Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226134
Identifier: 21226134
GI number: 21226134
Start: 36605
End: 36829
Strand: Direct
Name: 21226134
Synonym: MM_0032
Alternate gene names: NA
Gene position: 36605-36829 (Clockwise)
Preceding gene: 21226133
Following gene: 21226138
Centisome position: 0.89
GC content: 46.22
Gene sequence:
>225_bases ATGTCTGGACTACCGATAATTTCAGGTATGCAGGCAATCAAAGCCTTTTCTAAAGCTGGCTGGCTCCCGCACCGACAGGT GGGCAGTCATGTTGTCCTTAGAAAGGAAGGATCAAAAGTTACGCTGACTGTCCCGAAGCACAAAGAACTGAAGCCGGGCC TTTTAAGAAATTTGATAAAAGCTTCAGGGCTGACGGTAGAAGAATTCGAAGCTCTTTTGAAGTGA
Upstream 100 bases:
>100_bases TAAAGAAGCGATTCAGGCCTGCCTGGAATCGCTTGCAGAAGACGACTTGCAGGAATGCATTGGAAAATCCTCCTGCAGAG TTGTTGATGTGGTTGCTTAA
Downstream 100 bases:
>100_bases AATTTTTTGATTTGATGATTTTTCCTGCCGGCGGTCTGCTTAAATCTGCCCCGAATACATTTGTTAAGATAAAGTTAAGA AAAGCGAAATTGAAAAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: YcfA-Like
Number of amino acids: Translated: 74; Mature: 73
Protein sequence:
>74_residues MSGLPIISGMQAIKAFSKAGWLPHRQVGSHVVLRKEGSKVTLTVPKHKELKPGLLRNLIKASGLTVEEFEALLK
Sequences:
>Translated_74_residues MSGLPIISGMQAIKAFSKAGWLPHRQVGSHVVLRKEGSKVTLTVPKHKELKPGLLRNLIKASGLTVEEFEALLK >Mature_73_residues SGLPIISGMQAIKAFSKAGWLPHRQVGSHVVLRKEGSKVTLTVPKHKELKPGLLRNLIKASGLTVEEFEALLK
Specific function: Unknown
COG id: COG1724
COG function: function code N; Predicted periplasmic or secreted lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8072; Mature: 7941
Theoretical pI: Translated: 11.08; Mature: 11.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLPIISGMQAIKAFSKAGWLPHRQVGSHVVLRKEGSKVTLTVPKHKELKPGLLRNLIK CCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCHHHHHHHHH ASGLTVEEFEALLK HCCCCHHHHHHHHC >Mature Secondary Structure SGLPIISGMQAIKAFSKAGWLPHRQVGSHVVLRKEGSKVTLTVPKHKELKPGLLRNLIK CCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCHHHHHHHHH ASGLTVEEFEALLK HCCCCHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA