Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226377
Identifier: 21226377
GI number: 21226377
Start: 366310
End: 368112
Strand: Reverse
Name: 21226377
Synonym: MM_0275
Alternate gene names: NA
Gene position: 368112-366310 (Counterclockwise)
Preceding gene: 21226378
Following gene: 21226376
Centisome position: 8.99
GC content: 37.6
Gene sequence:
>1803_bases ATGACAAGGGAATTTCAGCATATAAGCAGATCGCAGTTTGTTCTTACTTATGGTCCGGGTTCCGTAATCGAAACTAAAAA AGGACCTCGGATTATTCCCTCACTGGAAAAAGGACTTGGTGAGAACTTTAATCCGGATACTTTTCGAAGATTTGAAATCG CAGAGACAAGGATTTCCAAGTACATTAAAAGCAGATCGGAAGAAAAAATAAATATTCGCATATTAGCTTTGCCTACAAAC GCTGGACTTGGAAAGCAAAGCAATTATCGTGTTTACTCAACATATGTTTTCCCGGTGTGGAAAGTCTGCTATGGAAGAAG AGGAAATCATGCCCCCATTTTGTATAACGGATCTAAATGCCCTCTATGTGAAACTAACGATGAATCTTCTGCAGTTAGAT TTGTTGCAGCGTGTCCAGATGGTCACCTCGATGAAGTAAACTGGAATTATGCTGTCCATAAAAACTCGTCATGTAAACCA GACTACTTCCGCTGGAAAGCAAATGGAAGTTCTCTAGAAGATATTATCATAGAATGTCCTATTTGTAGAGCTAGAAACAA TATGAAGGAAATTTACAAAATGAATTTTTTCTGTAAGGGAAGAATTCCTGAAAGAGAATCTCCTTCTAGCGATTATTTTC CCATTTATACCAAGCCTGATAGGTCAAAAAATTGTGAAAAAATGATGAAAATAATGCAGAGGCAGTCAACTTCACTCAGG GTTTCTGAAACAATGACCCTTTTGACAATTCCAGAATTCGATAATCAGATATCAAGAATTCTTCAAAGGTATGATGTTTC AATAGCTCTTGATACAATGATGAAAATGCCTTCCGATATTTTACTTAGGATGGATGCTAATACTGTTATAGACTGGATTT CAAGTAGTCTAAAAGGAAGAATTCCTGATGATTCGCTTGAAGTTATAAGCAAAGAAATTAGAGAAAAAGGTGTATTAGAG TTCTGTGATCTTTATAAACGCTTAAACGATGAAAGCAAATCTTTCATGAGTTTAATGTATGAAGAGTTTGATTCACTGCT ATCAGGAGCAGGAAGTTCAACCAAAAATTTTGTTATGGGGCATCCAAAAAAGATAATCTCAACCTCACCTCTCATTCCTG AATTGCTTGTTCACCCAATTAGTAAGATCAGAACAATCACAGTTCAGCTTGGCTACAGACGTATAGTACCAACTGCAGAT GAAAGTGAACCCCAATTGTTAGTATCATCAGGTGTGTATTTACCTTCGGATGGAAGTATTTGGTATCCAGGGTATGAAGG ATTTGGTGAAGGTATATTCATTACATTTGGTGAAAGAAAAATTCCTGATCTAACCTCAAAACTCGCCTACAACCTGTGGA AAGAATACACAGATTCAGGTATGAAATCTGATTCAGGGTGGTCGGAGGTTTCTGTAGAACCCGAATTTGTCTGGCTCCAT ACACTTTCTCATGCAGTCATCAGAGCTTTATCCTCACACACTGGTTATTCAGCAGTTTCACTGAGGGAAAGAATTTACAT ATCTCGTGATGGAAAAAATGGTGGTATTCTTATTTATAATACATCTCCAGGAGAAGATGGAGGAATGGGTGGACTTGTAG GGTCAGTAGACATATTCCACGAAATTATCAATAGTGCAGTTGGGAATATTTTGCTTTGTTCTAATGATCCCCTTTGTTGT GATGCAACTAAATCAGCAGACTGTGTAAATGGCGCGGCATGTTATAGTTGTCTTTTGATTTCTGAAACTTCATGTGAACA TAGGAACCTCTGGCTTGATAGGCATCTTCTCATTGGAGATTGA
Upstream 100 bases:
>100_bases GGGATCCAGCACATGAAAAGGTTGGTTTATGTGTTGTTTACAAAAACGCGCCACAATCTCTTCGTGAAATAGAAGAAACT ACTGCGTTTGAGGTGTAAAT
Downstream 100 bases:
>100_bases TGATGATTGAAGAAATTGTTCCTGTGGCTACGGGTGAAAAATGGGTTGGATACGGAATAAGGTCATTTAGATCGGTAATC AATGACCTGATTTCGAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 600; Mature: 599
Protein sequence:
>600_residues MTREFQHISRSQFVLTYGPGSVIETKKGPRIIPSLEKGLGENFNPDTFRRFEIAETRISKYIKSRSEEKINIRILALPTN AGLGKQSNYRVYSTYVFPVWKVCYGRRGNHAPILYNGSKCPLCETNDESSAVRFVAACPDGHLDEVNWNYAVHKNSSCKP DYFRWKANGSSLEDIIIECPICRARNNMKEIYKMNFFCKGRIPERESPSSDYFPIYTKPDRSKNCEKMMKIMQRQSTSLR VSETMTLLTIPEFDNQISRILQRYDVSIALDTMMKMPSDILLRMDANTVIDWISSSLKGRIPDDSLEVISKEIREKGVLE FCDLYKRLNDESKSFMSLMYEEFDSLLSGAGSSTKNFVMGHPKKIISTSPLIPELLVHPISKIRTITVQLGYRRIVPTAD ESEPQLLVSSGVYLPSDGSIWYPGYEGFGEGIFITFGERKIPDLTSKLAYNLWKEYTDSGMKSDSGWSEVSVEPEFVWLH TLSHAVIRALSSHTGYSAVSLRERIYISRDGKNGGILIYNTSPGEDGGMGGLVGSVDIFHEIINSAVGNILLCSNDPLCC DATKSADCVNGAACYSCLLISETSCEHRNLWLDRHLLIGD
Sequences:
>Translated_600_residues MTREFQHISRSQFVLTYGPGSVIETKKGPRIIPSLEKGLGENFNPDTFRRFEIAETRISKYIKSRSEEKINIRILALPTN AGLGKQSNYRVYSTYVFPVWKVCYGRRGNHAPILYNGSKCPLCETNDESSAVRFVAACPDGHLDEVNWNYAVHKNSSCKP DYFRWKANGSSLEDIIIECPICRARNNMKEIYKMNFFCKGRIPERESPSSDYFPIYTKPDRSKNCEKMMKIMQRQSTSLR VSETMTLLTIPEFDNQISRILQRYDVSIALDTMMKMPSDILLRMDANTVIDWISSSLKGRIPDDSLEVISKEIREKGVLE FCDLYKRLNDESKSFMSLMYEEFDSLLSGAGSSTKNFVMGHPKKIISTSPLIPELLVHPISKIRTITVQLGYRRIVPTAD ESEPQLLVSSGVYLPSDGSIWYPGYEGFGEGIFITFGERKIPDLTSKLAYNLWKEYTDSGMKSDSGWSEVSVEPEFVWLH TLSHAVIRALSSHTGYSAVSLRERIYISRDGKNGGILIYNTSPGEDGGMGGLVGSVDIFHEIINSAVGNILLCSNDPLCC DATKSADCVNGAACYSCLLISETSCEHRNLWLDRHLLIGD >Mature_599_residues TREFQHISRSQFVLTYGPGSVIETKKGPRIIPSLEKGLGENFNPDTFRRFEIAETRISKYIKSRSEEKINIRILALPTNA GLGKQSNYRVYSTYVFPVWKVCYGRRGNHAPILYNGSKCPLCETNDESSAVRFVAACPDGHLDEVNWNYAVHKNSSCKPD YFRWKANGSSLEDIIIECPICRARNNMKEIYKMNFFCKGRIPERESPSSDYFPIYTKPDRSKNCEKMMKIMQRQSTSLRV SETMTLLTIPEFDNQISRILQRYDVSIALDTMMKMPSDILLRMDANTVIDWISSSLKGRIPDDSLEVISKEIREKGVLEF CDLYKRLNDESKSFMSLMYEEFDSLLSGAGSSTKNFVMGHPKKIISTSPLIPELLVHPISKIRTITVQLGYRRIVPTADE SEPQLLVSSGVYLPSDGSIWYPGYEGFGEGIFITFGERKIPDLTSKLAYNLWKEYTDSGMKSDSGWSEVSVEPEFVWLHT LSHAVIRALSSHTGYSAVSLRERIYISRDGKNGGILIYNTSPGEDGGMGGLVGSVDIFHEIINSAVGNILLCSNDPLCCD ATKSADCVNGAACYSCLLISETSCEHRNLWLDRHLLIGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67665; Mature: 67534
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTREFQHISRSQFVLTYGPGSVIETKKGPRIIPSLEKGLGENFNPDTFRRFEIAETRISK CCCHHHHCCCCCEEEEECCCCEEECCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHH YIKSRSEEKINIRILALPTNAGLGKQSNYRVYSTYVFPVWKVCYGRRGNHAPILYNGSKC HHHCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHHCCCCCCCCEEECCCCC PLCETNDESSAVRFVAACPDGHLDEVNWNYAVHKNSSCKPDYFRWKANGSSLEDIIIECP CCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCHHHHEEECC ICRARNNMKEIYKMNFFCKGRIPERESPSSDYFPIYTKPDRSKNCEKMMKIMQRQSTSLR CHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCEE VSETMTLLTIPEFDNQISRILQRYDVSIALDTMMKMPSDILLRMDANTVIDWISSSLKGR EECEEEEEECCCHHHHHHHHHHHHCCHHEEHHHHHCCCHHEEEECHHHHHHHHHHHHCCC IPDDSLEVISKEIREKGVLEFCDLYKRLNDESKSFMSLMYEEFDSLLSGAGSSTKNFVMG CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECC HPKKIISTSPLIPELLVHPISKIRTITVQLGYRRIVPTADESEPQLLVSSGVYLPSDGSI CCHHHHCCCCCHHHHHHHHHHHHEEEEEEECCEEECCCCCCCCCCEEEECCEEECCCCCE WYPGYEGFGEGIFITFGERKIPDLTSKLAYNLWKEYTDSGMKSDSGWSEVSVEPEFVWLH ECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEHH TLSHAVIRALSSHTGYSAVSLRERIYISRDGKNGGILIYNTSPGEDGGMGGLVGSVDIFH HHHHHHHHHHHCCCCCHHEEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHH EIINSAVGNILLCSNDPLCCDATKSADCVNGAACYSCLLISETSCEHRNLWLDRHLLIGD HHHHHHHCCEEEECCCCCEECCCCCCCCCCHHHHHEEEEEECCCCCCCCEEEECEEECCC >Mature Secondary Structure TREFQHISRSQFVLTYGPGSVIETKKGPRIIPSLEKGLGENFNPDTFRRFEIAETRISK CCHHHHCCCCCEEEEECCCCEEECCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHH YIKSRSEEKINIRILALPTNAGLGKQSNYRVYSTYVFPVWKVCYGRRGNHAPILYNGSKC HHHCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHHCCCCCCCCEEECCCCC PLCETNDESSAVRFVAACPDGHLDEVNWNYAVHKNSSCKPDYFRWKANGSSLEDIIIECP CCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCHHHHEEECC ICRARNNMKEIYKMNFFCKGRIPERESPSSDYFPIYTKPDRSKNCEKMMKIMQRQSTSLR CHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCEE VSETMTLLTIPEFDNQISRILQRYDVSIALDTMMKMPSDILLRMDANTVIDWISSSLKGR EECEEEEEECCCHHHHHHHHHHHHCCHHEEHHHHHCCCHHEEEECHHHHHHHHHHHHCCC IPDDSLEVISKEIREKGVLEFCDLYKRLNDESKSFMSLMYEEFDSLLSGAGSSTKNFVMG CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECC HPKKIISTSPLIPELLVHPISKIRTITVQLGYRRIVPTADESEPQLLVSSGVYLPSDGSI CCHHHHCCCCCHHHHHHHHHHHHEEEEEEECCEEECCCCCCCCCCEEEECCEEECCCCCE WYPGYEGFGEGIFITFGERKIPDLTSKLAYNLWKEYTDSGMKSDSGWSEVSVEPEFVWLH ECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEHH TLSHAVIRALSSHTGYSAVSLRERIYISRDGKNGGILIYNTSPGEDGGMGGLVGSVDIFH HHHHHHHHHHHCCCCCHHEEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHH EIINSAVGNILLCSNDPLCCDATKSADCVNGAACYSCLLISETSCEHRNLWLDRHLLIGD HHHHHHHCCEEEECCCCCEECCCCCCCCCCHHHHHEEEEEECCCCCCCCEEEECEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA