| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226262
Identifier: 21226262
GI number: 21226262
Start: 207711
End: 207938
Strand: Reverse
Name: 21226262
Synonym: MM_0160
Alternate gene names: NA
Gene position: 207938-207711 (Counterclockwise)
Preceding gene: 21226263
Following gene: 21226257
Centisome position: 5.08
GC content: 46.05
Gene sequence:
>228_bases ATGCCAAAACTTCCCACGCCCTCAGCTCTTGAGGTCATCAAGGCTCTCAACAGCCAGGGTTTTCAGGTCATATCTCAGAA GGGCAACCATATCAAAATGAAAAAGAAGGCTCCGGATAAAATTCTCGTTGTTATTGTCCCGGATCATCCCGAAATTCCGT CAGGGACTTTGAAATCTATAATCAGGCAAGCCGGAATGACCGATGACGAGTTCGTCAAGCTTCTGTAA
Upstream 100 bases:
>100_bases GAGAACCTGAAGGAAGCAATTGAACTCTACCTCGAAGACGAGGACGTCAAAATCCCTGCAGCCAGACAGGTTTTTACCAC AACGGTAGAGGTCTCTTCCC
Downstream 100 bases:
>100_bases TCAAATAAAGGTCAAAATTTTTTAGTTAAGAATTCGATTACCTCTTCCTCGGATTTCCTATATCGAGATTCAGGAGGTTT GGATTTTTCATTCTTTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MPKLPTPSALEVIKALNSQGFQVISQKGNHIKMKKKAPDKILVVIVPDHPEIPSGTLKSIIRQAGMTDDEFVKLL
Sequences:
>Translated_75_residues MPKLPTPSALEVIKALNSQGFQVISQKGNHIKMKKKAPDKILVVIVPDHPEIPSGTLKSIIRQAGMTDDEFVKLL >Mature_74_residues PKLPTPSALEVIKALNSQGFQVISQKGNHIKMKKKAPDKILVVIVPDHPEIPSGTLKSIIRQAGMTDDEFVKLL
Specific function: Unknown
COG id: COG1724
COG function: function code N; Predicted periplasmic or secreted lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8230; Mature: 8099
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKLPTPSALEVIKALNSQGFQVISQKGNHIKMKKKAPDKILVVIVPDHPEIPSGTLKSI CCCCCCCHHHHHHHHHCCCCHHHHHCCCCEEEECCCCCCEEEEEEECCCCCCCCHHHHHH IRQAGMTDDEFVKLL HHHCCCCCHHHHCCC >Mature Secondary Structure PKLPTPSALEVIKALNSQGFQVISQKGNHIKMKKKAPDKILVVIVPDHPEIPSGTLKSI CCCCCCHHHHHHHHHCCCCHHHHHCCCCEEEECCCCCCEEEEEEECCCCCCCCHHHHHH IRQAGMTDDEFVKLL HHHCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA