Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226423

Identifier: 21226423

GI number: 21226423

Start: 427911

End: 428579

Strand: Reverse

Name: 21226423

Synonym: MM_0321

Alternate gene names: NA

Gene position: 428579-427911 (Counterclockwise)

Preceding gene: 21226424

Following gene: 21226422

Centisome position: 10.46

GC content: 40.81

Gene sequence:

>669_bases
ATGAATAGTGGGGAATCGTTTGACCAGTCCATGATTGATAAACTTGTAGCTACAGCTGAAAGCGATACTATAGAATACAA
GGTTGCAAGCCTTGAAGAAGAGGTAACCGAGATCAAAGGCTCTATAAAGACTCTTCTCATGGACATCAGGGAAACGATGG
GGGTCCTGGAAAATCCTTTCCAGAATATTCAGGGTATTGCCAATATTTCCAGTGCCATAGTGAATCCAAAGTCGATGGAA
GATCAGCCTCAACCTCCGAAGAATGAAGAAATCGAAGAGGAGGACGAGCCTGAAGATGAAGACCTGGAAATGGAAAAAAT
ACCAAAAAACCTCTTTGAAGACCTGAAAAAGGCTGCTAAAAACCAGCCTAAAAGGGCTGACTCGAAACTAATTGATCCCA
TTTCCTTCTACAGGACCATTGTCTGGAGCAAGGACATGGTGGAGAAATATGACCAGAACGCCATAAAGGAATTAATTGAA
GTGTTCTCTCTCCTGGGATATATTCCAGGTGAAATTAAGGAAATTATTGTTAAAGTCATTGAGATTCTGATCAAAAATAA
CAACCTTGATGATGCAGTTGTGGACCTGTACAGACTTTATCACATACTTTATCCAGAAGACATGTCTCTTGACTCCAAGG
TGCTGGATCACATCCTGAATGAAAGATAA

Upstream 100 bases:

>100_bases
GATATAATGACACTCGTCTAAAATTAAAATTAAAGCAATAATGACATTCCTCGGGGTGCCATTATCTTTTATTTTTTTAA
CGCTACAGTTGGGTGATATG

Downstream 100 bases:

>100_bases
AACGGTGAAGAACGCATGTCAAAGGAAGTGATAACTTCAGCGATACTCGTAATAGTGAGTGTAATAGCTGCAGTGGCTTT
TGTTAATGCCATCCTTCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MNSGESFDQSMIDKLVATAESDTIEYKVASLEEEVTEIKGSIKTLLMDIRETMGVLENPFQNIQGIANISSAIVNPKSME
DQPQPPKNEEIEEEDEPEDEDLEMEKIPKNLFEDLKKAAKNQPKRADSKLIDPISFYRTIVWSKDMVEKYDQNAIKELIE
VFSLLGYIPGEIKEIIVKVIEILIKNNNLDDAVVDLYRLYHILYPEDMSLDSKVLDHILNER

Sequences:

>Translated_222_residues
MNSGESFDQSMIDKLVATAESDTIEYKVASLEEEVTEIKGSIKTLLMDIRETMGVLENPFQNIQGIANISSAIVNPKSME
DQPQPPKNEEIEEEDEPEDEDLEMEKIPKNLFEDLKKAAKNQPKRADSKLIDPISFYRTIVWSKDMVEKYDQNAIKELIE
VFSLLGYIPGEIKEIIVKVIEILIKNNNLDDAVVDLYRLYHILYPEDMSLDSKVLDHILNER
>Mature_222_residues
MNSGESFDQSMIDKLVATAESDTIEYKVASLEEEVTEIKGSIKTLLMDIRETMGVLENPFQNIQGIANISSAIVNPKSME
DQPQPPKNEEIEEEDEPEDEDLEMEKIPKNLFEDLKKAAKNQPKRADSKLIDPISFYRTIVWSKDMVEKYDQNAIKELIE
VFSLLGYIPGEIKEIIVKVIEILIKNNNLDDAVVDLYRLYHILYPEDMSLDSKVLDHILNER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25477; Mature: 25477

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSGESFDQSMIDKLVATAESDTIEYKVASLEEEVTEIKGSIKTLLMDIRETMGVLENPF
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNIQGIANISSAIVNPKSMEDQPQPPKNEEIEEEDEPEDEDLEMEKIPKNLFEDLKKAAK
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
NQPKRADSKLIDPISFYRTIVWSKDMVEKYDQNAIKELIEVFSLLGYIPGEIKEIIVKVI
CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
EILIKNNNLDDAVVDLYRLYHILYPEDMSLDSKVLDHILNER
HHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MNSGESFDQSMIDKLVATAESDTIEYKVASLEEEVTEIKGSIKTLLMDIRETMGVLENPF
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNIQGIANISSAIVNPKSMEDQPQPPKNEEIEEEDEPEDEDLEMEKIPKNLFEDLKKAAK
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
NQPKRADSKLIDPISFYRTIVWSKDMVEKYDQNAIKELIEVFSLLGYIPGEIKEIIVKVI
CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
EILIKNNNLDDAVVDLYRLYHILYPEDMSLDSKVLDHILNER
HHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]