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The map label for this gene is trg [C]

Identifier: 21226435

GI number: 21226435

Start: 438177

End: 440174

Strand: Reverse

Name: trg [C]

Synonym: MM_0333

Alternate gene names: 21226435

Gene position: 440174-438177 (Counterclockwise)

Preceding gene: 161485681

Following gene: 21226434

Centisome position: 10.75

GC content: 42.29

Gene sequence:

>1998_bases
ATGTCTTCAATAGTTTCTGATTTTAAAAAGACAAAACCAAAAAACAGTGTAAAAAATATTCTTGAAGATACTGATTCAAA
AGCAAAGGAAATAAGCCTGTTAATAGACAGTCTTCCAGTAACTGTTTTCAGAATTTCAAATGAATCGTCCTGGGCTATAC
ACTATATAGGCAAGAGTGTAGAACAATTAACCGGTTACTCCAAAATGGATTTTATTACCCGGAAACTGACCTGGTCTGAT
CTTATTTGTCCAGAGGATATTCCTGCACTCAACAAGGTTGTACAGAAAGCGACGAAAAACAGGACTCCCTATCAGGTTGA
ATACAGAATTAAAAAAGCAGACGGCAGTACAGTATTCATTCAGGAACAGGCTCATCCGGTGAATGATGATAAGGGAAATT
TAGCTTATGTTGACGGTGTGTTTCTGGACGTCACTCAACAAATAATACGTAGAGAAGAGTCTCAGAAGGCAATTGTTAGC
AGCATACCCAAGCCATCACTTGCTCTTTATGTAGATGCTTCTGGAAAAATAAAATATATCAATGACTATTTTGTGAAAAT
GTGTAAGTTTAAAAGTGCCAGTGAAGCAATCGGTCTCTCTCCTGCTGACTTAATGGAGAGCAATAACAAAAAATCAATTG
CTGAAACAGTCCTTGAAACTGGAGAAGGAGTTTTCAATTTTGAAAGGGCGCTGAAACTTAAGGCTCAGGATAAACCACTG
CATACAGTAACTTCCTCCGTGCCGATAAAAGATGATACTGGAGCAATTGTTGCAAATCTTACTATTATTACTGATATGAC
GGAGATGAAGGAGAAGGAAAAAGAAATCCAGGATTTGCTGGAATATACTAACAGCTGCCTGAAGAATCTCGGAGACGGTA
TCAGAAAAATTGGTGAAGGCAACCTTGATGTCCAGCTCGAAAAGGTTAAAGATGATGATTTTGGCAATATTTTTGATGAA
TTTAATAAGCTTGTTTTTACTCTAAAATCCGTTATTGAGAATGTCCTTGAGGATATGCTTACTACTCTTGAAGAAGCCCG
CCAGTCCGAAGAAGCCGTTAACCAGATGAACATGGGAATGCAGCAGATTTCAACAGCGGCAGAGCAGATTGCAACCGGTT
CCGAGAACCTTTCCAGGCATGCAGGCGCAGCAGCTTCTGATATAAAAGCCTCCCAGGAAATCTTCAAAAAGCTCAGTGAC
TCTTCTACAAAATCTTCCAGTTATGCCTCCCAGGCTGGCAAAATCAGTGACGAAGCCCAGGATCTCAACAACATGGCTCT
GGATGGGGTGGAACAGTTTGTTGAAGAAATTTCCAAACTCGGAGATATTGTCCACTCCCTTGATGACGCTGTCAATAACA
TCGGAGCTGTCACAGGAAAAATCAAGTCCATTGCCGACCAGACCAACCTCCTTGCTTTAAATGCAGCTATCGAAGCAGCA
CGAGCCGGAGAATACGGCAGGGGTTTTGCTGTCGTTGCTGACGAGGTCAGGAAACTTGCAGCAGATTCGAGAAAGAGCAC
TGACGAAATAAATGAGATCGTTACAAACGTCCAGAAAGAGACCAAAAAGGTGACAGAAGCCATCAACACCGCAGACGGAC
AGGCGAAAACAGGAAGCAAAAACATCAAACAGGCCCTGAATAAGAGCCATGAGATTGTCGATGCGGTTGCCACTATAAAC
TCCATGCTTGCTGAGTTAGATAAGCTCTCGGATGAAGGTCTAAGCAGAGTTGAGAATATCGAGAAAAGCATAAGTGAGAC
CGCTTCAACAGCAGAAGAAAATGCTGCAAGCAGTGAAGAAACCTCTGCTGCAATTGAAGAACAGACAGCTGCCATGCAGC
AGGTGAGCACGTCTGTACAGAATGTCAGTGGGCTTGCCCAGAAAACGGTCAATACTCTCCTGGAAAACTTCGATGTGTCA
GGGGAAAAGAACAACGTCCAGCCTTCTCCCGGAAAACCACAGGGTTTTGACAGAAACAAGGTCTCAAAAATATACTGA

Upstream 100 bases:

>100_bases
ATCGTCTGACAGAAAGTTTCTTTTTATTACCTATACATTTAAATACTTTATATAATTATAATGATAGTTATTATATATAC
TCTTAGGGGATTGATTGAGC

Downstream 100 bases:

>100_bases
ATGTTGAATCTGTTTGATTGAGGGGTGATGAGGTGCAGCAGTTTTAACTTGCTGTTTCTTTAAAGCCCCTTTAAGGTGAT
AATATGAGTTATCATAGTCA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 665; Mature: 664

Protein sequence:

>665_residues
MSSIVSDFKKTKPKNSVKNILEDTDSKAKEISLLIDSLPVTVFRISNESSWAIHYIGKSVEQLTGYSKMDFITRKLTWSD
LICPEDIPALNKVVQKATKNRTPYQVEYRIKKADGSTVFIQEQAHPVNDDKGNLAYVDGVFLDVTQQIIRREESQKAIVS
SIPKPSLALYVDASGKIKYINDYFVKMCKFKSASEAIGLSPADLMESNNKKSIAETVLETGEGVFNFERALKLKAQDKPL
HTVTSSVPIKDDTGAIVANLTIITDMTEMKEKEKEIQDLLEYTNSCLKNLGDGIRKIGEGNLDVQLEKVKDDDFGNIFDE
FNKLVFTLKSVIENVLEDMLTTLEEARQSEEAVNQMNMGMQQISTAAEQIATGSENLSRHAGAAASDIKASQEIFKKLSD
SSTKSSSYASQAGKISDEAQDLNNMALDGVEQFVEEISKLGDIVHSLDDAVNNIGAVTGKIKSIADQTNLLALNAAIEAA
RAGEYGRGFAVVADEVRKLAADSRKSTDEINEIVTNVQKETKKVTEAINTADGQAKTGSKNIKQALNKSHEIVDAVATIN
SMLAELDKLSDEGLSRVENIEKSISETASTAEENAASSEETSAAIEEQTAAMQQVSTSVQNVSGLAQKTVNTLLENFDVS
GEKNNVQPSPGKPQGFDRNKVSKIY

Sequences:

>Translated_665_residues
MSSIVSDFKKTKPKNSVKNILEDTDSKAKEISLLIDSLPVTVFRISNESSWAIHYIGKSVEQLTGYSKMDFITRKLTWSD
LICPEDIPALNKVVQKATKNRTPYQVEYRIKKADGSTVFIQEQAHPVNDDKGNLAYVDGVFLDVTQQIIRREESQKAIVS
SIPKPSLALYVDASGKIKYINDYFVKMCKFKSASEAIGLSPADLMESNNKKSIAETVLETGEGVFNFERALKLKAQDKPL
HTVTSSVPIKDDTGAIVANLTIITDMTEMKEKEKEIQDLLEYTNSCLKNLGDGIRKIGEGNLDVQLEKVKDDDFGNIFDE
FNKLVFTLKSVIENVLEDMLTTLEEARQSEEAVNQMNMGMQQISTAAEQIATGSENLSRHAGAAASDIKASQEIFKKLSD
SSTKSSSYASQAGKISDEAQDLNNMALDGVEQFVEEISKLGDIVHSLDDAVNNIGAVTGKIKSIADQTNLLALNAAIEAA
RAGEYGRGFAVVADEVRKLAADSRKSTDEINEIVTNVQKETKKVTEAINTADGQAKTGSKNIKQALNKSHEIVDAVATIN
SMLAELDKLSDEGLSRVENIEKSISETASTAEENAASSEETSAAIEEQTAAMQQVSTSVQNVSGLAQKTVNTLLENFDVS
GEKNNVQPSPGKPQGFDRNKVSKIY
>Mature_664_residues
SSIVSDFKKTKPKNSVKNILEDTDSKAKEISLLIDSLPVTVFRISNESSWAIHYIGKSVEQLTGYSKMDFITRKLTWSDL
ICPEDIPALNKVVQKATKNRTPYQVEYRIKKADGSTVFIQEQAHPVNDDKGNLAYVDGVFLDVTQQIIRREESQKAIVSS
IPKPSLALYVDASGKIKYINDYFVKMCKFKSASEAIGLSPADLMESNNKKSIAETVLETGEGVFNFERALKLKAQDKPLH
TVTSSVPIKDDTGAIVANLTIITDMTEMKEKEKEIQDLLEYTNSCLKNLGDGIRKIGEGNLDVQLEKVKDDDFGNIFDEF
NKLVFTLKSVIENVLEDMLTTLEEARQSEEAVNQMNMGMQQISTAAEQIATGSENLSRHAGAAASDIKASQEIFKKLSDS
STKSSSYASQAGKISDEAQDLNNMALDGVEQFVEEISKLGDIVHSLDDAVNNIGAVTGKIKSIADQTNLLALNAAIEAAR
AGEYGRGFAVVADEVRKLAADSRKSTDEINEIVTNVQKETKKVTEAINTADGQAKTGSKNIKQALNKSHEIVDAVATINS
MLAELDKLSDEGLSRVENIEKSISETASTAEENAASSEETSAAIEEQTAAMQQVSTSVQNVSGLAQKTVNTLLENFDVSG
EKNNVQPSPGKPQGFDRNKVSKIY

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=329, Percent_Identity=29.7872340425532, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI1789453, Length=250, Percent_Identity=28.8, Blast_Score=99, Evalue=8e-22,
Organism=Escherichia coli, GI1788195, Length=306, Percent_Identity=27.7777777777778, Blast_Score=95, Evalue=2e-20,
Organism=Escherichia coli, GI1788194, Length=268, Percent_Identity=28.7313432835821, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI2367378, Length=315, Percent_Identity=26.984126984127, Blast_Score=91, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 72615; Mature: 72484

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS50885 HAMP ; PS50112 PAS ; PS50113 PAC ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSIVSDFKKTKPKNSVKNILEDTDSKAKEISLLIDSLPVTVFRISNESSWAIHYIGKSV
CCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCEEHHHHHHHH
EQLTGYSKMDFITRKLTWSDLICPEDIPALNKVVQKATKNRTPYQVEYRIKKADGSTVFI
HHHHCCHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEE
QEQAHPVNDDKGNLAYVDGVFLDVTQQIIRREESQKAIVSSIPKPSLALYVDASGKIKYI
ECCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEH
NDYFVKMCKFKSASEAIGLSPADLMESNNKKSIAETVLETGEGVFNFERALKLKAQDKPL
HHHHHHHHHCCCHHHHCCCCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCH
HTVTSSVPIKDDTGAIVANLTIITDMTEMKEKEKEIQDLLEYTNSCLKNLGDGIRKIGEG
HHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NLDVQLEKVKDDDFGNIFDEFNKLVFTLKSVIENVLEDMLTTLEEARQSEEAVNQMNMGM
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQISTAAEQIATGSENLSRHAGAAASDIKASQEIFKKLSDSSTKSSSYASQAGKISDEAQ
HHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHH
DLNNMALDGVEQFVEEISKLGDIVHSLDDAVNNIGAVTGKIKSIADQTNLLALNAAIEAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAGEYGRGFAVVADEVRKLAADSRKSTDEINEIVTNVQKETKKVTEAINTADGQAKTGSK
HCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
NIKQALNKSHEIVDAVATINSMLAELDKLSDEGLSRVENIEKSISETASTAEENAASSEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
TSAAIEEQTAAMQQVSTSVQNVSGLAQKTVNTLLENFDVSGEKNNVQPSPGKPQGFDRNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
VSKIY
CCCCC
>Mature Secondary Structure 
SSIVSDFKKTKPKNSVKNILEDTDSKAKEISLLIDSLPVTVFRISNESSWAIHYIGKSV
CHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCEEHHHHHHHH
EQLTGYSKMDFITRKLTWSDLICPEDIPALNKVVQKATKNRTPYQVEYRIKKADGSTVFI
HHHHCCHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEE
QEQAHPVNDDKGNLAYVDGVFLDVTQQIIRREESQKAIVSSIPKPSLALYVDASGKIKYI
ECCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEH
NDYFVKMCKFKSASEAIGLSPADLMESNNKKSIAETVLETGEGVFNFERALKLKAQDKPL
HHHHHHHHHCCCHHHHCCCCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCH
HTVTSSVPIKDDTGAIVANLTIITDMTEMKEKEKEIQDLLEYTNSCLKNLGDGIRKIGEG
HHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NLDVQLEKVKDDDFGNIFDEFNKLVFTLKSVIENVLEDMLTTLEEARQSEEAVNQMNMGM
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQISTAAEQIATGSENLSRHAGAAASDIKASQEIFKKLSDSSTKSSSYASQAGKISDEAQ
HHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHH
DLNNMALDGVEQFVEEISKLGDIVHSLDDAVNNIGAVTGKIKSIADQTNLLALNAAIEAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAGEYGRGFAVVADEVRKLAADSRKSTDEINEIVTNVQKETKKVTEAINTADGQAKTGSK
HCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
NIKQALNKSHEIVDAVATINSMLAELDKLSDEGLSRVENIEKSISETASTAEENAASSEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
TSAAIEEQTAAMQQVSTSVQNVSGLAQKTVNTLLENFDVSGEKNNVQPSPGKPQGFDRNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
VSKIY
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA