Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226519

Identifier: 21226519

GI number: 21226519

Start: 529797

End: 530582

Strand: Reverse

Name: 21226519

Synonym: MM_0417

Alternate gene names: NA

Gene position: 530582-529797 (Counterclockwise)

Preceding gene: 21226520

Following gene: 21226518

Centisome position: 12.95

GC content: 43.51

Gene sequence:

>786_bases
GTGGTAAGTATGGAACTTGATAAAAGAGTTGACGAAATAGAAACCGAACTTAAAATCATGAAAGGGGAGATCAAAGAATT
ACTCGTTGACATAAGAGACCTTGTGAATAAAAATGAAAATCCTTTCTGCAGCATCCCATGCTCTGAGACATTAAAAAGCC
CGGCACCGGCTAAAGATGAAATTGAATGTAACCAGCCAGGCGTGGCCGGGAATGAAGACGCAGAATGCAGGCTTTGTGAA
GGAGCTTCGGAAACAGAGAATCAAACTATAAAGAAGAACGAAGATTCCCTGCAACCAGTCATATCAGACCGGAAAAGTCC
TGTACAAAATATCAGGAAACAGGAAGAACACAGACCTAAACCTGAGAGCTTCCGGAAAATCGATACGTTTATGCTTGTCG
AACTTATGCGCTGGGTGGACTATGCTGTCAGGACAGTAGGTCACGAAAACCTCGAAGGACTTCTGAACCTCTATGCTCTT
ACGGGACATCTCCCTGAAGAGACGAAAAAGATCATCGAAAACATTGCAAACCTCTCAATTGAAGAGCCCGCTGAAGAAGA
CAGGGTCAGTATGAAAGATAACATAACTGTACTTTCGCAGTTGAGTGCAATCCTGAGCCCTGAAGGTTTCAGGAAGAATA
TCCAGCCATTTTATGAAACTCCGGGCTGGAGAGATAAAGAAAATGAGAAAAAAACAGGGCTTGTCTCAGTTGAATTTAAG
CCTCAGAAAGCTGAGAGGTCAAAACGAGCTGCTTCCAGCAAATCTGATACCAGGCGGCGCATTTGA

Upstream 100 bases:

>100_bases
CACCACAGCTTGATAAAGTTATGGTCCTGAAGTAACCCCAGTAAGGGGATACTTCCCCTTTTACTGCTATAAAAACGGAA
ATTTTTATTTTCGTTATCAG

Downstream 100 bases:

>100_bases
GGCAGGTAGATACATCTTCATAAATCGAATCAAACTTTCATAAACTAAAATCAAATCTTCGTAAATTAAGATTCTATAAT
TGAGAAATTGTCATCTCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MVSMELDKRVDEIETELKIMKGEIKELLVDIRDLVNKNENPFCSIPCSETLKSPAPAKDEIECNQPGVAGNEDAECRLCE
GASETENQTIKKNEDSLQPVISDRKSPVQNIRKQEEHRPKPESFRKIDTFMLVELMRWVDYAVRTVGHENLEGLLNLYAL
TGHLPEETKKIIENIANLSIEEPAEEDRVSMKDNITVLSQLSAILSPEGFRKNIQPFYETPGWRDKENEKKTGLVSVEFK
PQKAERSKRAASSKSDTRRRI

Sequences:

>Translated_261_residues
MVSMELDKRVDEIETELKIMKGEIKELLVDIRDLVNKNENPFCSIPCSETLKSPAPAKDEIECNQPGVAGNEDAECRLCE
GASETENQTIKKNEDSLQPVISDRKSPVQNIRKQEEHRPKPESFRKIDTFMLVELMRWVDYAVRTVGHENLEGLLNLYAL
TGHLPEETKKIIENIANLSIEEPAEEDRVSMKDNITVLSQLSAILSPEGFRKNIQPFYETPGWRDKENEKKTGLVSVEFK
PQKAERSKRAASSKSDTRRRI
>Mature_261_residues
MVSMELDKRVDEIETELKIMKGEIKELLVDIRDLVNKNENPFCSIPCSETLKSPAPAKDEIECNQPGVAGNEDAECRLCE
GASETENQTIKKNEDSLQPVISDRKSPVQNIRKQEEHRPKPESFRKIDTFMLVELMRWVDYAVRTVGHENLEGLLNLYAL
TGHLPEETKKIIENIANLSIEEPAEEDRVSMKDNITVLSQLSAILSPEGFRKNIQPFYETPGWRDKENEKKTGLVSVEFK
PQKAERSKRAASSKSDTRRRI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29795; Mature: 29795

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSMELDKRVDEIETELKIMKGEIKELLVDIRDLVNKNENPFCSIPCSETLKSPAPAKDE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHCCCCCCCCC
IECNQPGVAGNEDAECRLCEGASETENQTIKKNEDSLQPVISDRKSPVQNIRKQEEHRPK
CCCCCCCCCCCCCCCEEECCCCCCHHCCHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCC
PESFRKIDTFMLVELMRWVDYAVRTVGHENLEGLLNLYALTGHLPEETKKIIENIANLSI
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
EEPAEEDRVSMKDNITVLSQLSAILSPEGFRKNIQPFYETPGWRDKENEKKTGLVSVEFK
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHCCCCCCCCCCCCCCCEEEEEEC
PQKAERSKRAASSKSDTRRRI
CHHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure
MVSMELDKRVDEIETELKIMKGEIKELLVDIRDLVNKNENPFCSIPCSETLKSPAPAKDE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHCCCCCCCCC
IECNQPGVAGNEDAECRLCEGASETENQTIKKNEDSLQPVISDRKSPVQNIRKQEEHRPK
CCCCCCCCCCCCCCCEEECCCCCCHHCCHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCC
PESFRKIDTFMLVELMRWVDYAVRTVGHENLEGLLNLYALTGHLPEETKKIIENIANLSI
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
EEPAEEDRVSMKDNITVLSQLSAILSPEGFRKNIQPFYETPGWRDKENEKKTGLVSVEFK
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHCCCCCCCCCCCCCCCEEEEEEC
PQKAERSKRAASSKSDTRRRI
CHHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA