Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226159
Identifier: 21226159
GI number: 21226159
Start: 77008
End: 77289
Strand: Direct
Name: 21226159
Synonym: MM_0057
Alternate gene names: NA
Gene position: 77008-77289 (Clockwise)
Preceding gene: 21226156
Following gene: 21226160
Centisome position: 1.88
GC content: 45.39
Gene sequence:
>282_bases ATGAGTGAACACGATGAATTAAAAGATAAGATGTACGAATGGACAGAAAAATATGCAAACAAGGCAGGCTTCAAGCTTAA TCCGGACAAAGAAGCCCTTGACTACGTCCTTGACGGGCTCGCTTCAAGGGTAGAAAGGTTCGGCAGGCGTTATTGCCCCT GCAGGATAGTAACCGGGGATGAGAGCGAGGACAAGAAAATAGTTTGCCCCTGCGTATACCATAAGGATGAAATTGAAAAA GACGGGAACTGTCACTGCGAACTTTTCTTTAAGCCTTCCTGA
Upstream 100 bases:
>100_bases TGTAAGAACAAAAATATTCCTGACCATAGAACTATACTTACGTATACGAGATCCTGTAAATAACCAGTATCACTCCTACA AAAACAGGAGGGAATTCTAC
Downstream 100 bases:
>100_bases TCCGCTGCTATATCAGACATTCTCGGAAAGCAGGTGTCAAATACAGCTGGAGAAGGCGGGAGAGGAAATACCTGAAAGTT TTTCCTTTCTTTCAGCCGCT
Product: ferredoxin-thioredoxin reductase, catalytic chain
Products: NA
Alternate protein names: Ferredoxin Thioredoxin Reductase Beta Chain; Thioredoxin-Related Protein; Rubredoxin; Ferredoxin-Thioredoxin Reductase Catalytic Subunit; Ferredoxin-Glutaredoxin Reductase; Ferredoxin Thioredoxin Reductase Subunit Beta; Ferredoxin-Thioredoxin Reductase
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MSEHDELKDKMYEWTEKYANKAGFKLNPDKEALDYVLDGLASRVERFGRRYCPCRIVTGDESEDKKIVCPCVYHKDEIEK DGNCHCELFFKPS
Sequences:
>Translated_93_residues MSEHDELKDKMYEWTEKYANKAGFKLNPDKEALDYVLDGLASRVERFGRRYCPCRIVTGDESEDKKIVCPCVYHKDEIEK DGNCHCELFFKPS >Mature_92_residues SEHDELKDKMYEWTEKYANKAGFKLNPDKEALDYVLDGLASRVERFGRRYCPCRIVTGDESEDKKIVCPCVYHKDEIEKD GNCHCELFFKPS
Specific function: Unknown
COG id: COG4802
COG function: function code C; Ferredoxin-thioredoxin reductase, catalytic subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10913; Mature: 10782
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 6.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEHDELKDKMYEWTEKYANKAGFKLNPDKEALDYVLDGLASRVERFGRRYCPCRIVTGD CCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC ESEDKKIVCPCVYHKDEIEKDGNCHCELFFKPS CCCCCEEEECEECCCCCCCCCCCCEEEEEECCC >Mature Secondary Structure SEHDELKDKMYEWTEKYANKAGFKLNPDKEALDYVLDGLASRVERFGRRYCPCRIVTGD CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC ESEDKKIVCPCVYHKDEIEKDGNCHCELFFKPS CCCCCEEEECEECCCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA