Definition | Thermococcus onnurineus NA1, complete genome. |
---|---|
Accession | NC_011529 |
Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is 212224532
Identifier: 212224532
GI number: 212224532
Start: 1254314
End: 1254889
Strand: Reverse
Name: 212224532
Synonym: TON_1381
Alternate gene names: NA
Gene position: 1254889-1254314 (Counterclockwise)
Preceding gene: 212224535
Following gene: 212224528
Centisome position: 67.92
GC content: 42.71
Gene sequence:
>576_bases ATGAAAGTCTTCAAGGACCGAGGCGTCAGTGGACTGAAGAAGTTCTCCGACAGACAGGGTGCGTCAGAACTGCTACAATA TATAAATGAAAATAGTGTTGATGCTGTTATAGTCACGAGTATTGACAGGATTGCACGTGATAGTCTTGACCTGAAGAATA TGATTGAGTATTTCAAAAATAATAACATAAGGATAATAACACTCTCAGATTCCGAGGGCTGGATTAACTATTTGTTTGAT GACAGTGTTGATGATGTCTACAAACTGGTAGCAAACATTCTACTTGAAACACTCTCCTTCTTCGCACAGTTCGAATTGAA GAAAAGGCGCGAGCGCCAGGAGTTGGCATGGGCTAGTGGAAAACAAAAAGGAAGACCGGTCAAGATTACCGATGATGAAC TACTCGAATACCTAAAGAAGTACAGGAGTAAGGGGCTCAGTTATAAGGCGATATGGGCAATCCTAAACAGCGACCTCGAA CGCAAGAGAAGGGAGACTATTTCCTATCAGGCATTTATGATGCGGGTGAGGAAACTTCGCGAGGAGGGTAAAATTAGAGA GGTCATCTCTTCCTGA
Upstream 100 bases:
>100_bases GACTGCTGTCGGGTATGTCCGCGTCAGCACGAACAAACAAGATGAAGAAAATCAGGTCCGGGCAATCGAGAAGTACTGCC GAGGACACAATATCCGGCTA
Downstream 100 bases:
>100_bases CTCTTCTTATTCCTTATTATTCTATTTATGATCTATATGAACAAAATCTATGTCAGAAATGACAGAGAAAAGTTCACTAA CAATACTGACAATGTCCTAT
Product: protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MKVFKDRGVSGLKKFSDRQGASELLQYINENSVDAVIVTSIDRIARDSLDLKNMIEYFKNNNIRIITLSDSEGWINYLFD DSVDDVYKLVANILLETLSFFAQFELKKRRERQELAWASGKQKGRPVKITDDELLEYLKKYRSKGLSYKAIWAILNSDLE RKRRETISYQAFMMRVRKLREEGKIREVISS
Sequences:
>Translated_191_residues MKVFKDRGVSGLKKFSDRQGASELLQYINENSVDAVIVTSIDRIARDSLDLKNMIEYFKNNNIRIITLSDSEGWINYLFD DSVDDVYKLVANILLETLSFFAQFELKKRRERQELAWASGKQKGRPVKITDDELLEYLKKYRSKGLSYKAIWAILNSDLE RKRRETISYQAFMMRVRKLREEGKIREVISS >Mature_191_residues MKVFKDRGVSGLKKFSDRQGASELLQYINENSVDAVIVTSIDRIARDSLDLKNMIEYFKNNNIRIITLSDSEGWINYLFD DSVDDVYKLVANILLETLSFFAQFELKKRRERQELAWASGKQKGRPVKITDDELLEYLKKYRSKGLSYKAIWAILNSDLE RKRRETISYQAFMMRVRKLREEGKIREVISS
Specific function: Unknown
COG id: COG1961
COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22433; Mature: 22433
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVFKDRGVSGLKKFSDRQGASELLQYINENSVDAVIVTSIDRIARDSLDLKNMIEYFKN CCCCHHCCHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHC NNIRIITLSDSEGWINYLFDDSVDDVYKLVANILLETLSFFAQFELKKRRERQELAWASG CCEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KQKGRPVKITDDELLEYLKKYRSKGLSYKAIWAILNSDLERKRRETISYQAFMMRVRKLR CCCCCCEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEGKIREVISS HHHHHHHHHCC >Mature Secondary Structure MKVFKDRGVSGLKKFSDRQGASELLQYINENSVDAVIVTSIDRIARDSLDLKNMIEYFKN CCCCHHCCHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHC NNIRIITLSDSEGWINYLFDDSVDDVYKLVANILLETLSFFAQFELKKRRERQELAWASG CCEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KQKGRPVKITDDELLEYLKKYRSKGLSYKAIWAILNSDLERKRRETISYQAFMMRVRKLR CCCCCCEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEGKIREVISS HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA