Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is cbiN [H]

Identifier: 21226566

GI number: 21226566

Start: 585209

End: 585550

Strand: Reverse

Name: cbiN [H]

Synonym: MM_0464

Alternate gene names: 21226566

Gene position: 585550-585209 (Counterclockwise)

Preceding gene: 21226567

Following gene: 21226565

Centisome position: 14.29

GC content: 44.44

Gene sequence:

>342_bases
ATGAGCAGAAAACTGGAACTTATTGTACTCGCAATTTTCCTGGTCTTTGCAGTGCAGTTCGTTTATATGTCATCCACGTC
AGACGCCGAATACGGAGGAGCTGACGGGGAAGCTGAAAATGTTATCAATGAGATCACCGGCGGAACCTATGAGCCAAATG
CAGAACCTTTCTGGGAGCCTCCAAGTGGTGAAATTGAAAGCCTCCTCTTTGGCCTTCAGGCAGCTATCGGCGCAGGGATT
ATCGGTTATTTCCTTGGCTACTACAAGGCAAAAGGCCGATACGAAAACGATCTTGGATATAAAGATAAAAAAAAGTCAGA
AAGTGACAAACATTCCTTATAA

Upstream 100 bases:

>100_bases
CCCTGCTCTTCAAGTACGTTGTCAACGTCAAGAGCGACATCCTGGTTGAAATGAAAGTCATTGAAGATGCTGTTGTAAGA
AAACTGAGAGGTATTTCCGC

Downstream 100 bases:

>100_bases
TTTCTTTTCTACCCCTTTACTTTCCTGCCTTCATTGCAGGAAAGTTTTTATCTTTTGCCTATTATTTTTAACCTTTGATT
TTTGCTTAAATCCACAATCT

Product: cobalt transport protein CbiN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MSRKLELIVLAIFLVFAVQFVYMSSTSDAEYGGADGEAENVINEITGGTYEPNAEPFWEPPSGEIESLLFGLQAAIGAGI
IGYFLGYYKAKGRYENDLGYKDKKKSESDKHSL

Sequences:

>Translated_113_residues
MSRKLELIVLAIFLVFAVQFVYMSSTSDAEYGGADGEAENVINEITGGTYEPNAEPFWEPPSGEIESLLFGLQAAIGAGI
IGYFLGYYKAKGRYENDLGYKDKKKSESDKHSL
>Mature_112_residues
SRKLELIVLAIFLVFAVQFVYMSSTSDAEYGGADGEAENVINEITGGTYEPNAEPFWEPPSGEIESLLFGLQAAIGAGII
GYFLGYYKAKGRYENDLGYKDKKKSESDKHSL

Specific function: May be involved with cobalt transport in association with cobalamin biosynthesis [H]

COG id: COG1930

COG function: function code P; ABC-type cobalt transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiN family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003705 [H]

Pfam domain/function: PF02553 CbiN [H]

EC number: NA

Molecular weight: Translated: 12428; Mature: 12297

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKLELIVLAIFLVFAVQFVYMSSTSDAEYGGADGEAENVINEITGGTYEPNAEPFWEP
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
PSGEIESLLFGLQAAIGAGIIGYFLGYYKAKGRYENDLGYKDKKKSESDKHSL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SRKLELIVLAIFLVFAVQFVYMSSTSDAEYGGADGEAENVINEITGGTYEPNAEPFWEP
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
PSGEIESLLFGLQAAIGAGIIGYFLGYYKAKGRYENDLGYKDKKKSESDKHSL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA