Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226321
Identifier: 21226321
GI number: 21226321
Start: 298722
End: 299855
Strand: Direct
Name: 21226321
Synonym: MM_0219
Alternate gene names: NA
Gene position: 298722-299855 (Clockwise)
Preceding gene: 21226313
Following gene: 21226326
Centisome position: 7.29
GC content: 41.27
Gene sequence:
>1134_bases ATGAAATATACCTTTCAGGACTCAACGGAATTTCCCGTTCAGAGAGACTTTATTCAGGATATTCAGGACTTTATACGGAT TTCTAAAGAAGTAATCCCTCTTGAAAAGTCAATTAAAGAGATAAAACAGGTAAATATCGAAGAGACGGGGACTACTCAGG CGGGAATTGAAGAAATAGACAGGTTCCAGAAAGAAATCACTGAGTGTATAGAAGAACGTGCACTGGGATATGAATCCAGA GAAGTTCTTGAGATAAAATCCAAGACAATAGAGACCTGTGCGAACATATCGCTGTTGAAAAAGAATGAAAAACTTGAAGA TATAGACAAACAGAACAGGCTGGCACTTATAGAAGTACGGCAGCTGGAAGACAGGATACTTACAGCTCTCAGCCCTTTTT TTGAAAATAGCATTTATGGCGCCGAACACACCTGTTATGCTTCAAGCGAAGACAGGAAGCTTAAAGGGTGGCAGGTAAGC TCTATCGACGGCATGAGGTACGAATTTGAACTGAGTTTTATACAGGATACACTGAAAGTTGAAGACCTCCTGAAACTTAC TCTGCCCGTGCGGTCAAAAAGCGGATTCCTCTCAAAAGAAGAAAAGGTAAAAAAGCTGGACGTGTCAGGTTTCTACGTTA CCAATATCGAGCACGGAAAAAATACTACGAGAACTGTTATAGAAGATAAGGATGCGGAAAACCGGTTCATAATTACTTCA GATGGCGGGACATTTCTGATAATGTATGGAGACAACGAAATAACAGGCGATGAAAAGCTGGCTCCCGCTCTGGATAAAGA TTCCATTTCCATATTTGTGGAAAAAATTAAAGATTTCGTAACAGACTCAGTGGTTTTCAGAAAGCTCAGGCTGATCCTTA TAGACGGCAAAAATGCTGTTGAAGAGAATGTTATTTTTGACTGCCTTAAGATTATAGCCGGCATATACGGAAAGCTCGCA AAGGAATGCATTGAGAGAGGATACACGGAAGGGGAAATAACGATTAAAATAGAGGAGCCGGGAAGTATCCGGACAGAAAA ATACATTTCAAAGTCCGAAGCTTCGAGCGAACTATCATCCATAGGACCTGAAGGAAACGAGCTTGCCCGCATCCTCAGAG TCAGCGAAGCTTAA
Upstream 100 bases:
>100_bases TAAGTGGGTAATTCTTCCATCCCAGGGTATATGCTCACAAATTTAAACATAAAAAACATAGTTTTCTAAAAAGCAATTTT TCCAAAGGGGAGGATTTGAA
Downstream 100 bases:
>100_bases AAGATTTTCCAGATATTAGTTTGAAAAGTTTTGAAAATCATCAGATAGGATAAGACCTGAGTAATCAGGATTTAAATAAC TTTAATATGGACTCCCTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MKYTFQDSTEFPVQRDFIQDIQDFIRISKEVIPLEKSIKEIKQVNIEETGTTQAGIEEIDRFQKEITECIEERALGYESR EVLEIKSKTIETCANISLLKKNEKLEDIDKQNRLALIEVRQLEDRILTALSPFFENSIYGAEHTCYASSEDRKLKGWQVS SIDGMRYEFELSFIQDTLKVEDLLKLTLPVRSKSGFLSKEEKVKKLDVSGFYVTNIEHGKNTTRTVIEDKDAENRFIITS DGGTFLIMYGDNEITGDEKLAPALDKDSISIFVEKIKDFVTDSVVFRKLRLILIDGKNAVEENVIFDCLKIIAGIYGKLA KECIERGYTEGEITIKIEEPGSIRTEKYISKSEASSELSSIGPEGNELARILRVSEA
Sequences:
>Translated_377_residues MKYTFQDSTEFPVQRDFIQDIQDFIRISKEVIPLEKSIKEIKQVNIEETGTTQAGIEEIDRFQKEITECIEERALGYESR EVLEIKSKTIETCANISLLKKNEKLEDIDKQNRLALIEVRQLEDRILTALSPFFENSIYGAEHTCYASSEDRKLKGWQVS SIDGMRYEFELSFIQDTLKVEDLLKLTLPVRSKSGFLSKEEKVKKLDVSGFYVTNIEHGKNTTRTVIEDKDAENRFIITS DGGTFLIMYGDNEITGDEKLAPALDKDSISIFVEKIKDFVTDSVVFRKLRLILIDGKNAVEENVIFDCLKIIAGIYGKLA KECIERGYTEGEITIKIEEPGSIRTEKYISKSEASSELSSIGPEGNELARILRVSEA >Mature_377_residues MKYTFQDSTEFPVQRDFIQDIQDFIRISKEVIPLEKSIKEIKQVNIEETGTTQAGIEEIDRFQKEITECIEERALGYESR EVLEIKSKTIETCANISLLKKNEKLEDIDKQNRLALIEVRQLEDRILTALSPFFENSIYGAEHTCYASSEDRKLKGWQVS SIDGMRYEFELSFIQDTLKVEDLLKLTLPVRSKSGFLSKEEKVKKLDVSGFYVTNIEHGKNTTRTVIEDKDAENRFIITS DGGTFLIMYGDNEITGDEKLAPALDKDSISIFVEKIKDFVTDSVVFRKLRLILIDGKNAVEENVIFDCLKIIAGIYGKLA KECIERGYTEGEITIKIEEPGSIRTEKYISKSEASSELSSIGPEGNELARILRVSEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42950; Mature: 42950
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYTFQDSTEFPVQRDFIQDIQDFIRISKEVIPLEKSIKEIKQVNIEETGTTQAGIEEID CCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHH RFQKEITECIEERALGYESREVLEIKSKTIETCANISLLKKNEKLEDIDKQNRLALIEVR HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHCCCCHHHHCCCCCEEEEHHH QLEDRILTALSPFFENSIYGAEHTCYASSEDRKLKGWQVSSIDGMRYEFELSFIQDTLKV HHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEECCCCCEEEEEHHHHHHHHHH EDLLKLTLPVRSKSGFLSKEEKVKKLDVSGFYVTNIEHGKNTTRTVIEDKDAENRFIITS HHHHHHHCCCCCCCCCCCHHHHHHEECCCCEEEEEEECCCCCCCCEEECCCCCCEEEEEE DGGTFLIMYGDNEITGDEKLAPALDKDSISIFVEKIKDFVTDSVVFRKLRLILIDGKNAV CCCEEEEEECCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHH EENVIFDCLKIIAGIYGKLAKECIERGYTEGEITIKIEEPGSIRTEKYISKSEASSELSS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH IGPEGNELARILRVSEA CCCCHHHHHHHHHHCCC >Mature Secondary Structure MKYTFQDSTEFPVQRDFIQDIQDFIRISKEVIPLEKSIKEIKQVNIEETGTTQAGIEEID CCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHH RFQKEITECIEERALGYESREVLEIKSKTIETCANISLLKKNEKLEDIDKQNRLALIEVR HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHCCCCHHHHCCCCCEEEEHHH QLEDRILTALSPFFENSIYGAEHTCYASSEDRKLKGWQVSSIDGMRYEFELSFIQDTLKV HHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEECCCCCEEEEEHHHHHHHHHH EDLLKLTLPVRSKSGFLSKEEKVKKLDVSGFYVTNIEHGKNTTRTVIEDKDAENRFIITS HHHHHHHCCCCCCCCCCCHHHHHHEECCCCEEEEEEECCCCCCCCEEECCCCCCEEEEEE DGGTFLIMYGDNEITGDEKLAPALDKDSISIFVEKIKDFVTDSVVFRKLRLILIDGKNAV CCCEEEEEECCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHH EENVIFDCLKIIAGIYGKLAKECIERGYTEGEITIKIEEPGSIRTEKYISKSEASSELSS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH IGPEGNELARILRVSEA CCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA