Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226148
Identifier: 21226148
GI number: 21226148
Start: 60558
End: 61070
Strand: Direct
Name: 21226148
Synonym: MM_0046
Alternate gene names: NA
Gene position: 60558-61070 (Clockwise)
Preceding gene: 21226147
Following gene: 21226153
Centisome position: 1.48
GC content: 50.1
Gene sequence:
>513_bases GTGACAATCCATAGAGCTATGACCAGCAGCAAACCAGGAGATTCCGTTTCAGCTTCGCATACTTCTGACAGTGCAGCCAG TGAAAACCATAAAAAAATACCTGCCGGACAGCTTACTCCTGTTTACGAATCAGCTACTTTCTCAAGCCCTTCTCTTGACC AGTTCAGGGGAATTTTACCTGACTTCAATAACAGGCTCTCTCCCGAAAGAGACCTCGGGCTTTCTTCTTCAGGGGTTTCC CGCCTGAGCCCTGAACCCCTTCCAAGGCTTGTTTCGGACTCTGCCCTCGGGCTTGTCTCCTGTTCTCTTTCCAGCCCTCT CACAGGGCTTAAAGCCGAAAACCCCGAAGTTCCTGTAGGGTTGGGGCTTGAGATTAAGCCTGACCTTGCAGGAAGAACTC TTTCAGGAAATAAAACTGATTCTCTCACCATTTGCGCAGACCTTCCTGTGGGACCTGTCAGGAGCAGGATGACCACTCTC AGGCCATCTGAAAGCGAAACAAAAGAGCAGTGA
Upstream 100 bases:
>100_bases GTCCGTACATATTCCAGTTCCTGATCTGCCTTGAATGCAAATCTCCTTCCACATTACAATGAAAAAAGAAGGAAAGCCCT CGTATAATTGATATACCATC
Downstream 100 bases:
>100_bases AGTGGAAAAACAGAAATAAAGAGCAGGAATAAGAAAAAGAGAACACATAAGAAAATAGAGTGTACAAAAAGAGAGAGCAC AAAAATAGGGAGTATATAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MTIHRAMTSSKPGDSVSASHTSDSAASENHKKIPAGQLTPVYESATFSSPSLDQFRGILPDFNNRLSPERDLGLSSSGVS RLSPEPLPRLVSDSALGLVSCSLSSPLTGLKAENPEVPVGLGLEIKPDLAGRTLSGNKTDSLTICADLPVGPVRSRMTTL RPSESETKEQ
Sequences:
>Translated_170_residues MTIHRAMTSSKPGDSVSASHTSDSAASENHKKIPAGQLTPVYESATFSSPSLDQFRGILPDFNNRLSPERDLGLSSSGVS RLSPEPLPRLVSDSALGLVSCSLSSPLTGLKAENPEVPVGLGLEIKPDLAGRTLSGNKTDSLTICADLPVGPVRSRMTTL RPSESETKEQ >Mature_169_residues TIHRAMTSSKPGDSVSASHTSDSAASENHKKIPAGQLTPVYESATFSSPSLDQFRGILPDFNNRLSPERDLGLSSSGVSR LSPEPLPRLVSDSALGLVSCSLSSPLTGLKAENPEVPVGLGLEIKPDLAGRTLSGNKTDSLTICADLPVGPVRSRMTTLR PSESETKEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17897; Mature: 17766
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIHRAMTSSKPGDSVSASHTSDSAASENHKKIPAGQLTPVYESATFSSPSLDQFRGILP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC DFNNRLSPERDLGLSSSGVSRLSPEPLPRLVSDSALGLVSCSLSSPLTGLKAENPEVPVG CCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCC LGLEIKPDLAGRTLSGNKTDSLTICADLPVGPVRSRMTTLRPSESETKEQ CCCEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TIHRAMTSSKPGDSVSASHTSDSAASENHKKIPAGQLTPVYESATFSSPSLDQFRGILP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC DFNNRLSPERDLGLSSSGVSRLSPEPLPRLVSDSALGLVSCSLSSPLTGLKAENPEVPVG CCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCC LGLEIKPDLAGRTLSGNKTDSLTICADLPVGPVRSRMTTLRPSESETKEQ CCCEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA