Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is yhcG [H]
Identifier: 21226305
GI number: 21226305
Start: 278848
End: 279867
Strand: Direct
Name: yhcG [H]
Synonym: MM_0203
Alternate gene names: 21226305
Gene position: 278848-279867 (Clockwise)
Preceding gene: 21226303
Following gene: 21226306
Centisome position: 6.81
GC content: 40.49
Gene sequence:
>1020_bases ATGAAAGGTATTGAAACTTCTGAATATAAGACTCTGTTTGGAGAAATCAAAAATCGAATACTTAAAGGCCAGTACGAGGC TTTAAAGGCAGTAAATAGGGAATTGATCTCAGTTTACTGGGATATTGGAAAGTTGATTGTTGAAAGGCAAAAAAGTGAGA CATGGGGCAAGTCCGTTGTCGACCAGCTTTCAAGAGACCTCCAGGAGGAGTTCCCTAGAGTAAGGGGTTTTTCTGCCTCA AATATCTGGCGCATGAGGATGTTTTATCTCACATATGCCGACAATCAAAAACTCGCACCATTGGTGCGAGAAATCGGATG GACTCACAATATAGCAATTATGGAAAAGTGTAAAGATGACCTTGAACGCGAATTTTATCTTCGTACAACCCGGAAATTCG GGTGGACTAAAAATATTCTGATAGTTCAGATTGAAAACGATACTTACAAAAAGACCCTGCTCAACCAGACGAATTTTGAA ACAACCCTCCCGGCAGAAATTCAATCTAAGGCAAAACTCGCAATTAAGGATGAATATACTTTCGATTTCCTCGAACTCGG AGATCTCCACTCAGAAAAGGAACTCGAAAAGGAAATTCTCTTAAAACTGGAAGCTTTCCTCCGGGAAATGGGTGGAATGT TTACCTTCATAGGCAGTCAGTACCGCATTCAGGTAGAAGATGAAGAATACTTCATCGATCTTCTTCTCTTCCACCGGGCT ATAAACTGCCTCATCGCAGTAGAACTTAAAATTGGCAAATTCCTCCCAGAATACATAGGAAAAATGCAGTTTTATCTGGC CCAGCTAGACGATTTCGTAAAGCAGCCCCACGAAAATCCCTCTATCGGCATCATCCTATGCAAATCCAGAAACAAAACCA TTGTAGAATATGCTCTTCGCGAATCAAACAAGCCCATTGGTGTTGCTGAGTACAAAATTGTTTCTACACTGCCAGAAAAA CTCAAAGGAAAATTACCCTCTCCTGAAGAAATTTCGAAACTTTTGGAGGAAATAAAGTAA
Upstream 100 bases:
>100_bases AAATTAATGAAAATTATGCGTAAAGAATATTTAAGGCTGGGTATACATGTAAAAATAGAAAACTGGAGTTCTTTTTGAGA GCGCTTTCCGGGATGACTAT
Downstream 100 bases:
>100_bases AGAAGCGAGTTTCTCCATTTCAATCAAAATATAATCTTCCACTAAAACCAAAGTAAGAAAATACCGCTAAATTCTCCTCT CCTGCATCCTCAAACCCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MKGIETSEYKTLFGEIKNRILKGQYEALKAVNRELISVYWDIGKLIVERQKSETWGKSVVDQLSRDLQEEFPRVRGFSAS NIWRMRMFYLTYADNQKLAPLVREIGWTHNIAIMEKCKDDLEREFYLRTTRKFGWTKNILIVQIENDTYKKTLLNQTNFE TTLPAEIQSKAKLAIKDEYTFDFLELGDLHSEKELEKEILLKLEAFLREMGGMFTFIGSQYRIQVEDEEYFIDLLLFHRA INCLIAVELKIGKFLPEYIGKMQFYLAQLDDFVKQPHENPSIGIILCKSRNKTIVEYALRESNKPIGVAEYKIVSTLPEK LKGKLPSPEEISKLLEEIK
Sequences:
>Translated_339_residues MKGIETSEYKTLFGEIKNRILKGQYEALKAVNRELISVYWDIGKLIVERQKSETWGKSVVDQLSRDLQEEFPRVRGFSAS NIWRMRMFYLTYADNQKLAPLVREIGWTHNIAIMEKCKDDLEREFYLRTTRKFGWTKNILIVQIENDTYKKTLLNQTNFE TTLPAEIQSKAKLAIKDEYTFDFLELGDLHSEKELEKEILLKLEAFLREMGGMFTFIGSQYRIQVEDEEYFIDLLLFHRA INCLIAVELKIGKFLPEYIGKMQFYLAQLDDFVKQPHENPSIGIILCKSRNKTIVEYALRESNKPIGVAEYKIVSTLPEK LKGKLPSPEEISKLLEEIK >Mature_339_residues MKGIETSEYKTLFGEIKNRILKGQYEALKAVNRELISVYWDIGKLIVERQKSETWGKSVVDQLSRDLQEEFPRVRGFSAS NIWRMRMFYLTYADNQKLAPLVREIGWTHNIAIMEKCKDDLEREFYLRTTRKFGWTKNILIVQIENDTYKKTLLNQTNFE TTLPAEIQSKAKLAIKDEYTFDFLELGDLHSEKELEKEILLKLEAFLREMGGMFTFIGSQYRIQVEDEEYFIDLLLFHRA INCLIAVELKIGKFLPEYIGKMQFYLAQLDDFVKQPHENPSIGIILCKSRNKTIVEYALRESNKPIGVAEYKIVSTLPEK LKGKLPSPEEISKLLEEIK
Specific function: Unknown
COG id: COG4804
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789614, Length=350, Percent_Identity=29.1428571428571, Blast_Score=157, Evalue=9e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009362 [H]
Pfam domain/function: PF06250 DUF1016 [H]
EC number: NA
Molecular weight: Translated: 39734; Mature: 39734
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGIETSEYKTLFGEIKNRILKGQYEALKAVNRELISVYWDIGKLIVERQKSETWGKSVV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DQLSRDLQEEFPRVRGFSASNIWRMRMFYLTYADNQKLAPLVREIGWTHNIAIMEKCKDD HHHHHHHHHHHHHHCCCCCCCHHEEEEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHH LEREFYLRTTRKFGWTKNILIVQIENDTYKKTLLNQTNFETTLPAEIQSKAKLAIKDEYT HHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCCCCCCCCHHHHCCCEEEEECCCC FDFLELGDLHSEKELEKEILLKLEAFLREMGGMFTFIGSQYRIQVEDEEYFIDLLLFHRA CHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEECCHHHHHHHHHHHHH INCLIAVELKIGKFLPEYIGKMQFYLAQLDDFVKQPHENPSIGIILCKSRNKTIVEYALR HHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHH ESNKPIGVAEYKIVSTLPEKLKGKLPSPEEISKLLEEIK HCCCCCCHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MKGIETSEYKTLFGEIKNRILKGQYEALKAVNRELISVYWDIGKLIVERQKSETWGKSVV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DQLSRDLQEEFPRVRGFSASNIWRMRMFYLTYADNQKLAPLVREIGWTHNIAIMEKCKDD HHHHHHHHHHHHHHCCCCCCCHHEEEEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHH LEREFYLRTTRKFGWTKNILIVQIENDTYKKTLLNQTNFETTLPAEIQSKAKLAIKDEYT HHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCCCCCCCCHHHHCCCEEEEECCCC FDFLELGDLHSEKELEKEILLKLEAFLREMGGMFTFIGSQYRIQVEDEEYFIDLLLFHRA CHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEECCHHHHHHHHHHHHH INCLIAVELKIGKFLPEYIGKMQFYLAQLDDFVKQPHENPSIGIILCKSRNKTIVEYALR HHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHH ESNKPIGVAEYKIVSTLPEKLKGKLPSPEEISKLLEEIK HCCCCCCHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]