Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226264
Identifier: 21226264
GI number: 21226264
Start: 208431
End: 209816
Strand: Direct
Name: 21226264
Synonym: MM_0162
Alternate gene names: NA
Gene position: 208431-209816 (Clockwise)
Preceding gene: 21226261
Following gene: 21226265
Centisome position: 5.09
GC content: 42.5
Gene sequence:
>1386_bases ATGCAATTCTACAACCGGCAGAAAGAGCTTAAACTTATGGAACTGCTCGATCAGGGGAAACCATCTTTTTTTGTCATAAC CGGCAAAAGAAGGGTAGGAAAAACCGAGCTGATCAAGCAGTTCACACGGAACAGGAAAGCGCTGTATCTTTTCGTTGACA GTAACAAAAGCATTAACATTCTGATGGACGAGTTCGACCGGCTTTTAAAGGAGAAACTGGACCTGCCGGATTACATAAAA GTCGATGAACCTGAGAATTTCCTCAAATTCATTACCTCTTATGACAGGGACCTGGTAATAGCGATTGATGAATTCCAGAG GTTCCAGAAAGTCTACCCATCTTTCATTACTCAGCTGCAGCGATACTGGGACATGAAGCCGGACAATTGCAGAATCTTTC TTATCGTTTCCGGGTCTTCTATTGGCATGATAAGAAAAATCTTCATTGAGGAACAGGCTCCGCTCTTCAAACGTGCCGAT AATATTCTGACCATAAAGCCCTTTACGGTCCTTGAGACATTTGAGATGCTCGATGGCATGGGTATAAAAAATCCGGAAGA AAAACTGAATCTATACTTCCTTTTCGGAGGGACGGTGTATTACTATCGCCTGTTTGAAAAGTATCAGTGCACAGGATTTG ATGATGCCCTTGAAAAGCTGATATTCAGCGAGTTTGCACCGCTTAAAAATGAAGTGAGGGAAATTCTGATAGAGGAATTT GGGAAGGAGCACTCCACATATTATGAAATAATCTCAGCGATATCACAGGGAAGATGCTCGATGAGCGAGATCTCAGACAT GACACATGTTTCTTCGAGCTCATTGTCACCTTATTTTTACGATCTCATAGACCTGCTGGGAGTGGTAGAACACCGGATAC CAGTCATGGACAATCCTGAAAAAAGCAAGAGAGGACGGTATTTTCTTAAGGATAATTTCTTCAGGTTCTATGGTCGCTTC ATATATCCTATGTACAGCCGGTATATGGCAGGCAATTATTCTCCCATGCTGGAAAAGGTCCGGAAGGAATGGCAGAGTTA CACAGGCAAGATATTCGAGGACATAGTTCATGAACTGCTGGTTGAAAAGATGATCAGCGATTATCCGGAGCTTGGGAGCT GGTGGAACCGGAAAGGAGATGAGATTGACATTCTTGGAGTAGATCACCGGGGGAGAAAATCCCTGGTAATTGAAGTCAAG AATAAAGAACTGGCTGAAAACGAAGCCAGAGAGATTCTGGAATTAACACTCGATAAAACAAAATTAGTAAAAGGAATATC CGGTCAAAAATTGAAAGTCGGGATAGTGGCTCAAAAGGTCAAAGGTAGAAAGAACCTGGAAGATGATGGATTCCTTGTAT GGGAACTGGAAGAGCTTATTCCATAA
Upstream 100 bases:
>100_bases GTCAGTTTGTAAGCGTGCTGCATAAATTTCTCCATGCTTTAGCGAGTCCAGAATTCCCAGGAGAATGATTATAAATATAA TTATTACAAAAATAATCATT
Downstream 100 bases:
>100_bases TATCAAAAAAGACAATTGACCTCTATCAAGTCCGGATCCAATGCGGGCGGTTTATAGGAAAGGATGAGGCGGATAATTTT ACATGCGGTATGACGACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MQFYNRQKELKLMELLDQGKPSFFVITGKRRVGKTELIKQFTRNRKALYLFVDSNKSINILMDEFDRLLKEKLDLPDYIK VDEPENFLKFITSYDRDLVIAIDEFQRFQKVYPSFITQLQRYWDMKPDNCRIFLIVSGSSIGMIRKIFIEEQAPLFKRAD NILTIKPFTVLETFEMLDGMGIKNPEEKLNLYFLFGGTVYYYRLFEKYQCTGFDDALEKLIFSEFAPLKNEVREILIEEF GKEHSTYYEIISAISQGRCSMSEISDMTHVSSSSLSPYFYDLIDLLGVVEHRIPVMDNPEKSKRGRYFLKDNFFRFYGRF IYPMYSRYMAGNYSPMLEKVRKEWQSYTGKIFEDIVHELLVEKMISDYPELGSWWNRKGDEIDILGVDHRGRKSLVIEVK NKELAENEAREILELTLDKTKLVKGISGQKLKVGIVAQKVKGRKNLEDDGFLVWELEELIP
Sequences:
>Translated_461_residues MQFYNRQKELKLMELLDQGKPSFFVITGKRRVGKTELIKQFTRNRKALYLFVDSNKSINILMDEFDRLLKEKLDLPDYIK VDEPENFLKFITSYDRDLVIAIDEFQRFQKVYPSFITQLQRYWDMKPDNCRIFLIVSGSSIGMIRKIFIEEQAPLFKRAD NILTIKPFTVLETFEMLDGMGIKNPEEKLNLYFLFGGTVYYYRLFEKYQCTGFDDALEKLIFSEFAPLKNEVREILIEEF GKEHSTYYEIISAISQGRCSMSEISDMTHVSSSSLSPYFYDLIDLLGVVEHRIPVMDNPEKSKRGRYFLKDNFFRFYGRF IYPMYSRYMAGNYSPMLEKVRKEWQSYTGKIFEDIVHELLVEKMISDYPELGSWWNRKGDEIDILGVDHRGRKSLVIEVK NKELAENEAREILELTLDKTKLVKGISGQKLKVGIVAQKVKGRKNLEDDGFLVWELEELIP >Mature_461_residues MQFYNRQKELKLMELLDQGKPSFFVITGKRRVGKTELIKQFTRNRKALYLFVDSNKSINILMDEFDRLLKEKLDLPDYIK VDEPENFLKFITSYDRDLVIAIDEFQRFQKVYPSFITQLQRYWDMKPDNCRIFLIVSGSSIGMIRKIFIEEQAPLFKRAD NILTIKPFTVLETFEMLDGMGIKNPEEKLNLYFLFGGTVYYYRLFEKYQCTGFDDALEKLIFSEFAPLKNEVREILIEEF GKEHSTYYEIISAISQGRCSMSEISDMTHVSSSSLSPYFYDLIDLLGVVEHRIPVMDNPEKSKRGRYFLKDNFFRFYGRF IYPMYSRYMAGNYSPMLEKVRKEWQSYTGKIFEDIVHELLVEKMISDYPELGSWWNRKGDEIDILGVDHRGRKSLVIEVK NKELAENEAREILELTLDKTKLVKGISGQKLKVGIVAQKVKGRKNLEDDGFLVWELEELIP
Specific function: Unknown
COG id: COG1672
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011579 - InterPro: IPR004256 - InterPro: IPR011335 - InterPro: IPR011991 [H]
Pfam domain/function: PF01637 Arch_ATPase; PF03008 DUF234 [H]
EC number: NA
Molecular weight: Translated: 54418; Mature: 54418
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFYNRQKELKLMELLDQGKPSFFVITGKRRVGKTELIKQFTRNRKALYLFVDSNKSINI CCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCEEH LMDEFDRLLKEKLDLPDYIKVDEPENFLKFITSYDRDLVIAIDEFQRFQKVYPSFITQLQ HHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHH RYWDMKPDNCRIFLIVSGSSIGMIRKIFIEEQAPLFKRADNILTIKPFTVLETFEMLDGM HHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHCCCCEEEECCHHHHHHHHHHCCC GIKNPEEKLNLYFLFGGTVYYYRLFEKYQCTGFDDALEKLIFSEFAPLKNEVREILIEEF CCCCHHHHEEEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH GKEHSTYYEIISAISQGRCSMSEISDMTHVSSSSLSPYFYDLIDLLGVVEHRIPVMDNPE CCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC KSKRGRYFLKDNFFRFYGRFIYPMYSRYMAGNYSPMLEKVRKEWQSYTGKIFEDIVHELL HHHCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VEKMISDYPELGSWWNRKGDEIDILGVDHRGRKSLVIEVKNKELAENEAREILELTLDKT HHHHHHCCHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH KLVKGISGQKLKVGIVAQKVKGRKNLEDDGFLVWELEELIP HHHCCCCCCEEEEEHHHHHHCCCCCCCCCCEEEEEHHHHCC >Mature Secondary Structure MQFYNRQKELKLMELLDQGKPSFFVITGKRRVGKTELIKQFTRNRKALYLFVDSNKSINI CCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCEEH LMDEFDRLLKEKLDLPDYIKVDEPENFLKFITSYDRDLVIAIDEFQRFQKVYPSFITQLQ HHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHH RYWDMKPDNCRIFLIVSGSSIGMIRKIFIEEQAPLFKRADNILTIKPFTVLETFEMLDGM HHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHCCCCEEEECCHHHHHHHHHHCCC GIKNPEEKLNLYFLFGGTVYYYRLFEKYQCTGFDDALEKLIFSEFAPLKNEVREILIEEF CCCCHHHHEEEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH GKEHSTYYEIISAISQGRCSMSEISDMTHVSSSSLSPYFYDLIDLLGVVEHRIPVMDNPE CCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC KSKRGRYFLKDNFFRFYGRFIYPMYSRYMAGNYSPMLEKVRKEWQSYTGKIFEDIVHELL HHHCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VEKMISDYPELGSWWNRKGDEIDILGVDHRGRKSLVIEVKNKELAENEAREILELTLDKT HHHHHHCCHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH KLVKGISGQKLKVGIVAQKVKGRKNLEDDGFLVWELEELIP HHHCCCCCCEEEEEHHHHHHCCCCCCCCCCEEEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]