Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226368
Identifier: 21226368
GI number: 21226368
Start: 357394
End: 358194
Strand: Reverse
Name: 21226368
Synonym: MM_0266
Alternate gene names: NA
Gene position: 358194-357394 (Counterclockwise)
Preceding gene: 21226369
Following gene: 21226367
Centisome position: 8.74
GC content: 41.7
Gene sequence:
>801_bases ATGGCTGAGAAAATTAAATTAACGGAACTGGTTTTCCTGTCTGAAAAAAGGAAGAAACTTCTTCTTTTTCTTAAAGATAA GCCGAGGACCATGGCTGAAATTCAGGAACACCTTTCTTCAGTCCCTGTTTCAATCCTTCCCCAGGTCAAGAAGTTAAAAG AAGGCAAGCTTGTAGTACAGAAAGGGCATGCCTACGAGCTCACTTTATTGGGGATGATAATCGCTGATAAAATGCCTCCA TTTCTGGATACCCTGGACGTTCTGGAACAGAATTTCGATTACTGGGCAAAAAGGGACCTTGAAGGGATACCTCCTTTTTT AAGCAAAAGAATTTTTGAACTGAAGGGCTGTAAACTCATCGTTCCGGACGTAAGCCATATGTTCGAGCTCAGTCCTGAAT TTGTAGATAGGCTTCACATATCCACACATATTCTGGGTTTTTCTTCTTATTTTCACCCTTCATTTACCACACTCTACCCT GAAATTGCAAAAAAAGGAGTAGAGATCTCTTTAATACTTGCGGACCCTGTGATTCAGAGGTTCAAAAAGGATTATGGGGA AGAGTTGCTTACCCTTATGAATTTCGAAAACGTCAGTATATTTGCCTTCCACGGGGACGCCAGGATTGCAGATTTCACAG TAACGGACACGTTTTTCCTGATTACTCTTTTTTCCAGGGATAAATATTTTGAACACGAAAGCCTGATGAGCATTGAACCT GAAGCCCTTAAATGGGGCACCGACCTTTTCTCACATATGCTGAAAGAAGCAACCCGGGCAACGGATGTTCAGGTCTTATG A
Upstream 100 bases:
>100_bases TCGTTTTTCCGGTGTACAGTAAAAGTGTGTAAATTTAACGATACTGTTAAATAGTTAAGTCTCTATCCTTTTACATCTAA ATTTTTTTGACGGTGTTCTG
Downstream 100 bases:
>100_bases ACCGGAGTTTTAAATGTATTTTTTACTCCTGTAAATCATTTTCCTCGGTTTTCTGTCAATAACCTTCCCTGTTTTTTCTT TCCTGTTTTTCCTTTCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MAEKIKLTELVFLSEKRKKLLLFLKDKPRTMAEIQEHLSSVPVSILPQVKKLKEGKLVVQKGHAYELTLLGMIIADKMPP FLDTLDVLEQNFDYWAKRDLEGIPPFLSKRIFELKGCKLIVPDVSHMFELSPEFVDRLHISTHILGFSSYFHPSFTTLYP EIAKKGVEISLILADPVIQRFKKDYGEELLTLMNFENVSIFAFHGDARIADFTVTDTFFLITLFSRDKYFEHESLMSIEP EALKWGTDLFSHMLKEATRATDVQVL
Sequences:
>Translated_266_residues MAEKIKLTELVFLSEKRKKLLLFLKDKPRTMAEIQEHLSSVPVSILPQVKKLKEGKLVVQKGHAYELTLLGMIIADKMPP FLDTLDVLEQNFDYWAKRDLEGIPPFLSKRIFELKGCKLIVPDVSHMFELSPEFVDRLHISTHILGFSSYFHPSFTTLYP EIAKKGVEISLILADPVIQRFKKDYGEELLTLMNFENVSIFAFHGDARIADFTVTDTFFLITLFSRDKYFEHESLMSIEP EALKWGTDLFSHMLKEATRATDVQVL >Mature_265_residues AEKIKLTELVFLSEKRKKLLLFLKDKPRTMAEIQEHLSSVPVSILPQVKKLKEGKLVVQKGHAYELTLLGMIIADKMPPF LDTLDVLEQNFDYWAKRDLEGIPPFLSKRIFELKGCKLIVPDVSHMFELSPEFVDRLHISTHILGFSSYFHPSFTTLYPE IAKKGVEISLILADPVIQRFKKDYGEELLTLMNFENVSIFAFHGDARIADFTVTDTFFLITLFSRDKYFEHESLMSIEPE ALKWGTDLFSHMLKEATRATDVQVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30686; Mature: 30555
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEKIKLTELVFLSEKRKKLLLFLKDKPRTMAEIQEHLSSVPVSILPQVKKLKEGKLVVQ CCCCEEHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEE KGHAYELTLLGMIIADKMPPFLDTLDVLEQNFDYWAKRDLEGIPPFLSKRIFELKGCKLI CCCEEEHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHCCCEEE VPDVSHMFELSPEFVDRLHISTHILGFSSYFHPSFTTLYPEIAKKGVEISLILADPVIQR CCCHHHHHHCCHHHHHHHHHHHHEEEHHHHCCCCHHHHHHHHHHCCCEEEEEECCHHHHH FKKDYGEELLTLMNFENVSIFAFHGDARIADFTVTDTFFLITLFSRDKYFEHESLMSIEP HHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEHHHEEEHHHHHCCCCCCCHHHCCCCH EALKWGTDLFSHMLKEATRATDVQVL HHHHHHHHHHHHHHHHHHHCCCEEEC >Mature Secondary Structure AEKIKLTELVFLSEKRKKLLLFLKDKPRTMAEIQEHLSSVPVSILPQVKKLKEGKLVVQ CCCEEHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEE KGHAYELTLLGMIIADKMPPFLDTLDVLEQNFDYWAKRDLEGIPPFLSKRIFELKGCKLI CCCEEEHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHCCCEEE VPDVSHMFELSPEFVDRLHISTHILGFSSYFHPSFTTLYPEIAKKGVEISLILADPVIQR CCCHHHHHHCCHHHHHHHHHHHHEEEHHHHCCCCHHHHHHHHHHCCCEEEEEECCHHHHH FKKDYGEELLTLMNFENVSIFAFHGDARIADFTVTDTFFLITLFSRDKYFEHESLMSIEP HHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEHHHEEEHHHHHCCCCCCCHHHCCCCH EALKWGTDLFSHMLKEATRATDVQVL HHHHHHHHHHHHHHHHHHHCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA