGGAAACCTCTGG CTCCCGAGCCCTTTTGAAATAATAGAGGTGCCCATAAGGGAACTCCTGAGCTGGGAGGAAACCAAAAAGATGCTTTCTGA TGTTGGTTCTACAAAGCTGGAAGAGATGATGACAAAGAGTGTGCACACAATCTCTTCCGAGGCATCCGTTGAAGAAGCCT CAGAACTTATGGTCAGGCACAGGATCAACAGGCTTCCTGTGATTGAAAATGGTTATGTTGTCGGAATTGTCACGCGCGGA GACATTATAGAAGGACTTGCAAAACTTTGA
Upstream 100 bases:
>100_bases ATCCAGAACATGAACCTTATGTTCGGGCTGGTTGAGACCCGCGGTCTCTGGACGCCTGCCACAGCTCCATAAACGCAGAG CAGGCGAGAATATATAACTG
Downstream 100 bases:
>100_bases GTCTAAGGAGAGTTTTCATGAAGCAAATAGAGGGCGGAATTTGTGCAGTAAGGGGCGTATCTGCATACGGGATAAAACCC GGAAAAATGGGGATAGCTGT
Product: putative inosine-5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MTDKNKEWNLFWGSPMKVKDVMNPDVVFCKPENTVREAAKILKENNISGAPVLEDGKLVGIVSEADLLELLVIPEKGNLW LPSPFEIIEVPIRELLSWEETKKMLSDVGSTKLEEMMTKSVHTISSEASVEEASELMVRHRINRLPVIENGYVVGIVTRG DIIEGLAKL
Sequences:
>Translated_169_residues MTDKNKEWNLFWGSPMKVKDVMNPDVVFCKPENTVREAAKILKENNISGAPVLEDGKLVGIVSEADLLELLVIPEKGNLW LPSPFEIIEVPIRELLSWEETKKMLSDVGSTKLEEMMTKSVHTISSEASVEEASELMVRHRINRLPVIENGYVVGIVTRG DIIEGLAKL >Mature_168_residues TDKNKEWNLFWGSPMKVKDVMNPDVVFCKPENTVREAAKILKENNISGAPVLEDGKLVGIVSEADLLELLVIPEKGNLWL PSPFEIIEVPIRELLSWEETKKMLSDVGSTKLEEMMTKSVHTISSEASVEEASELMVRHRINRLPVIENGYVVGIVTRGD IIEGLAKL
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000644 [H]
Pfam domain/function: PF00571 CBS [H]
EC number: NA
Molecular weight: Translated: 18926; Mature: 18795
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDKNKEWNLFWGSPMKVKDVMNPDVVFCKPENTVREAAKILKENNISGAPVLEDGKLVG CCCCCCCEEEEECCCCEEHHCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCEECCCCEEE IVSEADLLELLVIPEKGNLWLPSPFEIIEVPIRELLSWEETKKMLSDVGSTKLEEMMTKS EECCCCEEEEEEECCCCCEECCCCHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHH VHTISSEASVEEASELMVRHRINRLPVIENGYVVGIVTRGDIIEGLAKL HHHHCCCCCHHHHHHHHHHHHHCCCCEECCCEEEEEEECCHHHHHHHCC >Mature Secondary Structure TDKNKEWNLFWGSPMKVKDVMNPDVVFCKPENTVREAAKILKENNISGAPVLEDGKLVG CCCCCCEEEEECCCCEEHHCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCEECCCCEEE IVSEADLLELLVIPEKGNLWLPSPFEIIEVPIRELLSWEETKKMLSDVGSTKLEEMMTKS EECCCCEEEEEEECCCCCEECCCCHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHH VHTISSEASVEEASELMVRHRINRLPVIENGYVVGIVTRGDIIEGLAKL HHHHCCCCCHHHHHHHHHHHHHCCCCEECCCEEEEEEECCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]