| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21226569
Identifier: 21226569
GI number: 21226569
Start: 587979
End: 590585
Strand: Reverse
Name: 21226569
Synonym: MM_0467
Alternate gene names: NA
Gene position: 590585-587979 (Counterclockwise)
Preceding gene: 21226570
Following gene: 21226568
Centisome position: 14.42
GC content: 47.45
Gene sequence:
>2607_bases TTGGGGAATAAAAACTACTTAAAAATTCTATGCCTATTTTTAATGCTCGGATTGCTGTGCGAATCCGCAGCTGCACAGGT TTCGGGCTCATCAGGCAACCGCATATGGGATGCAAATTTAAGCCAGAACCTTACCTATACCTGGACGCCGCAGACATATT CGGGTTTTTACTATGACCTGGATACCGGGGAAGGCTCGGAAAATATGACTATCCAGCTTACAGAAGGCAGTCGGAGTGTC CAGAGAAACGGATTGCAGTATGAGACAAGGCCCATCGAAACAAACTTCGAATATGGGAACTGGGGCTCTTACCAGGTTAT AGGATTTATGGCTGAACGGTATTTTGCTGGATATACTGAAAATTCTAATTTTGTGAATGACGATATAAGCGTAATCTCGG ACGGTCAGCTTTCAAAAATATTGATTGACAGCGATGACAGGAAATCCCTCTACACAGGCTCTTCCCTCATACTTGAAGAA GGCTATTCCCTGAACATCGTGGAAGTCGATGTTAACGGAAACACGGTCTGGGTTCAGCTCGAGAAAGACGGGGATGTGAT AGACAACGGTTTCCTATCTTCCAACAGTAACTATGTCTATGAAACTGATCTCGGGGACGCAGATGATGTACCTCTGATCG CGGTCCATTTAGCTCAGATATTCAGGGGCACGGAGACAAATGCTATATTTGTAGAAGGAATCTTCCAGATATCGGACGAA TATGTCCAGATCGAGAATGGGGACAGGTTCGGGAAAATGGAGATCAGTTCTACTTCGAGTTCCGGAATCATAATGAGAAA CCGTGATTCTTTTACTCTGGGCAGAGGAGATACGGTTGACATTATGGGAAAACTCAGCTTTGTCGTGGCTGACTCCAGCG AGCTTCGCTTTGCTCCCATAGTTGAAATTTCCGAACCAGGAACCTATGAACTGAGGGGAACGGTTCATGACGAGACATTT AATACCACTGTCTGGACGCCTTATAACTTTGAAGGGTTCTATTACAGCATAGATGAGAATGTCTCAACCGAAAGCCTGAC CCTGACAGAAGAGATTAGCGGCAGGTCGATTGATGACGAGGCCCTTGTCTATTCAACCAGCCCTGCACTCGTGAAATTCG AACAGGAAAGCTGGGGTTCCTATCAGGTCATTGGCTTCATGGCAGAGAAGTATTTTGCAGGCTACCCTGCGAATACCTTC GGAAATTCAAGAAGCGTGAGTGTCCTTTCAGATGATATCCTTGCAAAAGTTTTGATTGATGACGATCACAAGAGGTCTAT GTTCACGGGCTCCTCCATAGCTCTTGAAAATGGCTACTCCCTCAAAGCCGCAGAGGTCGATGTAAACGGTAACAGAGTAC TTCTCGAGCTGTACAGGGACGGAGAGCTTGTGGATTCCGGGATAACTTCCAGCAATGGGGACTACATCTACGAAGCGGAT ATCGGCGGGGCGGAAGATGTCCCCATGATCGCAGCCCACATAAGCACAGTCTTCCGTTCACGTGAAACTGACGCTGTGTT TATAGAAGGCATCTTCCAGGTCTCAGATGATTATCTTGAGCTTTCCCAGGGCGACTCCTTCGGCAAGATGGAAATCAGCA CCATATCCAGTTCAGGAATTACAATGAAGAACGAGGATTCAATTTCCCTTTCAAGGGGCAATACGATCAGCCTGATGGGC AATGTAAGCTTCAAGGTAGCTGATTCAAATGTCCTGCGTTTCTATCCATTCGTTGAAGTCAAGAGCGCGCCACAGGACCA GCTCAGGATAGAAACCCCTGATGTCTTTGTGGTCGGAGAGGCTGCAGAAATCTCTGTAACCGCAAGGGATGCTGCAGTCA GTGACGTTGAAATCCGGCTCGGCAACCAGAGCATCGGAACCACAGGGGACGACGGGATCCTTGCCTACACCCCAACCCTG GAGGGCGATTTCACTTTATATGCAAACAAGGCAGGCTACCTCTCCGGAAGTAAGGATGTGGATATTGTCGGAGCCGGAGT CCTGAAACTGCTGCTCTCAGTTTCTCCTGAAAACATCAGGGAAGGAGACCAGATAAGCATCAGGGTTACTGATTCTGTAG AGAAACAGCCTGTCCCCGGAGCAGATGTATTCTTTGGAGGGCAGAAAGTTGAAGGTCAGACAGGTACGGACGGCACTGTA TCTTACTGGGTAACCGCTCCGGGCACATTCACAGTAAATGCTACAAAAGCAGGTTATGAAGAAGGAGAAATTATTGTTGA AGTCTCTGAAGACAAAGCCGAATTCGAGTTTTCAGACCTCTTAATTGAACCTGCTTCTGTTAAGGGCGGAGATGCAGTCA CAATCCAGGTAAATGTTACAAACACCGGTAACATTGCAGGAGAAACCGAAGTGGAACTTCTGGTCAACAATGAAACCGTG GACTCCGAAACCGTAAGCCTGGAAGCTGGCGAGACCACAACAGTCGAATTCTCGCACACTGAAAAGGAACAGGGCGACTA TACGATTGAGATAGGAGACCTGAGCGGAACTTACGAAGTAACGAAATCAACTCCCTTCCTGACCGGCGCTGCAACCATCG GCATACTTGCCACAGCATTTATACTGCTAAGGAAAAGAAGGGACTGA
Upstream 100 bases:
>100_bases AAAAAATCCAGGGGAGTACTCAGGAACTTTTTTGTTTCTATTTCTCCCGGACTTCCTTACGGCCAAACCCCTGCTCCAAT CCATTAAAAGGAGGTTTAAC
Downstream 100 bases:
>100_bases ACAGGTTTCTTCTTTTTCGTAGCAGGGACCGGAAATATTTTTTGATTCCGGTCTTTTTCTTCTTTTTTGTTTTTTAAGCA CCATTCAGGACTTATTTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 868; Mature: 867
Protein sequence:
>868_residues MGNKNYLKILCLFLMLGLLCESAAAQVSGSSGNRIWDANLSQNLTYTWTPQTYSGFYYDLDTGEGSENMTIQLTEGSRSV QRNGLQYETRPIETNFEYGNWGSYQVIGFMAERYFAGYTENSNFVNDDISVISDGQLSKILIDSDDRKSLYTGSSLILEE GYSLNIVEVDVNGNTVWVQLEKDGDVIDNGFLSSNSNYVYETDLGDADDVPLIAVHLAQIFRGTETNAIFVEGIFQISDE YVQIENGDRFGKMEISSTSSSGIIMRNRDSFTLGRGDTVDIMGKLSFVVADSSELRFAPIVEISEPGTYELRGTVHDETF NTTVWTPYNFEGFYYSIDENVSTESLTLTEEISGRSIDDEALVYSTSPALVKFEQESWGSYQVIGFMAEKYFAGYPANTF GNSRSVSVLSDDILAKVLIDDDHKRSMFTGSSIALENGYSLKAAEVDVNGNRVLLELYRDGELVDSGITSSNGDYIYEAD IGGAEDVPMIAAHISTVFRSRETDAVFIEGIFQVSDDYLELSQGDSFGKMEISTISSSGITMKNEDSISLSRGNTISLMG NVSFKVADSNVLRFYPFVEVKSAPQDQLRIETPDVFVVGEAAEISVTARDAAVSDVEIRLGNQSIGTTGDDGILAYTPTL EGDFTLYANKAGYLSGSKDVDIVGAGVLKLLLSVSPENIREGDQISIRVTDSVEKQPVPGADVFFGGQKVEGQTGTDGTV SYWVTAPGTFTVNATKAGYEEGEIIVEVSEDKAEFEFSDLLIEPASVKGGDAVTIQVNVTNTGNIAGETEVELLVNNETV DSETVSLEAGETTTVEFSHTEKEQGDYTIEIGDLSGTYEVTKSTPFLTGAATIGILATAFILLRKRRD
Sequences:
>Translated_868_residues MGNKNYLKILCLFLMLGLLCESAAAQVSGSSGNRIWDANLSQNLTYTWTPQTYSGFYYDLDTGEGSENMTIQLTEGSRSV QRNGLQYETRPIETNFEYGNWGSYQVIGFMAERYFAGYTENSNFVNDDISVISDGQLSKILIDSDDRKSLYTGSSLILEE GYSLNIVEVDVNGNTVWVQLEKDGDVIDNGFLSSNSNYVYETDLGDADDVPLIAVHLAQIFRGTETNAIFVEGIFQISDE YVQIENGDRFGKMEISSTSSSGIIMRNRDSFTLGRGDTVDIMGKLSFVVADSSELRFAPIVEISEPGTYELRGTVHDETF NTTVWTPYNFEGFYYSIDENVSTESLTLTEEISGRSIDDEALVYSTSPALVKFEQESWGSYQVIGFMAEKYFAGYPANTF GNSRSVSVLSDDILAKVLIDDDHKRSMFTGSSIALENGYSLKAAEVDVNGNRVLLELYRDGELVDSGITSSNGDYIYEAD IGGAEDVPMIAAHISTVFRSRETDAVFIEGIFQVSDDYLELSQGDSFGKMEISTISSSGITMKNEDSISLSRGNTISLMG NVSFKVADSNVLRFYPFVEVKSAPQDQLRIETPDVFVVGEAAEISVTARDAAVSDVEIRLGNQSIGTTGDDGILAYTPTL EGDFTLYANKAGYLSGSKDVDIVGAGVLKLLLSVSPENIREGDQISIRVTDSVEKQPVPGADVFFGGQKVEGQTGTDGTV SYWVTAPGTFTVNATKAGYEEGEIIVEVSEDKAEFEFSDLLIEPASVKGGDAVTIQVNVTNTGNIAGETEVELLVNNETV DSETVSLEAGETTTVEFSHTEKEQGDYTIEIGDLSGTYEVTKSTPFLTGAATIGILATAFILLRKRRD >Mature_867_residues GNKNYLKILCLFLMLGLLCESAAAQVSGSSGNRIWDANLSQNLTYTWTPQTYSGFYYDLDTGEGSENMTIQLTEGSRSVQ RNGLQYETRPIETNFEYGNWGSYQVIGFMAERYFAGYTENSNFVNDDISVISDGQLSKILIDSDDRKSLYTGSSLILEEG YSLNIVEVDVNGNTVWVQLEKDGDVIDNGFLSSNSNYVYETDLGDADDVPLIAVHLAQIFRGTETNAIFVEGIFQISDEY VQIENGDRFGKMEISSTSSSGIIMRNRDSFTLGRGDTVDIMGKLSFVVADSSELRFAPIVEISEPGTYELRGTVHDETFN TTVWTPYNFEGFYYSIDENVSTESLTLTEEISGRSIDDEALVYSTSPALVKFEQESWGSYQVIGFMAEKYFAGYPANTFG NSRSVSVLSDDILAKVLIDDDHKRSMFTGSSIALENGYSLKAAEVDVNGNRVLLELYRDGELVDSGITSSNGDYIYEADI GGAEDVPMIAAHISTVFRSRETDAVFIEGIFQVSDDYLELSQGDSFGKMEISTISSSGITMKNEDSISLSRGNTISLMGN VSFKVADSNVLRFYPFVEVKSAPQDQLRIETPDVFVVGEAAEISVTARDAAVSDVEIRLGNQSIGTTGDDGILAYTPTLE GDFTLYANKAGYLSGSKDVDIVGAGVLKLLLSVSPENIREGDQISIRVTDSVEKQPVPGADVFFGGQKVEGQTGTDGTVS YWVTAPGTFTVNATKAGYEEGEIIVEVSEDKAEFEFSDLLIEPASVKGGDAVTIQVNVTNTGNIAGETEVELLVNNETVD SETVSLEAGETTTVEFSHTEKEQGDYTIEIGDLSGTYEVTKSTPFLTGAATIGILATAFILLRKRRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94633; Mature: 94502
Theoretical pI: Translated: 3.92; Mature: 3.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNKNYLKILCLFLMLGLLCESAAAQVSGSSGNRIWDANLSQNLTYTWTPQTYSGFYYDL CCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEECCCCCCCEEEECCCCCCCEEEEE DTGEGSENMTIQLTEGSRSVQRNGLQYETRPIETNFEYGNWGSYQVIGFMAERYFAGYTE CCCCCCCCEEEEEECCCCHHHHCCCEEEECEEECCCCCCCCCCEEEEEEEHHHHHCCCCC NSNFVNDDISVISDGQLSKILIDSDDRKSLYTGSSLILEEGYSLNIVEVDVNGNTVWVQL CCCEECCCCEEECCCCEEEEEECCCCCCEEECCCEEEEECCCEEEEEEEEECCCEEEEEE EKDGDVIDNGFLSSNSNYVYETDLGDADDVPLIAVHLAQIFRGTETNAIFVEGIFQISDE CCCCCEEECCEECCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEEEECCE YVQIENGDRFGKMEISSTSSSGIIMRNRDSFTLGRGDTVDIMGKLSFVVADSSELRFAPI EEEEECCCCEEEEEEECCCCCCEEEECCCCEEECCCCEEEEEEEEEEEEECCCCCEEEEE VEISEPGTYELRGTVHDETFNTTVWTPYNFEGFYYSIDENVSTESLTLTEEISGRSIDDE EEECCCCCEEEEEEEECCCCCCEEECCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCC ALVYSTSPALVKFEQESWGSYQVIGFMAEKYFAGYPANTFGNSRSVSVLSDDILAKVLID EEEEECCCCEEEEECCCCCCEEEEEEEHHHHHCCCCCCCCCCCCEEEEECCCEEEEEEEC DDHKRSMFTGSSIALENGYSLKAAEVDVNGNRVLLELYRDGELVDSGITSSNGDYIYEAD CCCCCEEECCCEEEEECCCEEEEEEEECCCCEEEEEEECCCCEEECCCCCCCCCEEEEEC IGGAEDVPMIAAHISTVFRSRETDAVFIEGIFQVSDDYLELSQGDSFGKMEISTISSSGI CCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEECCCCCCCEEEEEEECCCCC TMKNEDSISLSRGNTISLMGNVSFKVADSNVLRFYPFVEVKSAPQDQLRIETPDVFVVGE EEECCCCEEEECCCEEEEEEEEEEEEECCCEEEEEEEEEECCCCCHHEEEECCCEEEEEC AAEISVTARDAAVSDVEIRLGNQSIGTTGDDGILAYTPTLEGDFTLYANKAGYLSGSKDV CEEEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCE DIVGAGVLKLLLSVSPENIREGDQISIRVTDSVEKQPVPGADVFFGGQKVEGQTGTDGTV EEECHHHHHHHHHCCCHHCCCCCEEEEEEECCCCCCCCCCCCEEECCEEECCCCCCCCEE SYWVTAPGTFTVNATKAGYEEGEIIVEVSEDKAEFEFSDLLIEPASVKGGDAVTIQVNVT EEEEECCCEEEEEEECCCCCCCCEEEEECCCCCCEEEEHEEEECCCCCCCCEEEEEEEEC NTGNIAGETEVELLVNNETVDSETVSLEAGETTTVEFSHTEKEQGDYTIEIGDLSGTYEV CCCCCCCCEEEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCCEEEEEECCCCEEEE TKSTPFLTGAATIGILATAFILLRKRRD ECCCCEEEHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GNKNYLKILCLFLMLGLLCESAAAQVSGSSGNRIWDANLSQNLTYTWTPQTYSGFYYDL CCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEECCCCCCCEEEECCCCCCCEEEEE DTGEGSENMTIQLTEGSRSVQRNGLQYETRPIETNFEYGNWGSYQVIGFMAERYFAGYTE CCCCCCCCEEEEEECCCCHHHHCCCEEEECEEECCCCCCCCCCEEEEEEEHHHHHCCCCC NSNFVNDDISVISDGQLSKILIDSDDRKSLYTGSSLILEEGYSLNIVEVDVNGNTVWVQL CCCEECCCCEEECCCCEEEEEECCCCCCEEECCCEEEEECCCEEEEEEEEECCCEEEEEE EKDGDVIDNGFLSSNSNYVYETDLGDADDVPLIAVHLAQIFRGTETNAIFVEGIFQISDE CCCCCEEECCEECCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEEEECCE YVQIENGDRFGKMEISSTSSSGIIMRNRDSFTLGRGDTVDIMGKLSFVVADSSELRFAPI EEEEECCCCEEEEEEECCCCCCEEEECCCCEEECCCCEEEEEEEEEEEEECCCCCEEEEE VEISEPGTYELRGTVHDETFNTTVWTPYNFEGFYYSIDENVSTESLTLTEEISGRSIDDE EEECCCCCEEEEEEEECCCCCCEEECCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCC ALVYSTSPALVKFEQESWGSYQVIGFMAEKYFAGYPANTFGNSRSVSVLSDDILAKVLID EEEEECCCCEEEEECCCCCCEEEEEEEHHHHHCCCCCCCCCCCCEEEEECCCEEEEEEEC DDHKRSMFTGSSIALENGYSLKAAEVDVNGNRVLLELYRDGELVDSGITSSNGDYIYEAD CCCCCEEECCCEEEEECCCEEEEEEEECCCCEEEEEEECCCCEEECCCCCCCCCEEEEEC IGGAEDVPMIAAHISTVFRSRETDAVFIEGIFQVSDDYLELSQGDSFGKMEISTISSSGI CCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEECCCCCCCEEEEEEECCCCC TMKNEDSISLSRGNTISLMGNVSFKVADSNVLRFYPFVEVKSAPQDQLRIETPDVFVVGE EEECCCCEEEECCCEEEEEEEEEEEEECCCEEEEEEEEEECCCCCHHEEEECCCEEEEEC AAEISVTARDAAVSDVEIRLGNQSIGTTGDDGILAYTPTLEGDFTLYANKAGYLSGSKDV CEEEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCE DIVGAGVLKLLLSVSPENIREGDQISIRVTDSVEKQPVPGADVFFGGQKVEGQTGTDGTV EEECHHHHHHHHHCCCHHCCCCCEEEEEEECCCCCCCCCCCCEEECCEEECCCCCCCCEE SYWVTAPGTFTVNATKAGYEEGEIIVEVSEDKAEFEFSDLLIEPASVKGGDAVTIQVNVT EEEEECCCEEEEEEECCCCCCCCEEEEECCCCCCEEEEHEEEECCCCCCCCEEEEEEEEC NTGNIAGETEVELLVNNETVDSETVSLEAGETTTVEFSHTEKEQGDYTIEIGDLSGTYEV CCCCCCCCEEEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCCEEEEEECCCCEEEE TKSTPFLTGAATIGILATAFILLRKRRD ECCCCEEEHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA