Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226264

Identifier: 21226264

GI number: 21226264

Start: 208431

End: 209816

Strand: Direct

Name: 21226264

Synonym: MM_0162

Alternate gene names: NA

Gene position: 208431-209816 (Clockwise)

Preceding gene: 21226261

Following gene: 21226265

Centisome position: 5.09

GC content: 42.5

Gene sequence:

>1386_bases
ATGCAATTCTACAACCGGCAGAAAGAGCTTAAACTTATGGAACTGCTCGATCAGGGGAAACCATCTTTTTTTGTCATAAC
CGGCAAAAGAAGGGTAGGAAAAACCGAGCTGATCAAGCAGTTCACACGGAACAGGAAAGCGCTGTATCTTTTCGTTGACA
GTAACAAAAGCATTAACATTCTGATGGACGAGTTCGACCGGCTTTTAAAGGAGAAACTGGACCTGCCGGATTACATAAAA
GTCGATGAACCTGAGAATTTCCTCAAATTCATTACCTCTTATGACAGGGACCTGGTAATAGCGATTGATGAATTCCAGAG
GTTCCAGAAAGTCTACCCATCTTTCATTACTCAGCTGCAGCGATACTGGGACATGAAGCCGGACAATTGCAGAATCTTTC
TTATCGTTTCCGGGTCTTCTATTGGCATGATAAGAAAAATCTTCATTGAGGAACAGGCTCCGCTCTTCAAACGTGCCGAT
AATATTCTGACCATAAAGCCCTTTACGGTCCTTGAGACATTTGAGATGCTCGATGGCATGGGTATAAAAAATCCGGAAGA
AAAACTGAATCTATACTTCCTTTTCGGAGGGACGGTGTATTACTATCGCCTGTTTGAAAAGTATCAGTGCACAGGATTTG
ATGATGCCCTTGAAAAGCTGATATTCAGCGAGTTTGCACCGCTTAAAAATGAAGTGAGGGAAATTCTGATAGAGGAATTT
GGGAAGGAGCACTCCACATATTATGAAATAATCTCAGCGATATCACAGGGAAGATGCTCGATGAGCGAGATCTCAGACAT
GACACATGTTTCTTCGAGCTCATTGTCACCTTATTTTTACGATCTCATAGACCTGCTGGGAGTGGTAGAACACCGGATAC
CAGTCATGGACAATCCTGAAAAAAGCAAGAGAGGACGGTATTTTCTTAAGGATAATTTCTTCAGGTTCTATGGTCGCTTC
ATATATCCTATGTACAGCCGGTATATGGCAGGCAATTATTCTCCCATGCTGGAAAAGGTCCGGAAGGAATGGCAGAGTTA
CACAGGCAAGATATTCGAGGACATAGTTCATGAACTGCTGGTTGAAAAGATGATCAGCGATTATCCGGAGCTTGGGAGCT
GGTGGAACCGGAAAGGAGATGAGATTGACATTCTTGGAGTAGATCACCGGGGGAGAAAATCCCTGGTAATTGAAGTCAAG
AATAAAGAACTGGCTGAAAACGAAGCCAGAGAGATTCTGGAATTAACACTCGATAAAACAAAATTAGTAAAAGGAATATC
CGGTCAAAAATTGAAAGTCGGGATAGTGGCTCAAAAGGTCAAAGGTAGAAAGAACCTGGAAGATGATGGATTCCTTGTAT
GGGAACTGGAAGAGCTTATTCCATAA

Upstream 100 bases:

>100_bases
GTCAGTTTGTAAGCGTGCTGCATAAATTTCTCCATGCTTTAGCGAGTCCAGAATTCCCAGGAGAATGATTATAAATATAA
TTATTACAAAAATAATCATT

Downstream 100 bases:

>100_bases
TATCAAAAAAGACAATTGACCTCTATCAAGTCCGGATCCAATGCGGGCGGTTTATAGGAAAGGATGAGGCGGATAATTTT
ACATGCGGTATGACGACCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MQFYNRQKELKLMELLDQGKPSFFVITGKRRVGKTELIKQFTRNRKALYLFVDSNKSINILMDEFDRLLKEKLDLPDYIK
VDEPENFLKFITSYDRDLVIAIDEFQRFQKVYPSFITQLQRYWDMKPDNCRIFLIVSGSSIGMIRKIFIEEQAPLFKRAD
NILTIKPFTVLETFEMLDGMGIKNPEEKLNLYFLFGGTVYYYRLFEKYQCTGFDDALEKLIFSEFAPLKNEVREILIEEF
GKEHSTYYEIISAISQGRCSMSEISDMTHVSSSSLSPYFYDLIDLLGVVEHRIPVMDNPEKSKRGRYFLKDNFFRFYGRF
IYPMYSRYMAGNYSPMLEKVRKEWQSYTGKIFEDIVHELLVEKMISDYPELGSWWNRKGDEIDILGVDHRGRKSLVIEVK
NKELAENEAREILELTLDKTKLVKGISGQKLKVGIVAQKVKGRKNLEDDGFLVWELEELIP

Sequences:

>Translated_461_residues
MQFYNRQKELKLMELLDQGKPSFFVITGKRRVGKTELIKQFTRNRKALYLFVDSNKSINILMDEFDRLLKEKLDLPDYIK
VDEPENFLKFITSYDRDLVIAIDEFQRFQKVYPSFITQLQRYWDMKPDNCRIFLIVSGSSIGMIRKIFIEEQAPLFKRAD
NILTIKPFTVLETFEMLDGMGIKNPEEKLNLYFLFGGTVYYYRLFEKYQCTGFDDALEKLIFSEFAPLKNEVREILIEEF
GKEHSTYYEIISAISQGRCSMSEISDMTHVSSSSLSPYFYDLIDLLGVVEHRIPVMDNPEKSKRGRYFLKDNFFRFYGRF
IYPMYSRYMAGNYSPMLEKVRKEWQSYTGKIFEDIVHELLVEKMISDYPELGSWWNRKGDEIDILGVDHRGRKSLVIEVK
NKELAENEAREILELTLDKTKLVKGISGQKLKVGIVAQKVKGRKNLEDDGFLVWELEELIP
>Mature_461_residues
MQFYNRQKELKLMELLDQGKPSFFVITGKRRVGKTELIKQFTRNRKALYLFVDSNKSINILMDEFDRLLKEKLDLPDYIK
VDEPENFLKFITSYDRDLVIAIDEFQRFQKVYPSFITQLQRYWDMKPDNCRIFLIVSGSSIGMIRKIFIEEQAPLFKRAD
NILTIKPFTVLETFEMLDGMGIKNPEEKLNLYFLFGGTVYYYRLFEKYQCTGFDDALEKLIFSEFAPLKNEVREILIEEF
GKEHSTYYEIISAISQGRCSMSEISDMTHVSSSSLSPYFYDLIDLLGVVEHRIPVMDNPEKSKRGRYFLKDNFFRFYGRF
IYPMYSRYMAGNYSPMLEKVRKEWQSYTGKIFEDIVHELLVEKMISDYPELGSWWNRKGDEIDILGVDHRGRKSLVIEVK
NKELAENEAREILELTLDKTKLVKGISGQKLKVGIVAQKVKGRKNLEDDGFLVWELEELIP

Specific function: Unknown

COG id: COG1672

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011579
- InterPro:   IPR004256
- InterPro:   IPR011335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01637 Arch_ATPase; PF03008 DUF234 [H]

EC number: NA

Molecular weight: Translated: 54418; Mature: 54418

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFYNRQKELKLMELLDQGKPSFFVITGKRRVGKTELIKQFTRNRKALYLFVDSNKSINI
CCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCEEH
LMDEFDRLLKEKLDLPDYIKVDEPENFLKFITSYDRDLVIAIDEFQRFQKVYPSFITQLQ
HHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHH
RYWDMKPDNCRIFLIVSGSSIGMIRKIFIEEQAPLFKRADNILTIKPFTVLETFEMLDGM
HHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHCCCCEEEECCHHHHHHHHHHCCC
GIKNPEEKLNLYFLFGGTVYYYRLFEKYQCTGFDDALEKLIFSEFAPLKNEVREILIEEF
CCCCHHHHEEEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
GKEHSTYYEIISAISQGRCSMSEISDMTHVSSSSLSPYFYDLIDLLGVVEHRIPVMDNPE
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
KSKRGRYFLKDNFFRFYGRFIYPMYSRYMAGNYSPMLEKVRKEWQSYTGKIFEDIVHELL
HHHCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VEKMISDYPELGSWWNRKGDEIDILGVDHRGRKSLVIEVKNKELAENEAREILELTLDKT
HHHHHHCCHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
KLVKGISGQKLKVGIVAQKVKGRKNLEDDGFLVWELEELIP
HHHCCCCCCEEEEEHHHHHHCCCCCCCCCCEEEEEHHHHCC
>Mature Secondary Structure
MQFYNRQKELKLMELLDQGKPSFFVITGKRRVGKTELIKQFTRNRKALYLFVDSNKSINI
CCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCEEH
LMDEFDRLLKEKLDLPDYIKVDEPENFLKFITSYDRDLVIAIDEFQRFQKVYPSFITQLQ
HHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHH
RYWDMKPDNCRIFLIVSGSSIGMIRKIFIEEQAPLFKRADNILTIKPFTVLETFEMLDGM
HHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHCCCCEEEECCHHHHHHHHHHCCC
GIKNPEEKLNLYFLFGGTVYYYRLFEKYQCTGFDDALEKLIFSEFAPLKNEVREILIEEF
CCCCHHHHEEEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
GKEHSTYYEIISAISQGRCSMSEISDMTHVSSSSLSPYFYDLIDLLGVVEHRIPVMDNPE
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
KSKRGRYFLKDNFFRFYGRFIYPMYSRYMAGNYSPMLEKVRKEWQSYTGKIFEDIVHELL
HHHCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VEKMISDYPELGSWWNRKGDEIDILGVDHRGRKSLVIEVKNKELAENEAREILELTLDKT
HHHHHHCCHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
KLVKGISGQKLKVGIVAQKVKGRKNLEDDGFLVWELEELIP
HHHCCCCCCEEEEEHHHHHHCCCCCCCCCCEEEEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]