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The map label for this gene is yajC [H]

Identifier: 209695858

GI number: 209695858

Start: 2606558

End: 2606890

Strand: Reverse

Name: yajC [H]

Synonym: VSAL_I2434

Alternate gene names: 209695858

Gene position: 2606890-2606558 (Counterclockwise)

Preceding gene: 209695859

Following gene: 209695857

Centisome position: 78.4

GC content: 39.64

Gene sequence:

>333_bases
ATGAATTTTTTCTCTCAAGCTCATGCAGCTGGTGAAGCAGGAGCGCAAGGCGGTGGCATGCAAATGTTTATCATGCTTGG
TATGTTTGCTGTTATCTTCTACTTTATGATTTATCGCCCACAAGCGAAACGTCAAAAAGAACACAAAAACCTAATGTCTT
CTATGGGCAAAGGTGATGAAGTCCTTACCGCAGGTGGCCTAGTAGGTAAAATTACGAAAGCATCTGACGAAAATGATTAC
ATTGTTATTGAGCTTAACGCAAATAATGAAGTAACCATTAAGAAAGATTTTGTTTCAGCGGTTCTGCCAAAGGGCACTCT
GAAATCACTATAA

Upstream 100 bases:

>100_bases
CCTTTAAAAGCAGAGTAATCACCCATATATCCATAGGGATATGTGTATGGTCACATTTTAGAAACCGGAAATTAGAAACT
AGATACGAGGACGTTATTAA

Downstream 100 bases:

>100_bases
AAACTGTACCCTCTAACTTCGGTTAGAGGGTATTTTTCGTTAAGGACATCGCTGTGTTAAACCGTTTCCCTTTATGGAAG
TATTTGATGGTAGTTTCTGT

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MNFFSQAHAAGEAGAQGGGMQMFIMLGMFAVIFYFMIYRPQAKRQKEHKNLMSSMGKGDEVLTAGGLVGKITKASDENDY
IVIELNANNEVTIKKDFVSAVLPKGTLKSL

Sequences:

>Translated_110_residues
MNFFSQAHAAGEAGAQGGGMQMFIMLGMFAVIFYFMIYRPQAKRQKEHKNLMSSMGKGDEVLTAGGLVGKITKASDENDY
IVIELNANNEVTIKKDFVSAVLPKGTLKSL
>Mature_110_residues
MNFFSQAHAAGEAGAQGGGMQMFIMLGMFAVIFYFMIYRPQAKRQKEHKNLMSSMGKGDEVLTAGGLVGKITKASDENDY
IVIELNANNEVTIKKDFVSAVLPKGTLKSL

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=111, Percent_Identity=63.0630630630631, Blast_Score=136, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 11995; Mature: 11995

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.3 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFFSQAHAAGEAGAQGGGMQMFIMLGMFAVIFYFMIYRPQAKRQKEHKNLMSSMGKGDE
CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
VLTAGGLVGKITKASDENDYIVIELNANNEVTIKKDFVSAVLPKGTLKSL
EEECCCCEEEEECCCCCCCEEEEEECCCCCEEEHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNFFSQAHAAGEAGAQGGGMQMFIMLGMFAVIFYFMIYRPQAKRQKEHKNLMSSMGKGDE
CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
VLTAGGLVGKITKASDENDYIVIELNANNEVTIKKDFVSAVLPKGTLKSL
EEECCCCEEEEECCCCCCCEEEEEECCCCCEEEHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]