Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226125

Identifier: 21226125

GI number: 21226125

Start: 26958

End: 27182

Strand: Direct

Name: 21226125

Synonym: MM_0023

Alternate gene names: NA

Gene position: 26958-27182 (Clockwise)

Preceding gene: 21226124

Following gene: 21226126

Centisome position: 0.66

GC content: 43.11

Gene sequence:

>225_bases
ATGTCTGGACTTCCTGTAATTTCCGGAATGCAGGCAATCAAAGCTTTTTATAAAGCTGGCTGGCTCCCTCACCGGCAGGT
AGGAAGTCATGTTGTCCTTAGAAAGGAAGGATCAAAAGTTACGCTGACTGTCCCGAAGCACAAAGAACTGAAGCCGGGCC
TTTTAAGAAATTTGATAAAAGCTTCAGGGCTGACGATAGAAGAATTCGAAGTTCTTTTAAAGTAA

Upstream 100 bases:

>100_bases
TAAAGAAGCGATTCAGGCCTGCCTGGAATCGCTTGCAGAAGACGACTTGCAGGAATGCATTGGAAAATCTTCCTGTAGAG
TTGTCGATGTGGTTGCTTAA

Downstream 100 bases:

>100_bases
GATTTTTTTGTTTGGGTACTTTACCGAGTGGACTCTATTTGTCAGGAGATGTTTTTCTTACCCTGAGTTACTTCAGTTTA
AATATACTTTTTCCTGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: YcfA-Like

Number of amino acids: Translated: 74; Mature: 73

Protein sequence:

>74_residues
MSGLPVISGMQAIKAFYKAGWLPHRQVGSHVVLRKEGSKVTLTVPKHKELKPGLLRNLIKASGLTIEEFEVLLK

Sequences:

>Translated_74_residues
MSGLPVISGMQAIKAFYKAGWLPHRQVGSHVVLRKEGSKVTLTVPKHKELKPGLLRNLIKASGLTIEEFEVLLK
>Mature_73_residues
SGLPVISGMQAIKAFYKAGWLPHRQVGSHVVLRKEGSKVTLTVPKHKELKPGLLRNLIKASGLTIEEFEVLLK

Specific function: Unknown

COG id: COG1724

COG function: function code N; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8176; Mature: 8045

Theoretical pI: Translated: 10.91; Mature: 10.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLPVISGMQAIKAFYKAGWLPHRQVGSHVVLRKEGSKVTLTVPKHKELKPGLLRNLIK
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCHHHHHHHHH
ASGLTIEEFEVLLK
HCCCCHHHHHHHCC
>Mature Secondary Structure 
SGLPVISGMQAIKAFYKAGWLPHRQVGSHVVLRKEGSKVTLTVPKHKELKPGLLRNLIK
CCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCHHHHHHHHH
ASGLTIEEFEVLLK
HCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA