Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226373
Identifier: 21226373
GI number: 21226373
Start: 361367
End: 361657
Strand: Reverse
Name: 21226373
Synonym: MM_0271
Alternate gene names: NA
Gene position: 361657-361367 (Counterclockwise)
Preceding gene: 21226375
Following gene: 21226372
Centisome position: 8.83
GC content: 43.3
Gene sequence:
>291_bases ATGACTCTCACTGTGGACATAAAAGGTGACTTCACGCCCCAGGAAGTAAGTGAAGTCATTCGGGCAGCGCTGGAGCAGAA TGAGCGCGTTGCAAAATACAAAATAAAGAAGTATTCGGATATTTGTGGGAATTTTGAGGACAAATACGGGATGAGTTCCG AGCTTTTTATGGAAAAATTCGACTCAGGCGACCTTGGAGATGACGAAGACTTTTTCAACTGGTATGCGGCAAAAAGGGGA CTTGATATCTGGAATAAAAAACTTGAGATCATCTCAGGGATCCGGATATGA
Upstream 100 bases:
>100_bases GATCAGACTCCTCAAATCCTGTTTTTTTTCAACTAACAGGAAGTTCCTCTGAATCACCTTATTATAAAATGAAGCATAAT TTCTATTCGGTGAAAGGGAT
Downstream 100 bases:
>100_bases ATTTCAGGGACTATTACTTGAAAATTGAATCCTTGCTTAAAGAGTATTCCCTGATCACTCATTTTTCTGTTGATTTTGAA GAGATCACTGCTGATGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MTLTVDIKGDFTPQEVSEVIRAALEQNERVAKYKIKKYSDICGNFEDKYGMSSELFMEKFDSGDLGDDEDFFNWYAAKRG LDIWNKKLEIISGIRI
Sequences:
>Translated_96_residues MTLTVDIKGDFTPQEVSEVIRAALEQNERVAKYKIKKYSDICGNFEDKYGMSSELFMEKFDSGDLGDDEDFFNWYAAKRG LDIWNKKLEIISGIRI >Mature_95_residues TLTVDIKGDFTPQEVSEVIRAALEQNERVAKYKIKKYSDICGNFEDKYGMSSELFMEKFDSGDLGDDEDFFNWYAAKRGL DIWNKKLEIISGIRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11127; Mature: 10995
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTVDIKGDFTPQEVSEVIRAALEQNERVAKYKIKKYSDICGNFEDKYGMSSELFMEKF CEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHC DSGDLGDDEDFFNWYAAKRGLDIWNKKLEIISGIRI CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCC >Mature Secondary Structure TLTVDIKGDFTPQEVSEVIRAALEQNERVAKYKIKKYSDICGNFEDKYGMSSELFMEKF EEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHC DSGDLGDDEDFFNWYAAKRGLDIWNKKLEIISGIRI CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA