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The map label for this gene is yafS [H]

Identifier: 209695825

GI number: 209695825

Start: 2569318

End: 2570061

Strand: Reverse

Name: yafS [H]

Synonym: VSAL_I2400

Alternate gene names: 209695825

Gene position: 2570061-2569318 (Counterclockwise)

Preceding gene: 209695828

Following gene: 209695823

Centisome position: 77.29

GC content: 39.65

Gene sequence:

>744_bases
TTGATTAAGCCAGCACTGCTTGATAAAAAAATTGAAAAACCGCATTCATGGTCGTCTATTCCTCATGGGAACTGGATTCG
TGAGTTGATCCAATCACGCCTTGATGAATGGTGCCCTAAGCTATTTGGTTATCATATGCTAAAAGTGGGTGGTTTGAGTG
CTGAGCTAGATAGTTACTTTTGTAACATTAAACACCAAGTTAGCTTAGATAACAAAAATTCCCTAAAAAATATTTGCGCT
GATTTACCTCAACTCCCTTTTCTTGAGAAAAGTATAGATGCGTGTGTGCTAGCACACCAACTTGATTACTCATCGGACCC
TCATCAATTATTGCGAGAAGTTGATCGTGTTTTAATTCATGATGGCTACGTGATCCTTACTGGATTTAACCCAATGAGTG
CCATTGGTATCGCAAGTTTATTCCCTTGGCGTAAAAACAATTTACCTTGGAGTGGGCGAATGTTTACTCCTCATCGAATT
AAAGATTGGTTAGCGGTGTTAAATTTTGAAGTGGTATATAGCGATTGTTTCGCTTTAGCGCCGTTAACTCGCTATCAAAC
GATTTGGACATGGTTTGAGAATTTAGGGGGAGAGTCGGTAAAACCGGTAAGTGGTATTTATTTTATTGTAGCAAGAAAGC
GGACCTATCCATTAAAAGCGATAAAATCGGCCTGGAAAAAGAAGCCAAAATTGGCTCCAATTTCGGTAGCACAGACTCGT
CAGGGAAAAGTGAACTCAGATTAG

Upstream 100 bases:

>100_bases
ACCAAATGTAATTATCATTAAATGCAGGTATGCTTTTTATTAATAGCATTCACCTTTCTCCAAATTTTTATAAAGTATTA
ATATTTTGTAGGTAACTGTA

Downstream 100 bases:

>100_bases
CCTGGGTAACCTGTATCGTCCTGGGTTGGATTCTCTGCGGCGGTACGTGCTAAATCGTCACACATTTCATTCTCACGATG
ACCAGCATGACCTTTAACCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MIKPALLDKKIEKPHSWSSIPHGNWIRELIQSRLDEWCPKLFGYHMLKVGGLSAELDSYFCNIKHQVSLDNKNSLKNICA
DLPQLPFLEKSIDACVLAHQLDYSSDPHQLLREVDRVLIHDGYVILTGFNPMSAIGIASLFPWRKNNLPWSGRMFTPHRI
KDWLAVLNFEVVYSDCFALAPLTRYQTIWTWFENLGGESVKPVSGIYFIVARKRTYPLKAIKSAWKKKPKLAPISVAQTR
QGKVNSD

Sequences:

>Translated_247_residues
MIKPALLDKKIEKPHSWSSIPHGNWIRELIQSRLDEWCPKLFGYHMLKVGGLSAELDSYFCNIKHQVSLDNKNSLKNICA
DLPQLPFLEKSIDACVLAHQLDYSSDPHQLLREVDRVLIHDGYVILTGFNPMSAIGIASLFPWRKNNLPWSGRMFTPHRI
KDWLAVLNFEVVYSDCFALAPLTRYQTIWTWFENLGGESVKPVSGIYFIVARKRTYPLKAIKSAWKKKPKLAPISVAQTR
QGKVNSD
>Mature_247_residues
MIKPALLDKKIEKPHSWSSIPHGNWIRELIQSRLDEWCPKLFGYHMLKVGGLSAELDSYFCNIKHQVSLDNKNSLKNICA
DLPQLPFLEKSIDACVLAHQLDYSSDPHQLLREVDRVLIHDGYVILTGFNPMSAIGIASLFPWRKNNLPWSGRMFTPHRI
KDWLAVLNFEVVYSDCFALAPLTRYQTIWTWFENLGGESVKPVSGIYFIVARKRTYPLKAIKSAWKKKPKLAPISVAQTR
QGKVNSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081700, Length=244, Percent_Identity=38.1147540983607, Blast_Score=178, Evalue=3e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 28304; Mature: 28304

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKPALLDKKIEKPHSWSSIPHGNWIRELIQSRLDEWCPKLFGYHMLKVGGLSAELDSYF
CCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
CNIKHQVSLDNKNSLKNICADLPQLPFLEKSIDACVLAHQLDYSSDPHQLLREVDRVLIH
HCCEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
DGYVILTGFNPMSAIGIASLFPWRKNNLPWSGRMFTPHRIKDWLAVLNFEVVYSDCFALA
CCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
PLTRYQTIWTWFENLGGESVKPVSGIYFIVARKRTYPLKAIKSAWKKKPKLAPISVAQTR
HHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCEEHHHCC
QGKVNSD
CCCCCCC
>Mature Secondary Structure
MIKPALLDKKIEKPHSWSSIPHGNWIRELIQSRLDEWCPKLFGYHMLKVGGLSAELDSYF
CCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
CNIKHQVSLDNKNSLKNICADLPQLPFLEKSIDACVLAHQLDYSSDPHQLLREVDRVLIH
HCCEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
DGYVILTGFNPMSAIGIASLFPWRKNNLPWSGRMFTPHRIKDWLAVLNFEVVYSDCFALA
CCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
PLTRYQTIWTWFENLGGESVKPVSGIYFIVARKRTYPLKAIKSAWKKKPKLAPISVAQTR
HHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCEEHHHCC
QGKVNSD
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]