Click here to switch to the map view.

The map label for this gene is ygiW [H]

Identifier: 209695867

GI number: 209695867

Start: 2616405

End: 2616770

Strand: Reverse

Name: ygiW [H]

Synonym: VSAL_I2443

Alternate gene names: 209695867

Gene position: 2616770-2616405 (Counterclockwise)

Preceding gene: 209695868

Following gene: 209695864

Centisome position: 78.7

GC content: 36.89

Gene sequence:

>366_bases
ATGAAAAAAATTATATTAGTAAGTGCATTAGTATTGGCATCATCAAGTGCGTTTGCAGCTCAAAACACTCAAGTGGTTAA
AGGTGGTTTCACTGGGCCAAGTACGGTTACAGTGAATACGGTTCAAGTTGCTAAAGAAGCAAAAGATGATACACCAGTGA
CGTTAATTGGCTATATTGTTGCTTCATTAGGTGACGAAGAGTATCAATTTAAAGATGCAACAGGTGAGATGATTGTTGAG
ATTGATCATCGTGATTGGAATGGCATTGAAGCAACGCCTGAAACAAAATTAGTGATTCAAGGTGAAGTTGATAAAGAATG
GAAACATACAGCCGTTGATGTAAATACGGTTCAACTAGCAAAATAA

Upstream 100 bases:

>100_bases
TAGATAATATTGCGAATTCATCTTCATTCATGTTGAGTTCAGCTTACTACTTCTAATATGTAGTCATAGAAATTCATTAA
TCAAATTGGAAATAAATAAA

Downstream 100 bases:

>100_bases
TGAGCTGATTGTTTTCGATGAAAAAGGCCAGAGATAATTCTCTGGCCTTTTTATTTTATAGTGTATTTATTTGATGTTTT
GTCTTACCGCATCGATTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MKKIILVSALVLASSSAFAAQNTQVVKGGFTGPSTVTVNTVQVAKEAKDDTPVTLIGYIVASLGDEEYQFKDATGEMIVE
IDHRDWNGIEATPETKLVIQGEVDKEWKHTAVDVNTVQLAK

Sequences:

>Translated_121_residues
MKKIILVSALVLASSSAFAAQNTQVVKGGFTGPSTVTVNTVQVAKEAKDDTPVTLIGYIVASLGDEEYQFKDATGEMIVE
IDHRDWNGIEATPETKLVIQGEVDKEWKHTAVDVNTVQLAK
>Mature_121_residues
MKKIILVSALVLASSSAFAAQNTQVVKGGFTGPSTVTVNTVQVAKEAKDDTPVTLIGYIVASLGDEEYQFKDATGEMIVE
IDHRDWNGIEATPETKLVIQGEVDKEWKHTAVDVNTVQLAK

Specific function: Unknown

COG id: COG3111

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1709 [H]

Homologues:

Organism=Escherichia coli, GI1789401, Length=127, Percent_Identity=42.5196850393701, Blast_Score=97, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016052
- InterPro:   IPR005220 [H]

Pfam domain/function: PF04076 BOF [H]

EC number: NA

Molecular weight: Translated: 13061; Mature: 13061

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIILVSALVLASSSAFAAQNTQVVKGGFTGPSTVTVNTVQVAKEAKDDTPVTLIGYIV
CCEEEEEEEHHHHCCCCCCCCCCEEEECCCCCCCEEEEEEEEEECCCCCCCCEEHHHHHH
ASLGDEEYQFKDATGEMIVEIDHRDWNGIEATPETKLVIQGEVDKEWKHTAVDVNTVQLA
HHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECEEEEEC
K
C
>Mature Secondary Structure
MKKIILVSALVLASSSAFAAQNTQVVKGGFTGPSTVTVNTVQVAKEAKDDTPVTLIGYIV
CCEEEEEEEHHHHCCCCCCCCCCEEEECCCCCCCEEEEEEEEEECCCCCCCCEEHHHHHH
ASLGDEEYQFKDATGEMIVEIDHRDWNGIEATPETKLVIQGEVDKEWKHTAVDVNTVQLA
HHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECEEEEEC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]