Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226131
Identifier: 21226131
GI number: 21226131
Start: 33708
End: 34109
Strand: Direct
Name: 21226131
Synonym: MM_0029
Alternate gene names: NA
Gene position: 33708-34109 (Clockwise)
Preceding gene: 21226130
Following gene: 21226133
Centisome position: 0.82
GC content: 34.83
Gene sequence:
>402_bases TTGGACGAAGAGCAAAAAGATAGAATTCTAATAGTTTTAACAATACTGGTAGCAATACTTGTTTTTGGCATTAGTCATTA TTTAAGTCTTGATGATGAATATGTTTTTGGAGCTTCCGTATCAGATGAATCTGTTTTTGAGGTCAACCTGACAACCGGTA TTAAATATAAGTTTTTAATCGATGGTGGGCTTATTGGTGGCCCTGTTAGTATCGATGTTACAATAAGCAAAGGTTCTTAC GTTCCTTTTGATGAAAGCTTCAGGACAGATCCTATGGATACATTCACGGTTTATTATCCTTATGAGCCGATGTTTACCGT AAAAGAAAATGGTACTTATCAGGTTCATGTCAACCCAAGTTCTGGATCATGTAAAATTGCAATTTTTGACACAAACAGTT AA
Upstream 100 bases:
>100_bases AGTTTATATACGGAAGATTTAAGATACTCTGAAGCTCAAAAATGAGTAAAGGAATTTAGCTATTCACAATGAATCCATCT TCTGTGAGGGGCGCAGAATA
Downstream 100 bases:
>100_bases AACTTATTAAACAATGTAGAGTTACCTTACCTAAATCCTTGGAATGATCTCGGTTTAACTTTTGAAAGGTCTAATATGTC GGATGATCAGTACACAGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MDEEQKDRILIVLTILVAILVFGISHYLSLDDEYVFGASVSDESVFEVNLTTGIKYKFLIDGGLIGGPVSIDVTISKGSY VPFDESFRTDPMDTFTVYYPYEPMFTVKENGTYQVHVNPSSGSCKIAIFDTNS
Sequences:
>Translated_133_residues MDEEQKDRILIVLTILVAILVFGISHYLSLDDEYVFGASVSDESVFEVNLTTGIKYKFLIDGGLIGGPVSIDVTISKGSY VPFDESFRTDPMDTFTVYYPYEPMFTVKENGTYQVHVNPSSGSCKIAIFDTNS >Mature_133_residues MDEEQKDRILIVLTILVAILVFGISHYLSLDDEYVFGASVSDESVFEVNLTTGIKYKFLIDGGLIGGPVSIDVTISKGSY VPFDESFRTDPMDTFTVYYPYEPMFTVKENGTYQVHVNPSSGSCKIAIFDTNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14786; Mature: 14786
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEEQKDRILIVLTILVAILVFGISHYLSLDDEYVFGASVSDESVFEVNLTTGIKYKFLI CCCCCCCCEEEEHHHHHHHHHHHHHHEECCCCCEEEECCCCCCEEEEEEECCCCEEEEEE DGGLIGGPVSIDVTISKGSYVPFDESFRTDPMDTFTVYYPYEPMFTVKENGTYQVHVNPS ECCEECCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCEEEEEEECC SGSCKIAIFDTNS CCCEEEEEEECCC >Mature Secondary Structure MDEEQKDRILIVLTILVAILVFGISHYLSLDDEYVFGASVSDESVFEVNLTTGIKYKFLI CCCCCCCCEEEEHHHHHHHHHHHHHHEECCCCCEEEECCCCCCEEEEEEECCCCEEEEEE DGGLIGGPVSIDVTISKGSYVPFDESFRTDPMDTFTVYYPYEPMFTVKENGTYQVHVNPS ECCEECCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCEEEEEEECC SGSCKIAIFDTNS CCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA