| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is sixA [H]
Identifier: 209695604
GI number: 209695604
Start: 2328370
End: 2328840
Strand: Direct
Name: sixA [H]
Synonym: VSAL_I2165
Alternate gene names: 209695604
Gene position: 2328370-2328840 (Clockwise)
Preceding gene: 209695603
Following gene: 209695606
Centisome position: 70.02
GC content: 39.28
Gene sequence:
>471_bases ATGAAAGTATTCATAATGCGTCATGGTGAAGCTGAAGCGTATGCAGCCTCTGATGAAGAGCGTAATTTAACATCGCACGG TGAAAGCCAATCAGCCGTAATTGCCAACTGGTTAATGAAAACACATCAAGTTGCTTTTGATTATGTATTAGTCAGCCCTT ATGTTCGAGCACAACAAACATGGCAAGTGATTAAGCCAATATTAAATGTGGCAAAGGCTAAGGTAGAAATATCAGATGAG ATAACACCTTATGGTGATTCTGATGATGTTGTAGAGTACGTAAAAGCATTAGGCAGCGTTGAAGCGATTAATAATGTATT AATTGTGTCTCATTTGCCATTAGTTGGGTATTTAACGGCTGATTTTGTTCCGGGGATTATGCCGCCAATGTTTCCTACAT CGGCTATTTCGTGTGTTGAGTTTTCTCATCAGACAGGAAAAAGCGATTTATTGTGGTTACAGCAGCCATAA
Upstream 100 bases:
>100_bases ATTATGGCGCTGATACCACAGAGTAGCAAACTCTCTCTTTCCTCTTTTTTCAATTGCTTGCTACTATTGTGAGGTTAGTA ATGATTTTGAGAATGATTCA
Downstream 100 bases:
>100_bases ATAAAGAGAGATAATTTGAGGGTACGTTATTCCCTCAAATTATATTATCGGTCTGGGATCGAAAGTAAAACTAAAATGGC GCCTGCGCCACCAAATTCTA
Product: phosphohistidine phosphatase SixA
Products: NA
Alternate protein names: RX6 [H]
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MKVFIMRHGEAEAYAASDEERNLTSHGESQSAVIANWLMKTHQVAFDYVLVSPYVRAQQTWQVIKPILNVAKAKVEISDE ITPYGDSDDVVEYVKALGSVEAINNVLIVSHLPLVGYLTADFVPGIMPPMFPTSAISCVEFSHQTGKSDLLWLQQP
Sequences:
>Translated_156_residues MKVFIMRHGEAEAYAASDEERNLTSHGESQSAVIANWLMKTHQVAFDYVLVSPYVRAQQTWQVIKPILNVAKAKVEISDE ITPYGDSDDVVEYVKALGSVEAINNVLIVSHLPLVGYLTADFVPGIMPPMFPTSAISCVEFSHQTGKSDLLWLQQP >Mature_156_residues MKVFIMRHGEAEAYAASDEERNLTSHGESQSAVIANWLMKTHQVAFDYVLVSPYVRAQQTWQVIKPILNVAKAKVEISDE ITPYGDSDDVVEYVKALGSVEAINNVLIVSHLPLVGYLTADFVPGIMPPMFPTSAISCVEFSHQTGKSDLLWLQQP
Specific function: Exhibits phosphohistidine phosphatase activity towards the HPt domain of the ArcB sensor involved in the multistep His- Asp phosphorelay [H]
COG id: COG2062
COG function: function code T; Phosphohistidine phosphatase SixA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sixA phosphatase family [H]
Homologues:
Organism=Escherichia coli, GI1788681, Length=156, Percent_Identity=46.1538461538462, Blast_Score=133, Evalue=7e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR004449 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: 3.1.3.- [C]
Molecular weight: Translated: 17292; Mature: 17292
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVFIMRHGEAEAYAASDEERNLTSHGESQSAVIANWLMKTHQVAFDYVLVSPYVRAQQT CEEEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCHHHHHHH WQVIKPILNVAKAKVEISDEITPYGDSDDVVEYVKALGSVEAINNVLIVSHLPLVGYLTA HHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHCCHHHHCCEEEEECCCHHHHHHH DFVPGIMPPMFPTSAISCVEFSHQTGKSDLLWLQQP HHCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECC >Mature Secondary Structure MKVFIMRHGEAEAYAASDEERNLTSHGESQSAVIANWLMKTHQVAFDYVLVSPYVRAQQT CEEEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCHHHHHHH WQVIKPILNVAKAKVEISDEITPYGDSDDVVEYVKALGSVEAINNVLIVSHLPLVGYLTA HHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHCCHHHHCCEEEEECCCHHHHHHH DFVPGIMPPMFPTSAISCVEFSHQTGKSDLLWLQQP HHCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9489669; 9205837; 9278503 [H]