| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is marR [C]
Identifier: 21226448
GI number: 21226448
Start: 453358
End: 453825
Strand: Reverse
Name: marR [C]
Synonym: MM_0346
Alternate gene names: 21226448
Gene position: 453825-453358 (Counterclockwise)
Preceding gene: 21226449
Following gene: 21226447
Centisome position: 11.08
GC content: 41.24
Gene sequence:
>468_bases GTGATGCCGATGAAAGAAGAACGAATAAAAGAGACGGTAAAGCTTCAATTTGACATGATTCATCTTTTTCATAAGAATTT TGCCAGAGCTTTTCATAAAACAGGCAGCGGTTCCTATAACCTGAATAAAAATCAGAATAAGGCAATCCTGATTATAGGTG CGGTTGGTGAAATAATGCCCACAACTCTGGGAAGATGCCTTGACCTTCAGAAAGGAAGCCTGACCAGCATGATAGATGCT CTGGAGAAAGAGGAGCTTGTCTACAGGAGAGGAGACCCGTCAGACCGGAGAAAGATCCTGGTTTCTCTTACTGAAAAAGG AGAGGATTACAGGAACTGGCTTATAGAAGAGCTTGAAAAAAATAATTCAGAAGTTTTAAGCAGGTTAACTGAAGAAGAGA TTGCAGCTTATCAGGAAGGCCTGAAAACAATTCTGGACACATTAAAAAAGCTGGACGAGAGCACCTGA
Upstream 100 bases:
>100_bases AAAGAAGACTGACTGGATCATAAACGCCTCTCAAAAAGACCTCTGACGGATTTTAATATGGTTTTATCATCCGGGTCAGG ACTGAAAAAAGTGCCTCATT
Downstream 100 bases:
>100_bases AGAGGAAAAACGGCTTCTAAACACTGATTTGAGGTCTGCAATGCAAACTGAGCTAACAGGCAAACTTCAGAAACTTGGAT TTACCGAAAACGAGGCAAAG
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcription Repressor; MarR Family Protein; Transcriptional Regulator MarR Family; Multidrug Resistance Operon Repressor
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MMPMKEERIKETVKLQFDMIHLFHKNFARAFHKTGSGSYNLNKNQNKAILIIGAVGEIMPTTLGRCLDLQKGSLTSMIDA LEKEELVYRRGDPSDRRKILVSLTEKGEDYRNWLIEELEKNNSEVLSRLTEEEIAAYQEGLKTILDTLKKLDEST
Sequences:
>Translated_155_residues MMPMKEERIKETVKLQFDMIHLFHKNFARAFHKTGSGSYNLNKNQNKAILIIGAVGEIMPTTLGRCLDLQKGSLTSMIDA LEKEELVYRRGDPSDRRKILVSLTEKGEDYRNWLIEELEKNNSEVLSRLTEEEIAAYQEGLKTILDTLKKLDEST >Mature_155_residues MMPMKEERIKETVKLQFDMIHLFHKNFARAFHKTGSGSYNLNKNQNKAILIIGAVGEIMPTTLGRCLDLQKGSLTSMIDA LEKEELVYRRGDPSDRRKILVSLTEKGEDYRNWLIEELEKNNSEVLSRLTEEEIAAYQEGLKTILDTLKKLDEST
Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17847; Mature: 17847
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPMKEERIKETVKLQFDMIHLFHKNFARAFHKTGSGSYNLNKNQNKAILIIGAVGEIMP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHHHH TTLGRCLDLQKGSLTSMIDALEKEELVYRRGDPSDRRKILVSLTEKGEDYRNWLIEELEK HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHC NNSEVLSRLTEEEIAAYQEGLKTILDTLKKLDEST CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMPMKEERIKETVKLQFDMIHLFHKNFARAFHKTGSGSYNLNKNQNKAILIIGAVGEIMP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHHHH TTLGRCLDLQKGSLTSMIDALEKEELVYRRGDPSDRRKILVSLTEKGEDYRNWLIEELEK HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHC NNSEVLSRLTEEEIAAYQEGLKTILDTLKKLDEST CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA