| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226519
Identifier: 21226519
GI number: 21226519
Start: 529797
End: 530582
Strand: Reverse
Name: 21226519
Synonym: MM_0417
Alternate gene names: NA
Gene position: 530582-529797 (Counterclockwise)
Preceding gene: 21226520
Following gene: 21226518
Centisome position: 12.95
GC content: 43.51
Gene sequence:
>786_bases GTGGTAAGTATGGAACTTGATAAAAGAGTTGACGAAATAGAAACCGAACTTAAAATCATGAAAGGGGAGATCAAAGAATT ACTCGTTGACATAAGAGACCTTGTGAATAAAAATGAAAATCCTTTCTGCAGCATCCCATGCTCTGAGACATTAAAAAGCC CGGCACCGGCTAAAGATGAAATTGAATGTAACCAGCCAGGCGTGGCCGGGAATGAAGACGCAGAATGCAGGCTTTGTGAA GGAGCTTCGGAAACAGAGAATCAAACTATAAAGAAGAACGAAGATTCCCTGCAACCAGTCATATCAGACCGGAAAAGTCC TGTACAAAATATCAGGAAACAGGAAGAACACAGACCTAAACCTGAGAGCTTCCGGAAAATCGATACGTTTATGCTTGTCG AACTTATGCGCTGGGTGGACTATGCTGTCAGGACAGTAGGTCACGAAAACCTCGAAGGACTTCTGAACCTCTATGCTCTT ACGGGACATCTCCCTGAAGAGACGAAAAAGATCATCGAAAACATTGCAAACCTCTCAATTGAAGAGCCCGCTGAAGAAGA CAGGGTCAGTATGAAAGATAACATAACTGTACTTTCGCAGTTGAGTGCAATCCTGAGCCCTGAAGGTTTCAGGAAGAATA TCCAGCCATTTTATGAAACTCCGGGCTGGAGAGATAAAGAAAATGAGAAAAAAACAGGGCTTGTCTCAGTTGAATTTAAG CCTCAGAAAGCTGAGAGGTCAAAACGAGCTGCTTCCAGCAAATCTGATACCAGGCGGCGCATTTGA
Upstream 100 bases:
>100_bases CACCACAGCTTGATAAAGTTATGGTCCTGAAGTAACCCCAGTAAGGGGATACTTCCCCTTTTACTGCTATAAAAACGGAA ATTTTTATTTTCGTTATCAG
Downstream 100 bases:
>100_bases GGCAGGTAGATACATCTTCATAAATCGAATCAAACTTTCATAAACTAAAATCAAATCTTCGTAAATTAAGATTCTATAAT TGAGAAATTGTCATCTCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MVSMELDKRVDEIETELKIMKGEIKELLVDIRDLVNKNENPFCSIPCSETLKSPAPAKDEIECNQPGVAGNEDAECRLCE GASETENQTIKKNEDSLQPVISDRKSPVQNIRKQEEHRPKPESFRKIDTFMLVELMRWVDYAVRTVGHENLEGLLNLYAL TGHLPEETKKIIENIANLSIEEPAEEDRVSMKDNITVLSQLSAILSPEGFRKNIQPFYETPGWRDKENEKKTGLVSVEFK PQKAERSKRAASSKSDTRRRI
Sequences:
>Translated_261_residues MVSMELDKRVDEIETELKIMKGEIKELLVDIRDLVNKNENPFCSIPCSETLKSPAPAKDEIECNQPGVAGNEDAECRLCE GASETENQTIKKNEDSLQPVISDRKSPVQNIRKQEEHRPKPESFRKIDTFMLVELMRWVDYAVRTVGHENLEGLLNLYAL TGHLPEETKKIIENIANLSIEEPAEEDRVSMKDNITVLSQLSAILSPEGFRKNIQPFYETPGWRDKENEKKTGLVSVEFK PQKAERSKRAASSKSDTRRRI >Mature_261_residues MVSMELDKRVDEIETELKIMKGEIKELLVDIRDLVNKNENPFCSIPCSETLKSPAPAKDEIECNQPGVAGNEDAECRLCE GASETENQTIKKNEDSLQPVISDRKSPVQNIRKQEEHRPKPESFRKIDTFMLVELMRWVDYAVRTVGHENLEGLLNLYAL TGHLPEETKKIIENIANLSIEEPAEEDRVSMKDNITVLSQLSAILSPEGFRKNIQPFYETPGWRDKENEKKTGLVSVEFK PQKAERSKRAASSKSDTRRRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29795; Mature: 29795
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSMELDKRVDEIETELKIMKGEIKELLVDIRDLVNKNENPFCSIPCSETLKSPAPAKDE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHCCCCCCCCC IECNQPGVAGNEDAECRLCEGASETENQTIKKNEDSLQPVISDRKSPVQNIRKQEEHRPK CCCCCCCCCCCCCCCEEECCCCCCHHCCHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCC PESFRKIDTFMLVELMRWVDYAVRTVGHENLEGLLNLYALTGHLPEETKKIIENIANLSI HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC EEPAEEDRVSMKDNITVLSQLSAILSPEGFRKNIQPFYETPGWRDKENEKKTGLVSVEFK CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHCCCCCCCCCCCCCCCEEEEEEC PQKAERSKRAASSKSDTRRRI CHHHHHHHHHHCCCCHHHCCC >Mature Secondary Structure MVSMELDKRVDEIETELKIMKGEIKELLVDIRDLVNKNENPFCSIPCSETLKSPAPAKDE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHCCCCCCCCC IECNQPGVAGNEDAECRLCEGASETENQTIKKNEDSLQPVISDRKSPVQNIRKQEEHRPK CCCCCCCCCCCCCCCEEECCCCCCHHCCHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCC PESFRKIDTFMLVELMRWVDYAVRTVGHENLEGLLNLYALTGHLPEETKKIIENIANLSI HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC EEPAEEDRVSMKDNITVLSQLSAILSPEGFRKNIQPFYETPGWRDKENEKKTGLVSVEFK CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHCCCCCCCCCCCCCCCEEEEEEC PQKAERSKRAASSKSDTRRRI CHHHHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA