Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226266
Identifier: 21226266
GI number: 21226266
Start: 212816
End: 214864
Strand: Direct
Name: 21226266
Synonym: MM_0164
Alternate gene names: NA
Gene position: 212816-214864 (Clockwise)
Preceding gene: 21226265
Following gene: 21226268
Centisome position: 5.2
GC content: 44.56
Gene sequence:
>2049_bases ATGACCGAAGAATCTCTTGAGACAGAAAGCCTCGAAACCGACAGAAAACTAATCCAGCATTTCCCCGGCAGAGTTGTGCG AAAAGACCTCACAAAACTGCTGAAGGTCGGGCACAACGTCCCTGTCTATGTACTGGAATACTTGCTTGGCTCTTACTGTG CAGATGATGACGAAGAAGTAATCCAGGAAGGCATCCAGATAGTAAAAAACATCCTGTCCCAGAACTATGTCCGGCCTGAT GAAGCTGAAAAGATCAAGTCAAGGATCCGTGAAACGGGCTACTATACTGTTATTGATAAAATCACTGTCATACTCAACGA AAGGAGAGATATCTACGAAGCTGAGTTCTCCAACCTTGGGCTCAAAAACATTGAAATTGACTCTGATTATGTCATAAAAT ACGACAAGCTTCTAGGCGGTGGAATCTGGTGCATGATCAAGATGGAATACTCAACAGAATCAGCTTCTTCGCCATTCATT ATCTCTAGTTTAAAACCCATCCAGATCCCAAACGTGAATATCCAGGAGATCCTAGCTGAAAGAAAGAACTTCACCAAAGA TGAGTGGATTGACGTTCTGATGAGAAGCATTGGGATGGAGCCTACCCAGCTTGAAACTTCCACAAAGTGGCATATGCTCG AAAGGCTTGTTCCTCTTGTCGAAAATAATTATAACCTCTGCGAACTCGGCCCGAAAAGTACTGGAAAATCTCATGTTTAC AAGGAAATATCCCCAAACACCATCCTGATGTCCGGAGGGCAGACCACAGTTGCAAACCTTTTCTACAACATGGGCACCCG ACAGATAGGGCTTGTTGGGTTCTGGGACGTTGTGGCGTTTGACGAGGTTGCAGGAATCCGTTTCAAAGACAAGGACGGAA TACAGATCCTTAAAGACTATATGGCCTCAGGCTCCTTTGCGAGGGGAAAAGAGCAAAAGAACGCAAACGCTTCCATTGTT TTTGTTGGAAATGTCAACCAGAGTATTGAGTCCTTATTAAAGACTTCACACCTGTTCTCTCCCTTCCCGGAAGCCATGAA CAGCGATACCGCCTTTTTCGACAGGATGCACTATTACCTCCCTGGCTGGGAAATCCCGAAGTTCAGGCCTGAACACTTTA CGGACAGGTATGGATTCATAGTTGACTATATTGCAGAATTCTTCAGGGAAATGAGGAAGAGGTCCTACGCCGACAACATA AACAGATTCTTTAAGCTAGGGAACAACCTGAACCAGCGTGATGTGATCGCCGTTAAAAAGACCTTCTCAGGTCTTATGAA ACTCATTTACCCGGATGAGAATATCACCAGGGAACAGGCGCAGGAGATCCTTGAGTATACCCTCGTTGGAAGAAGGCGCG TGAAAGAGCAGCTTAAAAAAATAGGAGGGATCGAGTTCTTCGATGTCAATTTCTCCTATATTGACAATGAAAACCTGAAA GAATCCTTCGTGTCCGTCCCAGAAAGCGGTGGAAACAAGATTATCCCTGCAGGTATCACAAAACCTGGTGAAGCCTATGC TGTTGGAGCTACCGAATCTGGTAAAATTGGGATTTACAAGTTTGAAGTTCAGGTAGTTGCAGGCTCGGGAAAATATGAAA AATCAGGTACAGGCTCAAATACTCAGACAAAGGAATCCATAAAAACGGCATTCAATTACTTCAAAGCCAATGCAAAATCC ATAAGTCAGAGCATATCTGTAAAAGAAAAGGATTACTTTTTGCACGTCCAGGACCTTTACGGAGTTGGCATGTCAGAAGA ACTTGCCCTTCCAGCCTTCATCAGCCTCTGCTCCGGCGCATTGGAAAGGTCACTTCAGGAACAGACTGCAATTCTAGGGA GTATGACAATCGGCGGCTCTGTAGGTATACTTGAAAATCTTGCTGGTCTTTTGCAGGTCTGCCTCGATGCTGGGGCAAAG AGAGTAATGATTCCAATTTCTTCTGCAGGCAAGATCGCAACAGTGCCGCCGGATCTTTTCAGTAAGTTCCAGATTTCGTT TTATGAGGATCCAATTGATGCAGTGTATAAGTCCATGTCACTGATATAA
Upstream 100 bases:
>100_bases CTGATTGGCGACTTTGATGACTTCTAATTGAAACGTAAATTATGCACAAAAATCAGGGATAAAAAGAGTGTAGGGATATT GTAATAGGGACAGGATAAAA
Downstream 100 bases:
>100_bases TAAATTAATGAAAAATTAAAATGCAAGTTATGTTAATAAATCTAGATGTAAGGAATCGATCATCAGTTTAAATTAATATT ATATCAGTGCTATATTCACA
Product: ATP-dependent protease La
Products: NA
Alternate protein names: ATP-Dependent Protease La; ATP-Dependent Lon-Type Protease; ATP-Dependent Lon-Type Protease-Like Protein; Peptidase; Alkaline Phosphatase Domain-Containing Protein; ATP-Dependent Protease La Lon; Endopeptidase La; ATP-Dependent Lon-Protease
Number of amino acids: Translated: 682; Mature: 681
Protein sequence:
>682_residues MTEESLETESLETDRKLIQHFPGRVVRKDLTKLLKVGHNVPVYVLEYLLGSYCADDDEEVIQEGIQIVKNILSQNYVRPD EAEKIKSRIRETGYYTVIDKITVILNERRDIYEAEFSNLGLKNIEIDSDYVIKYDKLLGGGIWCMIKMEYSTESASSPFI ISSLKPIQIPNVNIQEILAERKNFTKDEWIDVLMRSIGMEPTQLETSTKWHMLERLVPLVENNYNLCELGPKSTGKSHVY KEISPNTILMSGGQTTVANLFYNMGTRQIGLVGFWDVVAFDEVAGIRFKDKDGIQILKDYMASGSFARGKEQKNANASIV FVGNVNQSIESLLKTSHLFSPFPEAMNSDTAFFDRMHYYLPGWEIPKFRPEHFTDRYGFIVDYIAEFFREMRKRSYADNI NRFFKLGNNLNQRDVIAVKKTFSGLMKLIYPDENITREQAQEILEYTLVGRRRVKEQLKKIGGIEFFDVNFSYIDNENLK ESFVSVPESGGNKIIPAGITKPGEAYAVGATESGKIGIYKFEVQVVAGSGKYEKSGTGSNTQTKESIKTAFNYFKANAKS ISQSISVKEKDYFLHVQDLYGVGMSEELALPAFISLCSGALERSLQEQTAILGSMTIGGSVGILENLAGLLQVCLDAGAK RVMIPISSAGKIATVPPDLFSKFQISFYEDPIDAVYKSMSLI
Sequences:
>Translated_682_residues MTEESLETESLETDRKLIQHFPGRVVRKDLTKLLKVGHNVPVYVLEYLLGSYCADDDEEVIQEGIQIVKNILSQNYVRPD EAEKIKSRIRETGYYTVIDKITVILNERRDIYEAEFSNLGLKNIEIDSDYVIKYDKLLGGGIWCMIKMEYSTESASSPFI ISSLKPIQIPNVNIQEILAERKNFTKDEWIDVLMRSIGMEPTQLETSTKWHMLERLVPLVENNYNLCELGPKSTGKSHVY KEISPNTILMSGGQTTVANLFYNMGTRQIGLVGFWDVVAFDEVAGIRFKDKDGIQILKDYMASGSFARGKEQKNANASIV FVGNVNQSIESLLKTSHLFSPFPEAMNSDTAFFDRMHYYLPGWEIPKFRPEHFTDRYGFIVDYIAEFFREMRKRSYADNI NRFFKLGNNLNQRDVIAVKKTFSGLMKLIYPDENITREQAQEILEYTLVGRRRVKEQLKKIGGIEFFDVNFSYIDNENLK ESFVSVPESGGNKIIPAGITKPGEAYAVGATESGKIGIYKFEVQVVAGSGKYEKSGTGSNTQTKESIKTAFNYFKANAKS ISQSISVKEKDYFLHVQDLYGVGMSEELALPAFISLCSGALERSLQEQTAILGSMTIGGSVGILENLAGLLQVCLDAGAK RVMIPISSAGKIATVPPDLFSKFQISFYEDPIDAVYKSMSLI >Mature_681_residues TEESLETESLETDRKLIQHFPGRVVRKDLTKLLKVGHNVPVYVLEYLLGSYCADDDEEVIQEGIQIVKNILSQNYVRPDE AEKIKSRIRETGYYTVIDKITVILNERRDIYEAEFSNLGLKNIEIDSDYVIKYDKLLGGGIWCMIKMEYSTESASSPFII SSLKPIQIPNVNIQEILAERKNFTKDEWIDVLMRSIGMEPTQLETSTKWHMLERLVPLVENNYNLCELGPKSTGKSHVYK EISPNTILMSGGQTTVANLFYNMGTRQIGLVGFWDVVAFDEVAGIRFKDKDGIQILKDYMASGSFARGKEQKNANASIVF VGNVNQSIESLLKTSHLFSPFPEAMNSDTAFFDRMHYYLPGWEIPKFRPEHFTDRYGFIVDYIAEFFREMRKRSYADNIN RFFKLGNNLNQRDVIAVKKTFSGLMKLIYPDENITREQAQEILEYTLVGRRRVKEQLKKIGGIEFFDVNFSYIDNENLKE SFVSVPESGGNKIIPAGITKPGEAYAVGATESGKIGIYKFEVQVVAGSGKYEKSGTGSNTQTKESIKTAFNYFKANAKSI SQSISVKEKDYFLHVQDLYGVGMSEELALPAFISLCSGALERSLQEQTAILGSMTIGGSVGILENLAGLLQVCLDAGAKR VMIPISSAGKIATVPPDLFSKFQISFYEDPIDAVYKSMSLI
Specific function: Unknown
COG id: COG4930
COG function: function code O; Predicted ATP-dependent Lon-type protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.4.21.53
Molecular weight: Translated: 76853; Mature: 76722
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEESLETESLETDRKLIQHFPGRVVRKDLTKLLKVGHNVPVYVLEYLLGSYCADDDEEV CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHH IQEGIQIVKNILSQNYVRPDEAEKIKSRIRETGYYTVIDKITVILNERRDIYEAEFSNLG HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHCCCHHHHHHHHCCC LKNIEIDSDYVIKYDKLLGGGIWCMIKMEYSTESASSPFIISSLKPIQIPNVNIQEILAE CCEEEECCCCEEEEHHHHCCCEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHH RKNFTKDEWIDVLMRSIGMEPTQLETSTKWHMLERLVPLVENNYNLCELGPKSTGKSHVY HHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHH KEISPNTILMSGGQTTVANLFYNMGTRQIGLVGFWDVVAFDEVAGIRFKDKDGIQILKDY HCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHCCCEECCCCCHHHHHHH MASGSFARGKEQKNANASIVFVGNVNQSIESLLKTSHLFSPFPEAMNSDTAFFDRMHYYL HHCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHCC PGWEIPKFRPEHFTDRYGFIVDYIAEFFREMRKRSYADNINRFFKLGNNLNQRDVIAVKK CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH TFSGLMKLIYPDENITREQAQEILEYTLVGRRRVKEQLKKIGGIEFFDVNFSYIDNENLK HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCHH ESFVSVPESGGNKIIPAGITKPGEAYAVGATESGKIGIYKFEVQVVAGSGKYEKSGTGSN HHHHCCCCCCCCEEEECCCCCCCCEEEECCCCCCCEEEEEEEEEEEECCCCCCCCCCCCC TQTKESIKTAFNYFKANAKSISQSISVKEKDYFLHVQDLYGVGMSEELALPAFISLCSGA CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCCCCCHHHHHHHHHHHHHH LERSLQEQTAILGSMTIGGSVGILENLAGLLQVCLDAGAKRVMIPISSAGKIATVPPDLF HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCHHHH SKFQISFYEDPIDAVYKSMSLI HHHHHEECCCHHHHHHHHHCCC >Mature Secondary Structure TEESLETESLETDRKLIQHFPGRVVRKDLTKLLKVGHNVPVYVLEYLLGSYCADDDEEV CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHH IQEGIQIVKNILSQNYVRPDEAEKIKSRIRETGYYTVIDKITVILNERRDIYEAEFSNLG HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHCCCHHHHHHHHCCC LKNIEIDSDYVIKYDKLLGGGIWCMIKMEYSTESASSPFIISSLKPIQIPNVNIQEILAE CCEEEECCCCEEEEHHHHCCCEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHH RKNFTKDEWIDVLMRSIGMEPTQLETSTKWHMLERLVPLVENNYNLCELGPKSTGKSHVY HHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHH KEISPNTILMSGGQTTVANLFYNMGTRQIGLVGFWDVVAFDEVAGIRFKDKDGIQILKDY HCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHCCCEECCCCCHHHHHHH MASGSFARGKEQKNANASIVFVGNVNQSIESLLKTSHLFSPFPEAMNSDTAFFDRMHYYL HHCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHCC PGWEIPKFRPEHFTDRYGFIVDYIAEFFREMRKRSYADNINRFFKLGNNLNQRDVIAVKK CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH TFSGLMKLIYPDENITREQAQEILEYTLVGRRRVKEQLKKIGGIEFFDVNFSYIDNENLK HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCHH ESFVSVPESGGNKIIPAGITKPGEAYAVGATESGKIGIYKFEVQVVAGSGKYEKSGTGSN HHHHCCCCCCCCEEEECCCCCCCCEEEECCCCCCCEEEEEEEEEEEECCCCCCCCCCCCC TQTKESIKTAFNYFKANAKSISQSISVKEKDYFLHVQDLYGVGMSEELALPAFISLCSGA CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCCCCCHHHHHHHHHHHHHH LERSLQEQTAILGSMTIGGSVGILENLAGLLQVCLDAGAKRVMIPISSAGKIATVPPDLF HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCHHHH SKFQISFYEDPIDAVYKSMSLI HHHHHEECCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA