Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226421
Identifier: 21226421
GI number: 21226421
Start: 426944
End: 427417
Strand: Reverse
Name: 21226421
Synonym: MM_0319
Alternate gene names: NA
Gene position: 427417-426944 (Counterclockwise)
Preceding gene: 21226422
Following gene: 21226420
Centisome position: 10.43
GC content: 44.3
Gene sequence:
>474_bases ATGGGCCTTGATACGATAATCGTGGCTTTCTTTGTAATCGGGACGGTTCTGGTTGTTGCAGGTACTCTGACAATGGGGAC CAATAACCTTGTTGAGTCTTCTTATCACGGATACGTCTCAGCCCATCAAAGCATGATGGACCGGCTCCAGACCCGAATTG AAATTCAGGATATAACATTCAACATTTCAACAAATCATGCGAGCTTTACGGTTGTGAATACAGGGGAGACCAGGTTACAC AATTTCGACCACTGGGACATTATCCTGGTTAAAGACGGCCAGGCTTCTTACTTGAACAGGTCCGGTTACAGCATAAAGCC TGAAATAGATCTCATAAATCCCAGAATCCTGGACCCTCACGAAAGTATTAACATTGAACTCTTAACCGAGCTTGAATCCG GTGACAGCTTCATTGTAAAGATCATCACGGAAAATGGTATCGTCTCTTCCGCAGAGCATATTGTAGGTGAGTAA
Upstream 100 bases:
>100_bases GCATCAATAGCGATTGATACCCTGCCGGCTGACATTTACAAAATCACCTTTTTCCTTTACAACGGGGTATCGACATCAGA CACGTTCTCCAGGTGATATC
Downstream 100 bases:
>100_bases TATGGGAGAAATAGAGGATAAAAAGAATATTATCTCAAGCGGCAATGATGAAATTGATAAAAAGTTAGGTGAGGGCATCC CTCTGGGTTCTCTTGTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MGLDTIIVAFFVIGTVLVVAGTLTMGTNNLVESSYHGYVSAHQSMMDRLQTRIEIQDITFNISTNHASFTVVNTGETRLH NFDHWDIILVKDGQASYLNRSGYSIKPEIDLINPRILDPHESINIELLTELESGDSFIVKIITENGIVSSAEHIVGE
Sequences:
>Translated_157_residues MGLDTIIVAFFVIGTVLVVAGTLTMGTNNLVESSYHGYVSAHQSMMDRLQTRIEIQDITFNISTNHASFTVVNTGETRLH NFDHWDIILVKDGQASYLNRSGYSIKPEIDLINPRILDPHESINIELLTELESGDSFIVKIITENGIVSSAEHIVGE >Mature_156_residues GLDTIIVAFFVIGTVLVVAGTLTMGTNNLVESSYHGYVSAHQSMMDRLQTRIEIQDITFNISTNHASFTVVNTGETRLHN FDHWDIILVKDGQASYLNRSGYSIKPEIDLINPRILDPHESINIELLTELESGDSFIVKIITENGIVSSAEHIVGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17402; Mature: 17271
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLDTIIVAFFVIGTVLVVAGTLTMGTNNLVESSYHGYVSAHQSMMDRLQTRIEIQDITF CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHEEEEEEEEE NISTNHASFTVVNTGETRLHNFDHWDIILVKDGQASYLNRSGYSIKPEIDLINPRILDPH EEECCCEEEEEEECCCHHCCCCCCEEEEEEECCCCCEECCCCCEECCCEEECCCEEECCC ESINIELLTELESGDSFIVKIITENGIVSSAEHIVGE CCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHCCC >Mature Secondary Structure GLDTIIVAFFVIGTVLVVAGTLTMGTNNLVESSYHGYVSAHQSMMDRLQTRIEIQDITF CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHEEEEEEEEE NISTNHASFTVVNTGETRLHNFDHWDIILVKDGQASYLNRSGYSIKPEIDLINPRILDPH EEECCCEEEEEEECCCHHCCCCCCEEEEEEECCCCCEECCCCCEECCCEEECCCEEECCC ESINIELLTELESGDSFIVKIITENGIVSSAEHIVGE CCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]