Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is yegE [C]
Identifier: 21226362
GI number: 21226362
Start: 348362
End: 350185
Strand: Direct
Name: yegE [C]
Synonym: MM_0260
Alternate gene names: 21226362
Gene position: 348362-350185 (Clockwise)
Preceding gene: 21226360
Following gene: 21226363
Centisome position: 8.5
GC content: 44.13
Gene sequence:
>1824_bases TTGAAAACATCTGTAAGTAAATCATTTAGAACCTCTTTGCCAGGCGGCTGGAAGAAGATGAACGATAAGAATGCAGGATA TGAAGAAAAAAAGAACAGGTATCCCGATTCAGCAGATGTTGCAGGCGGCGAAAGGGGGAAAGCCTTCCATGCAGCCCTGG AGAGGGAAGAGGCTCTGAAAACGATAATCAATAACAGTCAGGTAGTGGTATTTCTCTGGAAAAACGAGGAAAAATGGCCT GCAGAGTTTGTTTCCGAAAATGTGGTGAACTTCGGATATACCGTGGAGGATTTTATCTCGGGCAGGGTACTGTACGGAGA CATCATATACCCCGAAGACCTGAATAAAGTTGGTGAGGAGCTTCAAAAAAGGATTCTGATGGGAGCTCCGGACTTCAGCA TGGAGTACAGGATTTTTTCAAAAGCCGGGAAAATACGCTGGGTGAATGAAAGGAGCTTTATTGAAAGAGACCAGGAAGGA AAAGTAACCCACTTTCAGGGTGTTGTACTCGATATCACAGAGAGGAAAAGAAGTGAAGAAAAACTGAAAAAAGCCCTGGA AATGCAGAAAGTGCTAACTGCGGTAATCAACAACAGTCCTGCAGTGGTCTTCCTCTGGAAAAATGAAAAATACTGGCCTG CAACTTTTGTCTCTGATAATATTGTACAGTTCGGATACACAGCCAGCGATTTCATATCGCAGGGTATCCTTTACGGGAAA ATAATACATCCCGATGACCTGAAAAGGGTTGAAGGAGAGCTTGAGAGGCATATCCAGAAAGGGGAAGTAAGCTTCAATTC CGAATACAGAATTTTAACAAAAGCCGGAGACCTTCGCTGGGTTAACGAGAAGACTTTCATTCAGAGGGACGGAAACGGGA GTGTTACCTGCTTTCAGGGAATAGTGCTGGATATAACCCCCAGGAAAAAAATTGAAGAAGCTCTGAGAAAATCCCTGGAA ATGCAGAAGCTTCTGAAAACGATAGTCAATAAAAGTTCAGCAGTAGCTTTTCTCTGGAAGAATACGGAAAACTGGCCTGT GGAGTTCGTTTCGGAAAATATAACACAGTTTGGATACAGTGTGGAAGACTTCACTTCGGGAAAGATCCTCTATGGAGATA TAATTTACAAAGAAGATATCAATTCGGTCTTTGAAAGCCTTGCACGCGCTGTCAGGGAAGAGTTAGACTCTTTTGAAATG GAATACCGGATTCTTACAGGAGACAGAAATGTTCGCTGGGTTGAAGAAAGGACATACATCCAGCGGGACAATAAAAACAC TGTTACTCACTTCCAAGGAATAGTCGTTGACGTCACGGAGAGAAAAGAAGCCCGGGAAATGCTAGAGATTCAGAGAGAAC TCAGCATAGCCCTGAGCAGCACCTGGAACCTCCAGGCTATGCTTAACCTTATTCTTGATTCCTGCCTGAAGATAAGGGAG ATAGATGCAGGGGGCATATATCTTAAAGACGAGCTTCTTGACCAGATCAACCTAGTAGCACACAGGGGGCTTTCTTCTGA CTTTGTAGAAAAAATTTATGCATACAGGGCGGACTCTCCGGAAGCAAAGCAGGTCTGGACTGAGAAGCCGGTATATAAAC TGAGCTTTTTTGCGGAAGAGATGGCAGGCATGTTAAGGAAAGAAAAGATCACTGCAGTCGCAGTAATCCCTATGAAACAC AGGGGCGAGGTAATAGGCAGCCTGAATTTTGCCTCCCATACTGTGGACAGGATTCCGCATAATGTCCGCAATTTCCTTGA AAGCATCGCCCTGCAGGTTGTAAACTATATAGCCCCTATACGGATAGAGGCAGACTTTATATGA
Upstream 100 bases:
>100_bases TTATATAAAAAAGGCGAATAGGAAACCAGGAGCTGACCTGCAGACATGCAAACCTGTGAATCAGGACACATGCGGATTTG CAGTCAGGCAGTCTGCTGCT
Downstream 100 bases:
>100_bases TAACCTCCAGCGAAAACTGAACCTTATTAAGATGACGAAATCCTTATTTAAAACAAATTTTATAAATAATGTCGAATTGG GGAGCGAGAAAGCCAGGGTT
Product: putative sensory transduction protein kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 607; Mature: 607
Protein sequence:
>607_residues MKTSVSKSFRTSLPGGWKKMNDKNAGYEEKKNRYPDSADVAGGERGKAFHAALEREEALKTIINNSQVVVFLWKNEEKWP AEFVSENVVNFGYTVEDFISGRVLYGDIIYPEDLNKVGEELQKRILMGAPDFSMEYRIFSKAGKIRWVNERSFIERDQEG KVTHFQGVVLDITERKRSEEKLKKALEMQKVLTAVINNSPAVVFLWKNEKYWPATFVSDNIVQFGYTASDFISQGILYGK IIHPDDLKRVEGELERHIQKGEVSFNSEYRILTKAGDLRWVNEKTFIQRDGNGSVTCFQGIVLDITPRKKIEEALRKSLE MQKLLKTIVNKSSAVAFLWKNTENWPVEFVSENITQFGYSVEDFTSGKILYGDIIYKEDINSVFESLARAVREELDSFEM EYRILTGDRNVRWVEERTYIQRDNKNTVTHFQGIVVDVTERKEAREMLEIQRELSIALSSTWNLQAMLNLILDSCLKIRE IDAGGIYLKDELLDQINLVAHRGLSSDFVEKIYAYRADSPEAKQVWTEKPVYKLSFFAEEMAGMLRKEKITAVAVIPMKH RGEVIGSLNFASHTVDRIPHNVRNFLESIALQVVNYIAPIRIEADFI
Sequences:
>Translated_607_residues MKTSVSKSFRTSLPGGWKKMNDKNAGYEEKKNRYPDSADVAGGERGKAFHAALEREEALKTIINNSQVVVFLWKNEEKWP AEFVSENVVNFGYTVEDFISGRVLYGDIIYPEDLNKVGEELQKRILMGAPDFSMEYRIFSKAGKIRWVNERSFIERDQEG KVTHFQGVVLDITERKRSEEKLKKALEMQKVLTAVINNSPAVVFLWKNEKYWPATFVSDNIVQFGYTASDFISQGILYGK IIHPDDLKRVEGELERHIQKGEVSFNSEYRILTKAGDLRWVNEKTFIQRDGNGSVTCFQGIVLDITPRKKIEEALRKSLE MQKLLKTIVNKSSAVAFLWKNTENWPVEFVSENITQFGYSVEDFTSGKILYGDIIYKEDINSVFESLARAVREELDSFEM EYRILTGDRNVRWVEERTYIQRDNKNTVTHFQGIVVDVTERKEAREMLEIQRELSIALSSTWNLQAMLNLILDSCLKIRE IDAGGIYLKDELLDQINLVAHRGLSSDFVEKIYAYRADSPEAKQVWTEKPVYKLSFFAEEMAGMLRKEKITAVAVIPMKH RGEVIGSLNFASHTVDRIPHNVRNFLESIALQVVNYIAPIRIEADFI >Mature_607_residues MKTSVSKSFRTSLPGGWKKMNDKNAGYEEKKNRYPDSADVAGGERGKAFHAALEREEALKTIINNSQVVVFLWKNEEKWP AEFVSENVVNFGYTVEDFISGRVLYGDIIYPEDLNKVGEELQKRILMGAPDFSMEYRIFSKAGKIRWVNERSFIERDQEG KVTHFQGVVLDITERKRSEEKLKKALEMQKVLTAVINNSPAVVFLWKNEKYWPATFVSDNIVQFGYTASDFISQGILYGK IIHPDDLKRVEGELERHIQKGEVSFNSEYRILTKAGDLRWVNEKTFIQRDGNGSVTCFQGIVLDITPRKKIEEALRKSLE MQKLLKTIVNKSSAVAFLWKNTENWPVEFVSENITQFGYSVEDFTSGKILYGDIIYKEDINSVFESLARAVREELDSFEM EYRILTGDRNVRWVEERTYIQRDNKNTVTHFQGIVVDVTERKEAREMLEIQRELSIALSSTWNLQAMLNLILDSCLKIRE IDAGGIYLKDELLDQINLVAHRGLSSDFVEKIYAYRADSPEAKQVWTEKPVYKLSFFAEEMAGMLRKEKITAVAVIPMKH RGEVIGSLNFASHTVDRIPHNVRNFLESIALQVVNYIAPIRIEADFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR000160 - InterPro: IPR001633 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013656 - InterPro: IPR013655 [H]
Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF08447 PAS_3; PF08448 PAS_4 [H]
EC number: NA
Molecular weight: Translated: 69924; Mature: 69924
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS50112 PAS ; PS50113 PAC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSVSKSFRTSLPGGWKKMNDKNAGYEEKKNRYPDSADVAGGERGKAFHAALEREEALK CCCCCCCHHHHCCCCCHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH TIINNSQVVVFLWKNEEKWPAEFVSENVVNFGYTVEDFISGRVLYGDIIYPEDLNKVGEE HHHCCCEEEEEEECCCCCCCHHHHHCCHHHCCCCHHHHHCCEEEEECEECCHHHHHHHHH LQKRILMGAPDFSMEYRIFSKAGKIRWVNERSFIERDQEGKVTHFQGVVLDITERKRSEE HHHHHCCCCCCCCEEEEEEECCCCEEEECCHHHHCCCCCCCEEEECCEEEEEHHHHHHHH KLKKALEMQKVLTAVINNSPAVVFLWKNEKYWPATFVSDNIVQFGYTASDFISQGILYGK HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCCCCCCCCCHHHHHHCCCCEEE IIHPDDLKRVEGELERHIQKGEVSFNSEYRILTKAGDLRWVNEKTFIQRDGNGSVTCFQG EECCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEECCCEEEEECCCCCEEEEEC IVLDITPRKKIEEALRKSLEMQKLLKTIVNKSSAVAFLWKNTENWPVEFVSENITQFGYS EEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHCCC VEDFTSGKILYGDIIYKEDINSVFESLARAVREELDSFEMEYRILTGDRNVRWVEERTYI HHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEEHHHHHH QRDNKNTVTHFQGIVVDVTERKEAREMLEIQRELSIALSSTWNLQAMLNLILDSCLKIRE HCCCCCCEEEECEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEE IDAGGIYLKDELLDQINLVAHRGLSSDFVEKIYAYRADSPEAKQVWTEKPVYKLSFFAEE CCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHH MAGMLRKEKITAVAVIPMKHRGEVIGSLNFASHTVDRIPHNVRNFLESIALQVVNYIAPI HHHHHHHHCEEEEEEEECCCCCCEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCE RIEADFI EEEECCC >Mature Secondary Structure MKTSVSKSFRTSLPGGWKKMNDKNAGYEEKKNRYPDSADVAGGERGKAFHAALEREEALK CCCCCCCHHHHCCCCCHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH TIINNSQVVVFLWKNEEKWPAEFVSENVVNFGYTVEDFISGRVLYGDIIYPEDLNKVGEE HHHCCCEEEEEEECCCCCCCHHHHHCCHHHCCCCHHHHHCCEEEEECEECCHHHHHHHHH LQKRILMGAPDFSMEYRIFSKAGKIRWVNERSFIERDQEGKVTHFQGVVLDITERKRSEE HHHHHCCCCCCCCEEEEEEECCCCEEEECCHHHHCCCCCCCEEEECCEEEEEHHHHHHHH KLKKALEMQKVLTAVINNSPAVVFLWKNEKYWPATFVSDNIVQFGYTASDFISQGILYGK HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCCCCCCCCCHHHHHHCCCCEEE IIHPDDLKRVEGELERHIQKGEVSFNSEYRILTKAGDLRWVNEKTFIQRDGNGSVTCFQG EECCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEECCCEEEEECCCCCEEEEEC IVLDITPRKKIEEALRKSLEMQKLLKTIVNKSSAVAFLWKNTENWPVEFVSENITQFGYS EEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHCCC VEDFTSGKILYGDIIYKEDINSVFESLARAVREELDSFEMEYRILTGDRNVRWVEERTYI HHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEEHHHHHH QRDNKNTVTHFQGIVVDVTERKEAREMLEIQRELSIALSSTWNLQAMLNLILDSCLKIRE HCCCCCCEEEECEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEE IDAGGIYLKDELLDQINLVAHRGLSSDFVEKIYAYRADSPEAKQVWTEKPVYKLSFFAEE CCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHH MAGMLRKEKITAVAVIPMKHRGEVIGSLNFASHTVDRIPHNVRNFLESIALQVVNYIAPI HHHHHHHHCEEEEEEEECCCCCCEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCE RIEADFI EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]