Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226423
Identifier: 21226423
GI number: 21226423
Start: 427911
End: 428579
Strand: Reverse
Name: 21226423
Synonym: MM_0321
Alternate gene names: NA
Gene position: 428579-427911 (Counterclockwise)
Preceding gene: 21226424
Following gene: 21226422
Centisome position: 10.46
GC content: 40.81
Gene sequence:
>669_bases ATGAATAGTGGGGAATCGTTTGACCAGTCCATGATTGATAAACTTGTAGCTACAGCTGAAAGCGATACTATAGAATACAA GGTTGCAAGCCTTGAAGAAGAGGTAACCGAGATCAAAGGCTCTATAAAGACTCTTCTCATGGACATCAGGGAAACGATGG GGGTCCTGGAAAATCCTTTCCAGAATATTCAGGGTATTGCCAATATTTCCAGTGCCATAGTGAATCCAAAGTCGATGGAA GATCAGCCTCAACCTCCGAAGAATGAAGAAATCGAAGAGGAGGACGAGCCTGAAGATGAAGACCTGGAAATGGAAAAAAT ACCAAAAAACCTCTTTGAAGACCTGAAAAAGGCTGCTAAAAACCAGCCTAAAAGGGCTGACTCGAAACTAATTGATCCCA TTTCCTTCTACAGGACCATTGTCTGGAGCAAGGACATGGTGGAGAAATATGACCAGAACGCCATAAAGGAATTAATTGAA GTGTTCTCTCTCCTGGGATATATTCCAGGTGAAATTAAGGAAATTATTGTTAAAGTCATTGAGATTCTGATCAAAAATAA CAACCTTGATGATGCAGTTGTGGACCTGTACAGACTTTATCACATACTTTATCCAGAAGACATGTCTCTTGACTCCAAGG TGCTGGATCACATCCTGAATGAAAGATAA
Upstream 100 bases:
>100_bases GATATAATGACACTCGTCTAAAATTAAAATTAAAGCAATAATGACATTCCTCGGGGTGCCATTATCTTTTATTTTTTTAA CGCTACAGTTGGGTGATATG
Downstream 100 bases:
>100_bases AACGGTGAAGAACGCATGTCAAAGGAAGTGATAACTTCAGCGATACTCGTAATAGTGAGTGTAATAGCTGCAGTGGCTTT TGTTAATGCCATCCTTCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MNSGESFDQSMIDKLVATAESDTIEYKVASLEEEVTEIKGSIKTLLMDIRETMGVLENPFQNIQGIANISSAIVNPKSME DQPQPPKNEEIEEEDEPEDEDLEMEKIPKNLFEDLKKAAKNQPKRADSKLIDPISFYRTIVWSKDMVEKYDQNAIKELIE VFSLLGYIPGEIKEIIVKVIEILIKNNNLDDAVVDLYRLYHILYPEDMSLDSKVLDHILNER
Sequences:
>Translated_222_residues MNSGESFDQSMIDKLVATAESDTIEYKVASLEEEVTEIKGSIKTLLMDIRETMGVLENPFQNIQGIANISSAIVNPKSME DQPQPPKNEEIEEEDEPEDEDLEMEKIPKNLFEDLKKAAKNQPKRADSKLIDPISFYRTIVWSKDMVEKYDQNAIKELIE VFSLLGYIPGEIKEIIVKVIEILIKNNNLDDAVVDLYRLYHILYPEDMSLDSKVLDHILNER >Mature_222_residues MNSGESFDQSMIDKLVATAESDTIEYKVASLEEEVTEIKGSIKTLLMDIRETMGVLENPFQNIQGIANISSAIVNPKSME DQPQPPKNEEIEEEDEPEDEDLEMEKIPKNLFEDLKKAAKNQPKRADSKLIDPISFYRTIVWSKDMVEKYDQNAIKELIE VFSLLGYIPGEIKEIIVKVIEILIKNNNLDDAVVDLYRLYHILYPEDMSLDSKVLDHILNER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25477; Mature: 25477
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSGESFDQSMIDKLVATAESDTIEYKVASLEEEVTEIKGSIKTLLMDIRETMGVLENPF CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QNIQGIANISSAIVNPKSMEDQPQPPKNEEIEEEDEPEDEDLEMEKIPKNLFEDLKKAAK HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH NQPKRADSKLIDPISFYRTIVWSKDMVEKYDQNAIKELIEVFSLLGYIPGEIKEIIVKVI CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH EILIKNNNLDDAVVDLYRLYHILYPEDMSLDSKVLDHILNER HHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MNSGESFDQSMIDKLVATAESDTIEYKVASLEEEVTEIKGSIKTLLMDIRETMGVLENPF CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QNIQGIANISSAIVNPKSMEDQPQPPKNEEIEEEDEPEDEDLEMEKIPKNLFEDLKKAAK HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH NQPKRADSKLIDPISFYRTIVWSKDMVEKYDQNAIKELIEVFSLLGYIPGEIKEIIVKVI CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH EILIKNNNLDDAVVDLYRLYHILYPEDMSLDSKVLDHILNER HHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]