| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226325
Identifier: 21226325
GI number: 21226325
Start: 304125
End: 304814
Strand: Reverse
Name: 21226325
Synonym: MM_0223
Alternate gene names: NA
Gene position: 304814-304125 (Counterclockwise)
Preceding gene: 21226329
Following gene: 21226324
Centisome position: 7.44
GC content: 48.55
Gene sequence:
>690_bases ATGAAAACCAGAAGTGCATCTATAACTCTTGTTTTACTCCTTACCATAGGGGTTATAACCGCAGTCTCTTTCTCACTCGG CTGTACTGAGCAGGAAGAAACTCCTGCTGAGCCTTCAGATAATACTCCCGTTGAACCTGTAGAAAGCGCTCCAGCTGAAC CTGCAGATAATGATTCTGTTGATGCTCCTGCAGAAACCGAAGAGGAAACTTCTGCTGAACCTGTAGAGAACACTCCTGTC GAATCCGCAGGAGTCGTCCCTGAAGAGTCTTCGGGAAGCCCGGAAAGCTCAGGAGTCGATATAGAGGACCTGGAACCAAT TTCTGCTGGCAATATCCAGGATACCGAATGGCAGTGGACCGGTTTCCAGGACTCTGACAGCCCTGATAGCCAGATAAAAG TGCCCAGCCCTGAAGATTATACGCTTTCCTTTTTCGCTGACGGCACATACTATATTAAAGCCGACTGCAACACCGGCAGC GGGACATATTCCCTGGAAGGAAATAGGCTTTTCCTTGACCTGCCGGTAACAACTCTTGTTGACTGCGGTCCTGAGTCCAT GAATGGCGAATATATGTCTCTTTTACCCACTGTAGAGGCAGCAGCCATTGAGGACGGTCAGCTTGTCCTTTACCCCGGAA ATGAAGGTGACAAAATGTTCTTTATTAATGGGGGGAAGGCTGAACGGTAA
Upstream 100 bases:
>100_bases AATTGCAGTTAAAACAAAAGCTTTATTGAAAAGGCACATCTTTCCGTGTAATTAATCCATGTAATTAATACTTTCATGAA ATTAAGTTATGAGGCGTACG
Downstream 100 bases:
>100_bases ATGCTTGATTAAAAATAGACCTGGTTAATTGAGGTTCAGACCTGGTTAATTGAGGCTTAGATCTGGTTAATCAAGCCCCA ATATTTTTGAGCTTCTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MKTRSASITLVLLLTIGVITAVSFSLGCTEQEETPAEPSDNTPVEPVESAPAEPADNDSVDAPAETEEETSAEPVENTPV ESAGVVPEESSGSPESSGVDIEDLEPISAGNIQDTEWQWTGFQDSDSPDSQIKVPSPEDYTLSFFADGTYYIKADCNTGS GTYSLEGNRLFLDLPVTTLVDCGPESMNGEYMSLLPTVEAAAIEDGQLVLYPGNEGDKMFFINGGKAER
Sequences:
>Translated_229_residues MKTRSASITLVLLLTIGVITAVSFSLGCTEQEETPAEPSDNTPVEPVESAPAEPADNDSVDAPAETEEETSAEPVENTPV ESAGVVPEESSGSPESSGVDIEDLEPISAGNIQDTEWQWTGFQDSDSPDSQIKVPSPEDYTLSFFADGTYYIKADCNTGS GTYSLEGNRLFLDLPVTTLVDCGPESMNGEYMSLLPTVEAAAIEDGQLVLYPGNEGDKMFFINGGKAER >Mature_229_residues MKTRSASITLVLLLTIGVITAVSFSLGCTEQEETPAEPSDNTPVEPVESAPAEPADNDSVDAPAETEEETSAEPVENTPV ESAGVVPEESSGSPESSGVDIEDLEPISAGNIQDTEWQWTGFQDSDSPDSQIKVPSPEDYTLSFFADGTYYIKADCNTGS GTYSLEGNRLFLDLPVTTLVDCGPESMNGEYMSLLPTVEAAAIEDGQLVLYPGNEGDKMFFINGGKAER
Specific function: Unknown
COG id: COG3187
COG function: function code O; Heat shock protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24330; Mature: 24330
Theoretical pI: Translated: 3.39; Mature: 3.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRSASITLVLLLTIGVITAVSFSLGCTEQEETPAEPSDNTPVEPVESAPAEPADNDSV CCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC DAPAETEEETSAEPVENTPVESAGVVPEESSGSPESSGVDIEDLEPISAGNIQDTEWQWT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEC GFQDSDSPDSQIKVPSPEDYTLSFFADGTYYIKADCNTGSGTYSLEGNRLFLDLPVTTLV CCCCCCCCCCEEECCCCCCEEEEEEECCEEEEEEECCCCCCEEEECCCEEEEEECHHHEE DCGPESMNGEYMSLLPTVEAAAIEDGQLVLYPGNEGDKMFFINGGKAER ECCCCCCCCCEEEEECCCEEEEECCCEEEEEECCCCCEEEEEECCCCCC >Mature Secondary Structure MKTRSASITLVLLLTIGVITAVSFSLGCTEQEETPAEPSDNTPVEPVESAPAEPADNDSV CCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC DAPAETEEETSAEPVENTPVESAGVVPEESSGSPESSGVDIEDLEPISAGNIQDTEWQWT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEC GFQDSDSPDSQIKVPSPEDYTLSFFADGTYYIKADCNTGSGTYSLEGNRLFLDLPVTTLV CCCCCCCCCCEEECCCCCCEEEEEEECCEEEEEEECCCCCCEEEECCCEEEEEECHHHEE DCGPESMNGEYMSLLPTVEAAAIEDGQLVLYPGNEGDKMFFINGGKAER ECCCCCCCCCEEEEECCCEEEEECCCEEEEEECCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA