Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212224532

Identifier: 212224532

GI number: 212224532

Start: 1254314

End: 1254889

Strand: Reverse

Name: 212224532

Synonym: TON_1381

Alternate gene names: NA

Gene position: 1254889-1254314 (Counterclockwise)

Preceding gene: 212224535

Following gene: 212224528

Centisome position: 67.92

GC content: 42.71

Gene sequence:

>576_bases
ATGAAAGTCTTCAAGGACCGAGGCGTCAGTGGACTGAAGAAGTTCTCCGACAGACAGGGTGCGTCAGAACTGCTACAATA
TATAAATGAAAATAGTGTTGATGCTGTTATAGTCACGAGTATTGACAGGATTGCACGTGATAGTCTTGACCTGAAGAATA
TGATTGAGTATTTCAAAAATAATAACATAAGGATAATAACACTCTCAGATTCCGAGGGCTGGATTAACTATTTGTTTGAT
GACAGTGTTGATGATGTCTACAAACTGGTAGCAAACATTCTACTTGAAACACTCTCCTTCTTCGCACAGTTCGAATTGAA
GAAAAGGCGCGAGCGCCAGGAGTTGGCATGGGCTAGTGGAAAACAAAAAGGAAGACCGGTCAAGATTACCGATGATGAAC
TACTCGAATACCTAAAGAAGTACAGGAGTAAGGGGCTCAGTTATAAGGCGATATGGGCAATCCTAAACAGCGACCTCGAA
CGCAAGAGAAGGGAGACTATTTCCTATCAGGCATTTATGATGCGGGTGAGGAAACTTCGCGAGGAGGGTAAAATTAGAGA
GGTCATCTCTTCCTGA

Upstream 100 bases:

>100_bases
GACTGCTGTCGGGTATGTCCGCGTCAGCACGAACAAACAAGATGAAGAAAATCAGGTCCGGGCAATCGAGAAGTACTGCC
GAGGACACAATATCCGGCTA

Downstream 100 bases:

>100_bases
CTCTTCTTATTCCTTATTATTCTATTTATGATCTATATGAACAAAATCTATGTCAGAAATGACAGAGAAAAGTTCACTAA
CAATACTGACAATGTCCTAT

Product: protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MKVFKDRGVSGLKKFSDRQGASELLQYINENSVDAVIVTSIDRIARDSLDLKNMIEYFKNNNIRIITLSDSEGWINYLFD
DSVDDVYKLVANILLETLSFFAQFELKKRRERQELAWASGKQKGRPVKITDDELLEYLKKYRSKGLSYKAIWAILNSDLE
RKRRETISYQAFMMRVRKLREEGKIREVISS

Sequences:

>Translated_191_residues
MKVFKDRGVSGLKKFSDRQGASELLQYINENSVDAVIVTSIDRIARDSLDLKNMIEYFKNNNIRIITLSDSEGWINYLFD
DSVDDVYKLVANILLETLSFFAQFELKKRRERQELAWASGKQKGRPVKITDDELLEYLKKYRSKGLSYKAIWAILNSDLE
RKRRETISYQAFMMRVRKLREEGKIREVISS
>Mature_191_residues
MKVFKDRGVSGLKKFSDRQGASELLQYINENSVDAVIVTSIDRIARDSLDLKNMIEYFKNNNIRIITLSDSEGWINYLFD
DSVDDVYKLVANILLETLSFFAQFELKKRRERQELAWASGKQKGRPVKITDDELLEYLKKYRSKGLSYKAIWAILNSDLE
RKRRETISYQAFMMRVRKLREEGKIREVISS

Specific function: Unknown

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22433; Mature: 22433

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVFKDRGVSGLKKFSDRQGASELLQYINENSVDAVIVTSIDRIARDSLDLKNMIEYFKN
CCCCHHCCHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHC
NNIRIITLSDSEGWINYLFDDSVDDVYKLVANILLETLSFFAQFELKKRRERQELAWASG
CCEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KQKGRPVKITDDELLEYLKKYRSKGLSYKAIWAILNSDLERKRRETISYQAFMMRVRKLR
CCCCCCEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEGKIREVISS
HHHHHHHHHCC
>Mature Secondary Structure
MKVFKDRGVSGLKKFSDRQGASELLQYINENSVDAVIVTSIDRIARDSLDLKNMIEYFKN
CCCCHHCCHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHC
NNIRIITLSDSEGWINYLFDDSVDDVYKLVANILLETLSFFAQFELKKRRERQELAWASG
CCEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KQKGRPVKITDDELLEYLKKYRSKGLSYKAIWAILNSDLERKRRETISYQAFMMRVRKLR
CCCCCCEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEGKIREVISS
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA