Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21226421

Identifier: 21226421

GI number: 21226421

Start: 426944

End: 427417

Strand: Reverse

Name: 21226421

Synonym: MM_0319

Alternate gene names: NA

Gene position: 427417-426944 (Counterclockwise)

Preceding gene: 21226422

Following gene: 21226420

Centisome position: 10.43

GC content: 44.3

Gene sequence:

>474_bases
ATGGGCCTTGATACGATAATCGTGGCTTTCTTTGTAATCGGGACGGTTCTGGTTGTTGCAGGTACTCTGACAATGGGGAC
CAATAACCTTGTTGAGTCTTCTTATCACGGATACGTCTCAGCCCATCAAAGCATGATGGACCGGCTCCAGACCCGAATTG
AAATTCAGGATATAACATTCAACATTTCAACAAATCATGCGAGCTTTACGGTTGTGAATACAGGGGAGACCAGGTTACAC
AATTTCGACCACTGGGACATTATCCTGGTTAAAGACGGCCAGGCTTCTTACTTGAACAGGTCCGGTTACAGCATAAAGCC
TGAAATAGATCTCATAAATCCCAGAATCCTGGACCCTCACGAAAGTATTAACATTGAACTCTTAACCGAGCTTGAATCCG
GTGACAGCTTCATTGTAAAGATCATCACGGAAAATGGTATCGTCTCTTCCGCAGAGCATATTGTAGGTGAGTAA

Upstream 100 bases:

>100_bases
GCATCAATAGCGATTGATACCCTGCCGGCTGACATTTACAAAATCACCTTTTTCCTTTACAACGGGGTATCGACATCAGA
CACGTTCTCCAGGTGATATC

Downstream 100 bases:

>100_bases
TATGGGAGAAATAGAGGATAAAAAGAATATTATCTCAAGCGGCAATGATGAAATTGATAAAAAGTTAGGTGAGGGCATCC
CTCTGGGTTCTCTTGTGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MGLDTIIVAFFVIGTVLVVAGTLTMGTNNLVESSYHGYVSAHQSMMDRLQTRIEIQDITFNISTNHASFTVVNTGETRLH
NFDHWDIILVKDGQASYLNRSGYSIKPEIDLINPRILDPHESINIELLTELESGDSFIVKIITENGIVSSAEHIVGE

Sequences:

>Translated_157_residues
MGLDTIIVAFFVIGTVLVVAGTLTMGTNNLVESSYHGYVSAHQSMMDRLQTRIEIQDITFNISTNHASFTVVNTGETRLH
NFDHWDIILVKDGQASYLNRSGYSIKPEIDLINPRILDPHESINIELLTELESGDSFIVKIITENGIVSSAEHIVGE
>Mature_156_residues
GLDTIIVAFFVIGTVLVVAGTLTMGTNNLVESSYHGYVSAHQSMMDRLQTRIEIQDITFNISTNHASFTVVNTGETRLHN
FDHWDIILVKDGQASYLNRSGYSIKPEIDLINPRILDPHESINIELLTELESGDSFIVKIITENGIVSSAEHIVGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17402; Mature: 17271

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLDTIIVAFFVIGTVLVVAGTLTMGTNNLVESSYHGYVSAHQSMMDRLQTRIEIQDITF
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHEEEEEEEEE
NISTNHASFTVVNTGETRLHNFDHWDIILVKDGQASYLNRSGYSIKPEIDLINPRILDPH
EEECCCEEEEEEECCCHHCCCCCCEEEEEEECCCCCEECCCCCEECCCEEECCCEEECCC
ESINIELLTELESGDSFIVKIITENGIVSSAEHIVGE
CCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHCCC
>Mature Secondary Structure 
GLDTIIVAFFVIGTVLVVAGTLTMGTNNLVESSYHGYVSAHQSMMDRLQTRIEIQDITF
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHEEEEEEEEE
NISTNHASFTVVNTGETRLHNFDHWDIILVKDGQASYLNRSGYSIKPEIDLINPRILDPH
EEECCCEEEEEEECCCHHCCCCCCEEEEEEECCCCCEECCCCCEECCCEEECCCEEECCC
ESINIELLTELESGDSFIVKIITENGIVSSAEHIVGE
CCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]